RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-215ENST00000498053 NISCHQ9Y2I1 1504 aa42.75■■■■■ 4.43
LRRFIP1-215ENST00000498053 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
LRRFIP1-215ENST00000498053 ABCC9O60706 1549 aa36.92■■■■□ 3.5
LRRFIP1-215ENST00000498053 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
LRRFIP1-215ENST00000498053 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
LRRFIP1-215ENST00000498053 RB1CC1Q8TDY2 1594 aa35.54■■■■□ 3.28
LRRFIP1-215ENST00000498053 NACADO15069 1562 aa35.53■■■■□ 3.28
LRRFIP1-215ENST00000498053 MYO15BQ96JP2 1530 aa35.33■■■■□ 3.25
LRRFIP1-215ENST00000498053 DCAF1Q9Y4B6 1507 aa35.31■■■■□ 3.24
LRRFIP1-215ENST00000498053 UNC13AQ9UPW8 1703 aa34.91■■■■□ 3.18
LRRFIP1-215ENST00000498053 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
LRRFIP1-215ENST00000498053 BICRAQ9NZM4 1560 aa34.54■■■■□ 3.12
LRRFIP1-215ENST00000498053 PABPN1Q86U42 306 aaKnown RBP eCLIP34.51■■■■□ 3.12
LRRFIP1-215ENST00000498053 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
LRRFIP1-215ENST00000498053 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
LRRFIP1-215ENST00000498053 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
LRRFIP1-215ENST00000498053 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
LRRFIP1-215ENST00000498053 CECR2Q9BXF3 1484 aa33.34■■■□□ 2.93
LRRFIP1-215ENST00000498053 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
LRRFIP1-215ENST00000498053 BAZ1AQ9NRL2 1556 aaPredicted RBP33.1■■■□□ 2.89
LRRFIP1-215ENST00000498053 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
LRRFIP1-215ENST00000498053 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
LRRFIP1-215ENST00000498053 SMARCA2P51531 1590 aa32.82■■■□□ 2.84
LRRFIP1-215ENST00000498053 PEG3Q9GZU2 1588 aa32.78■■■□□ 2.84
LRRFIP1-215ENST00000498053 NCAPD3P42695 1498 aa32.76■■■□□ 2.84
LRRFIP1-215ENST00000498053 WIZO95785 1651 aa32.71■■■□□ 2.83
LRRFIP1-215ENST00000498053 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
LRRFIP1-215ENST00000498053 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
LRRFIP1-215ENST00000498053 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
LRRFIP1-215ENST00000498053 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
LRRFIP1-215ENST00000498053 NESP48681 1621 aa32.05■■■□□ 2.72
LRRFIP1-215ENST00000498053 SUPT5HO00267 1087 aaKnown RBP32.03■■■□□ 2.72
LRRFIP1-215ENST00000498053 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
LRRFIP1-215ENST00000498053 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
LRRFIP1-215ENST00000498053 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.69
LRRFIP1-215ENST00000498053 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
LRRFIP1-215ENST00000498053 CFTRP13569 1480 aa31.72■■■□□ 2.67
LRRFIP1-215ENST00000498053 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
LRRFIP1-215ENST00000498053 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
LRRFIP1-215ENST00000498053 PRDM2Q13029 1718 aa31.61■■■□□ 2.65
LRRFIP1-215ENST00000498053 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
LRRFIP1-215ENST00000498053 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
LRRFIP1-215ENST00000498053 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
LRRFIP1-215ENST00000498053 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
LRRFIP1-215ENST00000498053 CUX2O14529 1486 aa31.27■■■□□ 2.6
LRRFIP1-215ENST00000498053 WDR62O43379 1518 aa31.27■■■□□ 2.6
LRRFIP1-215ENST00000498053 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
LRRFIP1-215ENST00000498053 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
LRRFIP1-215ENST00000498053 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
LRRFIP1-215ENST00000498053 CUX1P39880 1505 aa30.95■■■□□ 2.55
LRRFIP1-215ENST00000498053 ABCC8Q09428 1581 aa30.94■■■□□ 2.54
LRRFIP1-215ENST00000498053 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.52
LRRFIP1-215ENST00000498053 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
LRRFIP1-215ENST00000498053 FGD5Q6ZNL6 1462 aa30.79■■■□□ 2.52
LRRFIP1-215ENST00000498053 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.52
LRRFIP1-215ENST00000498053 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
LRRFIP1-215ENST00000498053 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
LRRFIP1-215ENST00000498053 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
LRRFIP1-215ENST00000498053 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
LRRFIP1-215ENST00000498053 RAD54L2Q9Y4B4 1467 aa30.71■■■□□ 2.51
LRRFIP1-215ENST00000498053 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
LRRFIP1-215ENST00000498053 SOGA1O94964 1423 aa30.64■■■□□ 2.49
LRRFIP1-215ENST00000498053 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
LRRFIP1-215ENST00000498053 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
LRRFIP1-215ENST00000498053 AQRO60306 1485 aaKnown RBP eCLIP30.51■■■□□ 2.481e-7■■■■■ 27.6
LRRFIP1-215ENST00000498053 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
LRRFIP1-215ENST00000498053 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
LRRFIP1-215ENST00000498053 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
LRRFIP1-215ENST00000498053 PBRM1Q86U86 1689 aa30.35■■■□□ 2.45
LRRFIP1-215ENST00000498053 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
LRRFIP1-215ENST00000498053 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
LRRFIP1-215ENST00000498053 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
LRRFIP1-215ENST00000498053 CHD1O14646 1710 aa30.2■■■□□ 2.43
LRRFIP1-215ENST00000498053 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
LRRFIP1-215ENST00000498053 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
LRRFIP1-215ENST00000498053 ADAMTS12P58397 1594 aa30.09■■■□□ 2.41
LRRFIP1-215ENST00000498053 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
LRRFIP1-215ENST00000498053 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
LRRFIP1-215ENST00000498053 FBLN2P98095 1184 aa30.06■■■□□ 2.4
LRRFIP1-215ENST00000498053 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
LRRFIP1-215ENST00000498053 RUSC2Q8N2Y8 1516 aa30.01■■■□□ 2.4
LRRFIP1-215ENST00000498053 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
LRRFIP1-215ENST00000498053 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
LRRFIP1-215ENST00000498053 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
LRRFIP1-215ENST00000498053 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
LRRFIP1-215ENST00000498053 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
LRRFIP1-215ENST00000498053 IGF1RP08069 1367 aa29.93■■■□□ 2.38
LRRFIP1-215ENST00000498053 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
LRRFIP1-215ENST00000498053 CUL7Q14999 1698 aa29.9■■■□□ 2.38
LRRFIP1-215ENST00000498053 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
LRRFIP1-215ENST00000498053 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
LRRFIP1-215ENST00000498053 CARMIL1Q5VZK9 1371 aa29.76■■■□□ 2.35
LRRFIP1-215ENST00000498053 NUP160Q12769 1436 aa29.74■■■□□ 2.35
LRRFIP1-215ENST00000498053 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
LRRFIP1-215ENST00000498053 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
LRRFIP1-215ENST00000498053 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
LRRFIP1-215ENST00000498053 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
LRRFIP1-215ENST00000498053 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
LRRFIP1-215ENST00000498053 EEA1Q15075 1411 aa29.62■■■□□ 2.33
LRRFIP1-215ENST00000498053 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms