RNA–Protein interactions for RNA: ENST00000640406.1

CSTB-204, Transcript of cystatin B, humanhuman

TSL 2 BASIC

Gene CSTB, Length 2,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTB-204ENST00000640406 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
CSTB-204ENST00000640406 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
CSTB-204ENST00000640406 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
CSTB-204ENST00000640406 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
CSTB-204ENST00000640406 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
CSTB-204ENST00000640406 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
CSTB-204ENST00000640406 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
CSTB-204ENST00000640406 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
CSTB-204ENST00000640406 MYO15BQ96JP2 1530 aa29.06■■■□□ 2.24
CSTB-204ENST00000640406 HRCP23327 699 aa28.61■■■□□ 2.17
CSTB-204ENST00000640406 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
CSTB-204ENST00000640406 ABCC9O60706 1549 aa28.35■■■□□ 2.13
CSTB-204ENST00000640406 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
CSTB-204ENST00000640406 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
CSTB-204ENST00000640406 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
CSTB-204ENST00000640406 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
CSTB-204ENST00000640406 TRIM26Q12899 539 aaPredicted RBP27.89■■■□□ 2.06
CSTB-204ENST00000640406 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
CSTB-204ENST00000640406 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
CSTB-204ENST00000640406 NACADO15069 1562 aa27.72■■■□□ 2.03
CSTB-204ENST00000640406 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
CSTB-204ENST00000640406 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
CSTB-204ENST00000640406 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
CSTB-204ENST00000640406 WIZO95785 1651 aa27.42■■□□□ 1.98
CSTB-204ENST00000640406 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
CSTB-204ENST00000640406 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
CSTB-204ENST00000640406 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
CSTB-204ENST00000640406 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
CSTB-204ENST00000640406 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
CSTB-204ENST00000640406 SMARCA4P51532 1647 aa26.95■■□□□ 1.9
CSTB-204ENST00000640406 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
CSTB-204ENST00000640406 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
CSTB-204ENST00000640406 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
CSTB-204ENST00000640406 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
CSTB-204ENST00000640406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.86
CSTB-204ENST00000640406 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
CSTB-204ENST00000640406 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
CSTB-204ENST00000640406 SOGA1O94964 1423 aa26.65■■□□□ 1.86
CSTB-204ENST00000640406 CEP162Q5TB80 1403 aa26.64■■□□□ 1.86
CSTB-204ENST00000640406 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
CSTB-204ENST00000640406 EEA1Q15075 1411 aa26.6■■□□□ 1.85
CSTB-204ENST00000640406 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
CSTB-204ENST00000640406 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
CSTB-204ENST00000640406 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
CSTB-204ENST00000640406 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
CSTB-204ENST00000640406 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
CSTB-204ENST00000640406 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
CSTB-204ENST00000640406 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
CSTB-204ENST00000640406 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
CSTB-204ENST00000640406 GOLGA3Q08378 1498 aa26.41■■□□□ 1.82
CSTB-204ENST00000640406 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
CSTB-204ENST00000640406 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
CSTB-204ENST00000640406 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
CSTB-204ENST00000640406 KIF21BO75037 1637 aa26.22■■□□□ 1.79
CSTB-204ENST00000640406 PELP1Q8IZL8 1130 aaKnown RBP26.21■■□□□ 1.79
CSTB-204ENST00000640406 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
CSTB-204ENST00000640406 ACIN1Q9UKV3 1341 aaKnown RBP26.19■■□□□ 1.78
CSTB-204ENST00000640406 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
CSTB-204ENST00000640406 CLIP1P30622 1438 aa26.11■■□□□ 1.77
CSTB-204ENST00000640406 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
CSTB-204ENST00000640406 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
CSTB-204ENST00000640406 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
CSTB-204ENST00000640406 CENPBP07199 599 aaPredicted RBP26.03■■□□□ 1.76
CSTB-204ENST00000640406 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
CSTB-204ENST00000640406 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
CSTB-204ENST00000640406 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
CSTB-204ENST00000640406 APLP2Q06481 763 aa25.94■■□□□ 1.74
CSTB-204ENST00000640406 GTF3C3Q9Y5Q9 886 aa25.87■■□□□ 1.73
CSTB-204ENST00000640406 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
CSTB-204ENST00000640406 RANGAP1P46060 587 aaPredicted RBP25.84■■□□□ 1.73
CSTB-204ENST00000640406 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
CSTB-204ENST00000640406 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
CSTB-204ENST00000640406 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
CSTB-204ENST00000640406 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
CSTB-204ENST00000640406 MIER1Q8N108 512 aa25.66■■□□□ 1.7
CSTB-204ENST00000640406 NCAPD3P42695 1498 aa25.64■■□□□ 1.7
CSTB-204ENST00000640406 CUX1P39880 1505 aa25.62■■□□□ 1.69
CSTB-204ENST00000640406 YTHDC1Q96MU7 727 aaKnown RBP25.62■■□□□ 1.69
CSTB-204ENST00000640406 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
CSTB-204ENST00000640406 CLSPNQ9HAW4 1339 aa25.57■■□□□ 1.68
CSTB-204ENST00000640406 KANK4Q5T7N3 995 aaPredicted RBP25.55■■□□□ 1.68
CSTB-204ENST00000640406 DHX57Q6P158 1386 aaKnown RBP25.53■■□□□ 1.68
CSTB-204ENST00000640406 CFTRP13569 1480 aa25.5■■□□□ 1.67
CSTB-204ENST00000640406 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
CSTB-204ENST00000640406 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
CSTB-204ENST00000640406 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
CSTB-204ENST00000640406 CUX2O14529 1486 aa25.34■■□□□ 1.65
CSTB-204ENST00000640406 CCNB3Q8WWL7 1395 aa25.34■■□□□ 1.65
CSTB-204ENST00000640406 IGF1RP08069 1367 aa25.27■■□□□ 1.64
CSTB-204ENST00000640406 ITGAEP38570 1179 aa25.2■■□□□ 1.63
CSTB-204ENST00000640406 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
CSTB-204ENST00000640406 MAP3K1Q13233 1512 aa25.19■■□□□ 1.62
CSTB-204ENST00000640406 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
CSTB-204ENST00000640406 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
CSTB-204ENST00000640406 FGD5Q6ZNL6 1462 aa25.14■■□□□ 1.61
CSTB-204ENST00000640406 RAB3GAP2Q9H2M9 1393 aa25.13■■□□□ 1.61
CSTB-204ENST00000640406 LRRC9Q6ZRR7 1453 aa25.09■■□□□ 1.61
CSTB-204ENST00000640406 MAPKBP1O60336 1514 aa25.06■■□□□ 1.6
CSTB-204ENST00000640406 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
CSTB-204ENST00000640406 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms