RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
PTPN7-215ENST00000492451 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
PTPN7-215ENST00000492451 ABCC9O60706 1549 aa29.61■■■□□ 2.33
PTPN7-215ENST00000492451 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
PTPN7-215ENST00000492451 NACADO15069 1562 aa28.07■■■□□ 2.08
PTPN7-215ENST00000492451 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
PTPN7-215ENST00000492451 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.04
PTPN7-215ENST00000492451 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
PTPN7-215ENST00000492451 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
PTPN7-215ENST00000492451 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
PTPN7-215ENST00000492451 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
PTPN7-215ENST00000492451 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
PTPN7-215ENST00000492451 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
PTPN7-215ENST00000492451 SCRIBQ14160 1630 aa27.2■■□□□ 1.95
PTPN7-215ENST00000492451 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
PTPN7-215ENST00000492451 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
PTPN7-215ENST00000492451 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
PTPN7-215ENST00000492451 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
PTPN7-215ENST00000492451 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
PTPN7-215ENST00000492451 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
PTPN7-215ENST00000492451 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
PTPN7-215ENST00000492451 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
PTPN7-215ENST00000492451 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
PTPN7-215ENST00000492451 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
PTPN7-215ENST00000492451 MROH2BQ7Z745 1585 aa25.76■■□□□ 1.71
PTPN7-215ENST00000492451 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
PTPN7-215ENST00000492451 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
PTPN7-215ENST00000492451 NESP48681 1621 aa25.55■■□□□ 1.68
PTPN7-215ENST00000492451 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
PTPN7-215ENST00000492451 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
PTPN7-215ENST00000492451 WIZO95785 1651 aa25.45■■□□□ 1.66
PTPN7-215ENST00000492451 CUX2O14529 1486 aa25.32■■□□□ 1.64
PTPN7-215ENST00000492451 LAMC3Q9Y6N6 1575 aa25.28■■□□□ 1.64
PTPN7-215ENST00000492451 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
PTPN7-215ENST00000492451 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
PTPN7-215ENST00000492451 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
PTPN7-215ENST00000492451 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
PTPN7-215ENST00000492451 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
PTPN7-215ENST00000492451 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
PTPN7-215ENST00000492451 CFTRP13569 1480 aa24.96■■□□□ 1.59
PTPN7-215ENST00000492451 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
PTPN7-215ENST00000492451 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
PTPN7-215ENST00000492451 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
PTPN7-215ENST00000492451 WDR62O43379 1518 aa24.87■■□□□ 1.57
PTPN7-215ENST00000492451 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
PTPN7-215ENST00000492451 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
PTPN7-215ENST00000492451 URB2Q14146 1524 aaKnown RBP24.72■■□□□ 1.55
PTPN7-215ENST00000492451 PRDM2Q13029 1718 aa24.7■■□□□ 1.54
PTPN7-215ENST00000492451 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
PTPN7-215ENST00000492451 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
PTPN7-215ENST00000492451 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
PTPN7-215ENST00000492451 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
PTPN7-215ENST00000492451 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
PTPN7-215ENST00000492451 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
PTPN7-215ENST00000492451 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
PTPN7-215ENST00000492451 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
PTPN7-215ENST00000492451 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
PTPN7-215ENST00000492451 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.462e-7■■■■□ 23.6
PTPN7-215ENST00000492451 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
PTPN7-215ENST00000492451 CUX1P39880 1505 aa24.18■■□□□ 1.46
PTPN7-215ENST00000492451 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
PTPN7-215ENST00000492451 SOGA1O94964 1423 aa24.11■■□□□ 1.45
PTPN7-215ENST00000492451 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
PTPN7-215ENST00000492451 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
PTPN7-215ENST00000492451 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
PTPN7-215ENST00000492451 CHD1O14646 1710 aa23.96■■□□□ 1.43
PTPN7-215ENST00000492451 TOP2BQ02880 1626 aa23.96■■□□□ 1.43
PTPN7-215ENST00000492451 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
PTPN7-215ENST00000492451 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 FBLN2P98095 1184 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 SNAPC4Q5SXM2 1469 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
PTPN7-215ENST00000492451 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
PTPN7-215ENST00000492451 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
PTPN7-215ENST00000492451 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
PTPN7-215ENST00000492451 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
PTPN7-215ENST00000492451 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
PTPN7-215ENST00000492451 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
PTPN7-215ENST00000492451 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
PTPN7-215ENST00000492451 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
PTPN7-215ENST00000492451 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
PTPN7-215ENST00000492451 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
PTPN7-215ENST00000492451 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
PTPN7-215ENST00000492451 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
PTPN7-215ENST00000492451 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
PTPN7-215ENST00000492451 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
PTPN7-215ENST00000492451 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
PTPN7-215ENST00000492451 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
PTPN7-215ENST00000492451 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
PTPN7-215ENST00000492451 NUP160Q12769 1436 aa23.5■■□□□ 1.35
PTPN7-215ENST00000492451 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
PTPN7-215ENST00000492451 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
PTPN7-215ENST00000492451 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PTPN7-215ENST00000492451 CUL7Q14999 1698 aa23.38■■□□□ 1.33
PTPN7-215ENST00000492451 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
PTPN7-215ENST00000492451 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
PTPN7-215ENST00000492451 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms