RNA–Protein interactions for RNA: ENST00000616136.1

EP400-209, Transcript of E1A binding protein p400, humanhuman

TSL 2

Gene EP400, Length 3,134 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-209ENST00000616136 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
EP400-209ENST00000616136 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
EP400-209ENST00000616136 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
EP400-209ENST00000616136 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
EP400-209ENST00000616136 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.1
EP400-209ENST00000616136 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
EP400-209ENST00000616136 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
EP400-209ENST00000616136 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
EP400-209ENST00000616136 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
EP400-209ENST00000616136 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
EP400-209ENST00000616136 HRCP23327 699 aa20.99■□□□□ 0.95
EP400-209ENST00000616136 PPARGC1BQ86YN6 1023 aaKnown RBP20.94■□□□□ 0.94
EP400-209ENST00000616136 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
EP400-209ENST00000616136 ABCC9O60706 1549 aa20.87■□□□□ 0.93
EP400-209ENST00000616136 LOC105371045A0A1W2PR82 267 aa20.79■□□□□ 0.92
EP400-209ENST00000616136 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
EP400-209ENST00000616136 NACADO15069 1562 aa20.55■□□□□ 0.88
EP400-209ENST00000616136 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
EP400-209ENST00000616136 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
EP400-209ENST00000616136 CECR2Q9BXF3 1484 aa20.46■□□□□ 0.87
EP400-209ENST00000616136 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
EP400-209ENST00000616136 FAM9AQ8IZU1 332 aaPredicted RBP20.36■□□□□ 0.85
EP400-209ENST00000616136 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
EP400-209ENST00000616136 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
EP400-209ENST00000616136 WIZO95785 1651 aa20.25■□□□□ 0.83
EP400-209ENST00000616136 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
EP400-209ENST00000616136 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
EP400-209ENST00000616136 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
EP400-209ENST00000616136 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
EP400-209ENST00000616136 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
EP400-209ENST00000616136 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
EP400-209ENST00000616136 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
EP400-209ENST00000616136 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.77
EP400-209ENST00000616136 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
EP400-209ENST00000616136 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
EP400-209ENST00000616136 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
EP400-209ENST00000616136 ZEB1P37275 1124 aaPredicted RBP19.79■□□□□ 0.76
EP400-209ENST00000616136 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
EP400-209ENST00000616136 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
EP400-209ENST00000616136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
EP400-209ENST00000616136 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
EP400-209ENST00000616136 SOGA1O94964 1423 aa19.59■□□□□ 0.73
EP400-209ENST00000616136 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
EP400-209ENST00000616136 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.71
EP400-209ENST00000616136 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
EP400-209ENST00000616136 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
EP400-209ENST00000616136 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
EP400-209ENST00000616136 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
EP400-209ENST00000616136 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
EP400-209ENST00000616136 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
EP400-209ENST00000616136 EEA1Q15075 1411 aa19.38■□□□□ 0.69
EP400-209ENST00000616136 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
EP400-209ENST00000616136 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
EP400-209ENST00000616136 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
EP400-209ENST00000616136 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.69
EP400-209ENST00000616136 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
EP400-209ENST00000616136 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
EP400-209ENST00000616136 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
EP400-209ENST00000616136 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
EP400-209ENST00000616136 MYT1Q01538 1121 aa19.2■□□□□ 0.66
EP400-209ENST00000616136 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
EP400-209ENST00000616136 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
EP400-209ENST00000616136 KIF21BO75037 1637 aa19.17■□□□□ 0.66
EP400-209ENST00000616136 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
EP400-209ENST00000616136 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
EP400-209ENST00000616136 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
EP400-209ENST00000616136 CLIP1P30622 1438 aa19.09■□□□□ 0.65
EP400-209ENST00000616136 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
EP400-209ENST00000616136 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
EP400-209ENST00000616136 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
EP400-209ENST00000616136 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.64
EP400-209ENST00000616136 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
EP400-209ENST00000616136 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
EP400-209ENST00000616136 CUX1P39880 1505 aa18.96■□□□□ 0.63
EP400-209ENST00000616136 MIER1Q8N108 512 aa18.92■□□□□ 0.62
EP400-209ENST00000616136 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
EP400-209ENST00000616136 CFTRP13569 1480 aa18.89■□□□□ 0.61
EP400-209ENST00000616136 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
EP400-209ENST00000616136 APLP2Q06481 763 aa18.84■□□□□ 0.61
EP400-209ENST00000616136 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
EP400-209ENST00000616136 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
EP400-209ENST00000616136 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
EP400-209ENST00000616136 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
EP400-209ENST00000616136 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
EP400-209ENST00000616136 CUX2O14529 1486 aa18.67■□□□□ 0.58
EP400-209ENST00000616136 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
EP400-209ENST00000616136 ITGAEP38570 1179 aa18.63■□□□□ 0.57
EP400-209ENST00000616136 IGF1RP08069 1367 aa18.63■□□□□ 0.57
EP400-209ENST00000616136 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
EP400-209ENST00000616136 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
EP400-209ENST00000616136 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
EP400-209ENST00000616136 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
EP400-209ENST00000616136 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
EP400-209ENST00000616136 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
EP400-209ENST00000616136 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
EP400-209ENST00000616136 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
EP400-209ENST00000616136 NESP48681 1621 aa18.46■□□□□ 0.55
EP400-209ENST00000616136 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
EP400-209ENST00000616136 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
EP400-209ENST00000616136 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms