RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
CDC42BPB-207ENST00000560492 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
CDC42BPB-207ENST00000560492 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
CDC42BPB-207ENST00000560492 ABCC9O60706 1549 aa24.1■■□□□ 1.45
CDC42BPB-207ENST00000560492 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
CDC42BPB-207ENST00000560492 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
CDC42BPB-207ENST00000560492 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
CDC42BPB-207ENST00000560492 NACADO15069 1562 aa22.57■■□□□ 1.2
CDC42BPB-207ENST00000560492 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
CDC42BPB-207ENST00000560492 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
CDC42BPB-207ENST00000560492 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
CDC42BPB-207ENST00000560492 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
CDC42BPB-207ENST00000560492 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
CDC42BPB-207ENST00000560492 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
CDC42BPB-207ENST00000560492 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-207ENST00000560492 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
CDC42BPB-207ENST00000560492 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
CDC42BPB-207ENST00000560492 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
CDC42BPB-207ENST00000560492 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
CDC42BPB-207ENST00000560492 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
CDC42BPB-207ENST00000560492 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
CDC42BPB-207ENST00000560492 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
CDC42BPB-207ENST00000560492 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
CDC42BPB-207ENST00000560492 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
CDC42BPB-207ENST00000560492 FOXD1Q16676 465 aa20.86■□□□□ 0.93
CDC42BPB-207ENST00000560492 CUX2O14529 1486 aa20.8■□□□□ 0.92
CDC42BPB-207ENST00000560492 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
CDC42BPB-207ENST00000560492 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
CDC42BPB-207ENST00000560492 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
CDC42BPB-207ENST00000560492 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
CDC42BPB-207ENST00000560492 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
CDC42BPB-207ENST00000560492 NESP48681 1621 aa20.61■□□□□ 0.89
CDC42BPB-207ENST00000560492 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-207ENST00000560492 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
CDC42BPB-207ENST00000560492 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
CDC42BPB-207ENST00000560492 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
CDC42BPB-207ENST00000560492 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
CDC42BPB-207ENST00000560492 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
CDC42BPB-207ENST00000560492 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
CDC42BPB-207ENST00000560492 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
CDC42BPB-207ENST00000560492 WIZO95785 1651 aa20.18■□□□□ 0.82
CDC42BPB-207ENST00000560492 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
CDC42BPB-207ENST00000560492 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
CDC42BPB-207ENST00000560492 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
CDC42BPB-207ENST00000560492 WDR62O43379 1518 aa20.08■□□□□ 0.81
CDC42BPB-207ENST00000560492 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
CDC42BPB-207ENST00000560492 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
CDC42BPB-207ENST00000560492 CFTRP13569 1480 aa19.87■□□□□ 0.77
CDC42BPB-207ENST00000560492 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-207ENST00000560492 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
CDC42BPB-207ENST00000560492 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
CDC42BPB-207ENST00000560492 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
CDC42BPB-207ENST00000560492 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
CDC42BPB-207ENST00000560492 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
CDC42BPB-207ENST00000560492 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
CDC42BPB-207ENST00000560492 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
CDC42BPB-207ENST00000560492 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
CDC42BPB-207ENST00000560492 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
CDC42BPB-207ENST00000560492 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
CDC42BPB-207ENST00000560492 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
CDC42BPB-207ENST00000560492 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
CDC42BPB-207ENST00000560492 TOPBP1Q92547 1522 aa19.58■□□□□ 0.73
CDC42BPB-207ENST00000560492 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
CDC42BPB-207ENST00000560492 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
CDC42BPB-207ENST00000560492 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
CDC42BPB-207ENST00000560492 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
CDC42BPB-207ENST00000560492 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
CDC42BPB-207ENST00000560492 CHD1O14646 1710 aa19.51■□□□□ 0.71
CDC42BPB-207ENST00000560492 MSH5O43196 834 aa19.5■□□□□ 0.71
CDC42BPB-207ENST00000560492 FBLN2P98095 1184 aa19.45■□□□□ 0.7
CDC42BPB-207ENST00000560492 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-207ENST00000560492 ADRA2BP18089 450 aa19.43■□□□□ 0.7
CDC42BPB-207ENST00000560492 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
CDC42BPB-207ENST00000560492 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDC42BPB-207ENST00000560492 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-207ENST00000560492 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
CDC42BPB-207ENST00000560492 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
CDC42BPB-207ENST00000560492 RAD54L2Q9Y4B4 1467 aa19.31■□□□□ 0.68
CDC42BPB-207ENST00000560492 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
CDC42BPB-207ENST00000560492 SOGA1O94964 1423 aa19.28■□□□□ 0.68
CDC42BPB-207ENST00000560492 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-207ENST00000560492 SNAPC4Q5SXM2 1469 aa19.25■□□□□ 0.67
CDC42BPB-207ENST00000560492 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
CDC42BPB-207ENST00000560492 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-207ENST00000560492 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
CDC42BPB-207ENST00000560492 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
CDC42BPB-207ENST00000560492 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPB-207ENST00000560492 CUX1P39880 1505 aa19.15■□□□□ 0.66
CDC42BPB-207ENST00000560492 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
CDC42BPB-207ENST00000560492 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
CDC42BPB-207ENST00000560492 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
CDC42BPB-207ENST00000560492 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
CDC42BPB-207ENST00000560492 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
CDC42BPB-207ENST00000560492 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
CDC42BPB-207ENST00000560492 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
CDC42BPB-207ENST00000560492 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
CDC42BPB-207ENST00000560492 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
CDC42BPB-207ENST00000560492 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
CDC42BPB-207ENST00000560492 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
CDC42BPB-207ENST00000560492 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
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