RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
ERBB3-215ENST00000550828 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
ERBB3-215ENST00000550828 ABCC9O60706 1549 aa27.74■■■□□ 2.03
ERBB3-215ENST00000550828 ZCCHC6Q5VYS8 1495 aaKnown RBP27.04■■□□□ 1.92
ERBB3-215ENST00000550828 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
ERBB3-215ENST00000550828 NACADO15069 1562 aa26.68■■□□□ 1.86
ERBB3-215ENST00000550828 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
ERBB3-215ENST00000550828 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
ERBB3-215ENST00000550828 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
ERBB3-215ENST00000550828 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
ERBB3-215ENST00000550828 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
ERBB3-215ENST00000550828 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
ERBB3-215ENST00000550828 BICRAQ9NZM4 1560 aa25.92■■□□□ 1.74
ERBB3-215ENST00000550828 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
ERBB3-215ENST00000550828 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
ERBB3-215ENST00000550828 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
ERBB3-215ENST00000550828 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
ERBB3-215ENST00000550828 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
ERBB3-215ENST00000550828 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
ERBB3-215ENST00000550828 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
ERBB3-215ENST00000550828 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
ERBB3-215ENST00000550828 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
ERBB3-215ENST00000550828 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
ERBB3-215ENST00000550828 WIZO95785 1651 aa24.75■■□□□ 1.55
ERBB3-215ENST00000550828 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
ERBB3-215ENST00000550828 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
ERBB3-215ENST00000550828 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
ERBB3-215ENST00000550828 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
ERBB3-215ENST00000550828 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
ERBB3-215ENST00000550828 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
ERBB3-215ENST00000550828 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
ERBB3-215ENST00000550828 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.49
ERBB3-215ENST00000550828 CUX2O14529 1486 aa24.22■■□□□ 1.47
ERBB3-215ENST00000550828 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
ERBB3-215ENST00000550828 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
ERBB3-215ENST00000550828 NESP48681 1621 aa23.97■■□□□ 1.43
ERBB3-215ENST00000550828 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
ERBB3-215ENST00000550828 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
ERBB3-215ENST00000550828 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
ERBB3-215ENST00000550828 CFTRP13569 1480 aa23.87■■□□□ 1.41
ERBB3-215ENST00000550828 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
ERBB3-215ENST00000550828 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
ERBB3-215ENST00000550828 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
ERBB3-215ENST00000550828 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
ERBB3-215ENST00000550828 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
ERBB3-215ENST00000550828 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
ERBB3-215ENST00000550828 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
ERBB3-215ENST00000550828 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
ERBB3-215ENST00000550828 WDR62O43379 1518 aa23.4■■□□□ 1.34
ERBB3-215ENST00000550828 CUX1P39880 1505 aa23.39■■□□□ 1.34
ERBB3-215ENST00000550828 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
ERBB3-215ENST00000550828 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
ERBB3-215ENST00000550828 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
ERBB3-215ENST00000550828 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
ERBB3-215ENST00000550828 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
ERBB3-215ENST00000550828 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
ERBB3-215ENST00000550828 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
ERBB3-215ENST00000550828 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
ERBB3-215ENST00000550828 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
ERBB3-215ENST00000550828 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
ERBB3-215ENST00000550828 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
ERBB3-215ENST00000550828 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
ERBB3-215ENST00000550828 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
ERBB3-215ENST00000550828 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
ERBB3-215ENST00000550828 SOGA1O94964 1423 aa23.02■■□□□ 1.28
ERBB3-215ENST00000550828 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
ERBB3-215ENST00000550828 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
ERBB3-215ENST00000550828 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
ERBB3-215ENST00000550828 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
ERBB3-215ENST00000550828 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
ERBB3-215ENST00000550828 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
ERBB3-215ENST00000550828 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
ERBB3-215ENST00000550828 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.252e-9■■■■■ 30.3
ERBB3-215ENST00000550828 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
ERBB3-215ENST00000550828 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
ERBB3-215ENST00000550828 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
ERBB3-215ENST00000550828 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
ERBB3-215ENST00000550828 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
ERBB3-215ENST00000550828 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
ERBB3-215ENST00000550828 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
ERBB3-215ENST00000550828 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
ERBB3-215ENST00000550828 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
ERBB3-215ENST00000550828 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
ERBB3-215ENST00000550828 IGF1RP08069 1367 aa22.63■■□□□ 1.21
ERBB3-215ENST00000550828 CHD1O14646 1710 aa22.62■■□□□ 1.21
ERBB3-215ENST00000550828 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
ERBB3-215ENST00000550828 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
ERBB3-215ENST00000550828 CUL7Q14999 1698 aa22.61■■□□□ 1.21
ERBB3-215ENST00000550828 EEA1Q15075 1411 aa22.58■■□□□ 1.21
ERBB3-215ENST00000550828 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
ERBB3-215ENST00000550828 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
ERBB3-215ENST00000550828 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
ERBB3-215ENST00000550828 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
ERBB3-215ENST00000550828 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
ERBB3-215ENST00000550828 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
ERBB3-215ENST00000550828 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
ERBB3-215ENST00000550828 KIF21BO75037 1637 aa22.45■■□□□ 1.18
ERBB3-215ENST00000550828 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
ERBB3-215ENST00000550828 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
ERBB3-215ENST00000550828 FBLN2P98095 1184 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms