RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, human

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-221	ENST00000618621	DCAF8L2	P0C7V8	631 aa		5.28	□□□□□ -1.56
LPP-221	ENST00000618621	SLC24A1	O60721	1099 aa		5.2	□□□□□ -1.58
LPP-221	ENST00000618621	MYT1	Q01538	1121 aa		5.04	□□□□□ -1.6
LPP-221	ENST00000618621	PELP1	Q8IZL8	1130 aa	Known RBP	5.02	□□□□□ -1.61
LPP-221	ENST00000618621	NISCH	Q9Y2I1	1504 aa		4.98	□□□□□ -1.61
LPP-221	ENST00000618621	SUPT5H	O00267	1087 aa	Known RBP	4.92	□□□□□ -1.62
LPP-221	ENST00000618621	SHROOM4	Q9ULL8	1493 aa		4.87	□□□□□ -1.63
LPP-221	ENST00000618621	PCGF6	Q9BYE7	350 aa		4.83	□□□□□ -1.64
LPP-221	ENST00000618621	EHMT2	Q96KQ7	1210 aa		4.83	□□□□□ -1.64
LPP-221	ENST00000618621	HRC	P23327	699 aa		4.78	□□□□□ -1.64
LPP-221	ENST00000618621	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.77	□□□□□ -1.65
LPP-221	ENST00000618621	ZEB1	P37275	1124 aa	Predicted RBP	4.77	□□□□□ -1.65
LPP-221	ENST00000618621	DAXX	Q9UER7	740 aa	Predicted RBP	4.69	□□□□□ -1.66
LPP-221	ENST00000618621	APLP2	Q06481	763 aa		4.69	□□□□□ -1.66
LPP-221	ENST00000618621	CENPB	P07199	599 aa	Predicted RBP	4.67	□□□□□ -1.66
LPP-221	ENST00000618621	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.66	□□□□□ -1.66
LPP-221	ENST00000618621	PLPPR3	Q6T4P5	718 aa		4.65	□□□□□ -1.66
LPP-221	ENST00000618621	CHIC1	Q5VXU3	224 aa		4.64	□□□□□ -1.67
LPP-221	ENST00000618621	RTN4	Q9NQC3	1192 aa	Known RBP	4.64	□□□□□ -1.67
LPP-221	ENST00000618621	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.63	□□□□□ -1.67
LPP-221	ENST00000618621	TRIM26	Q12899	539 aa	Predicted RBP	4.63	□□□□□ -1.67
LPP-221	ENST00000618621	LOC105371045	A0A1W2PR82	267 aa		4.62	□□□□□ -1.67
LPP-221	ENST00000618621	CCER1	Q8TC90	406 aa	Predicted RBP	4.62	□□□□□ -1.67
LPP-221	ENST00000618621	ERICH6	Q7L0X2	663 aa		4.59	□□□□□ -1.67
LPP-221	ENST00000618621	RANGAP1	P46060	587 aa	Predicted RBP	4.59	□□□□□ -1.67
LPP-221	ENST00000618621	TRIM41	Q8WV44	630 aa		4.58	□□□□□ -1.68
LPP-221	ENST00000618621	PRKCSH	P14314	528 aa	Predicted RBP	4.56	□□□□□ -1.68
LPP-221	ENST00000618621	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
LPP-221	ENST00000618621	MYT1L	Q9UL68	1186 aa		4.54	□□□□□ -1.68
LPP-221	ENST00000618621	UBTF	P17480	764 aa	Known RBP	4.52	□□□□□ -1.69
LPP-221	ENST00000618621	NEFL	P07196	543 aa		4.5	□□□□□ -1.69
LPP-221	ENST00000618621	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.49	□□□□□ -1.69
LPP-221	ENST00000618621	NCBP3	Q53F19	620 aa	Known RBP	4.48	□□□□□ -1.69
LPP-221	ENST00000618621	YTHDC1	Q96MU7	727 aa	Known RBP	4.47	□□□□□ -1.69
LPP-221	ENST00000618621	ABCC9	O60706	1549 aa		4.46	□□□□□ -1.7
LPP-221	ENST00000618621	DIEXF	Q68CQ4	756 aa	Known RBP	4.45	□□□□□ -1.7
LPP-221	ENST00000618621	ACIN1	Q9UKV3	1341 aa	Known RBP	4.44	□□□□□ -1.7
LPP-221	ENST00000618621	TIMELESS	Q9UNS1	1208 aa		4.44	□□□□□ -1.7
LPP-221	ENST00000618621	EIF5B	O60841	1220 aa	Known RBP	4.43	□□□□□ -1.7
LPP-221	ENST00000618621	GTF3C3	Q9Y5Q9	886 aa		4.42	□□□□□ -1.7
LPP-221	ENST00000618621	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.42	□□□□□ -1.7
LPP-221	ENST00000618621	SCAF1	Q9H7N4	1312 aa	Known RBP	4.4	□□□□□ -1.7
LPP-221	ENST00000618621	AMER1	Q5JTC6	1135 aa	Predicted RBP	4.4	□□□□□ -1.7
LPP-221	ENST00000618621	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.37	□□□□□ -1.71
LPP-221	ENST00000618621	TULP1	O00294	542 aa	Predicted RBP	4.36	□□□□□ -1.71
LPP-221	ENST00000618621	NEUROD1	Q13562	356 aa		4.36	□□□□□ -1.71
LPP-221	ENST00000618621	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.36	□□□□□ -1.71
LPP-221	ENST00000618621	PLEKHG5	O94827	1062 aa		4.35	□□□□□ -1.71
LPP-221	ENST00000618621	KCNA4	P22459	653 aa		4.34	□□□□□ -1.71
LPP-221	ENST00000618621	ARX	Q96QS3	562 aa		4.33	□□□□□ -1.72
LPP-221	ENST00000618621	ITGAE	P38570	1179 aa		4.32	□□□□□ -1.72
LPP-221	ENST00000618621	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.31	□□□□□ -1.72
LPP-221	ENST00000618621	DCAF1	Q9Y4B6	1507 aa		4.31	□□□□□ -1.72
LPP-221	ENST00000618621	MIER1	Q8N108	512 aa		4.3	□□□□□ -1.72
LPP-221	ENST00000618621	ANP32C	O43423	234 aa		4.29	□□□□□ -1.72
LPP-221	ENST00000618621	PODXL2	Q9NZ53	605 aa		4.28	□□□□□ -1.72
LPP-221	ENST00000618621	RTL5	Q5HYW3	569 aa	Predicted RBP	4.28	□□□□□ -1.72
LPP-221	ENST00000618621	FBLN2	P98095	1184 aa		4.28	□□□□□ -1.72
LPP-221	ENST00000618621	KLHL34	Q8N239	644 aa		4.27	□□□□□ -1.73
LPP-221	ENST00000618621	TAOK2	Q9UL54	1235 aa		4.27	□□□□□ -1.73
LPP-221	ENST00000618621	BCAN	Q96GW7	911 aa		4.26	□□□□□ -1.73
LPP-221	ENST00000618621	HOMEZ	Q8IX15	550 aa		4.26	□□□□□ -1.73
LPP-221	ENST00000618621	P3H3	Q8IVL6	736 aa		4.26	□□□□□ -1.73
LPP-221	ENST00000618621	CLSPN	Q9HAW4	1339 aa		4.25	□□□□□ -1.73
LPP-221	ENST00000618621	POLR3GL	Q9BT43	218 aa		4.25	□□□□□ -1.73
LPP-221	ENST00000618621	CSRNP3	Q8WYN3	585 aa		4.25	□□□□□ -1.73
LPP-221	ENST00000618621	TPRN	Q4KMQ1	711 aa		4.25	□□□□□ -1.73
LPP-221	ENST00000618621	ARID3C	A6NKF2	412 aa		4.24	□□□□□ -1.73
LPP-221	ENST00000618621	FAM50A	Q14320	339 aa	Known RBP	4.23	□□□□□ -1.73
LPP-221	ENST00000618621	TRIM52	Q96A61	297 aa		4.23	□□□□□ -1.73
LPP-221	ENST00000618621	BCL11A	Q9H165	835 aa		4.23	□□□□□ -1.73
LPP-221	ENST00000618621	CNGB1	Q14028	1251 aa	Predicted RBP	4.22	□□□□□ -1.73
LPP-221	ENST00000618621	MYO15B	Q96JP2	1530 aa		4.21	□□□□□ -1.73
LPP-221	ENST00000618621	C14orf37	Q86TY3	774 aa		4.19	□□□□□ -1.74
LPP-221	ENST00000618621	DDX10	Q13206	875 aa	Known RBP	4.19	□□□□□ -1.74
LPP-221	ENST00000618621	FKBP8	Q14318	412 aa		4.19	□□□□□ -1.74
LPP-221	ENST00000618621	ANP32E	Q9BTT0	268 aa		4.17	□□□□□ -1.74
LPP-221	ENST00000618621	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.17	□□□□□ -1.74
LPP-221	ENST00000618621	ANP32A	P39687	249 aa	Known RBP	4.17	□□□□□ -1.74
LPP-221	ENST00000618621	NPM2	Q86SE8	214 aa	Known RBP	4.16	□□□□□ -1.74
LPP-221	ENST00000618621	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.16	□□□□□ -1.74
LPP-221	ENST00000618621	AEBP2	Q6ZN18	517 aa	Predicted RBP	4.14	□□□□□ -1.75
LPP-221	ENST00000618621	ANP32B	Q92688	251 aa	Known RBP	4.13	□□□□□ -1.75
LPP-221	ENST00000618621	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.13	□□□□□ -1.75
LPP-221	ENST00000618621	SCRIB	Q14160	1630 aa		4.13	□□□□□ -1.75
LPP-221	ENST00000618621	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.13	□□□□□ -1.75
LPP-221	ENST00000618621	HAP1	P54257	671 aa	Predicted RBP	4.12	□□□□□ -1.75
LPP-221	ENST00000618621	TSHZ2	Q9NRE2	1034 aa		4.11	□□□□□ -1.75
LPP-221	ENST00000618621	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
LPP-221	ENST00000618621	TMC1	Q8TDI8	760 aa		4.09	□□□□□ -1.75
LPP-221	ENST00000618621	PLCB2	Q00722	1185 aa		4.09	□□□□□ -1.75
LPP-221	ENST00000618621	NEFM	P07197	916 aa		4.09	□□□□□ -1.75
LPP-221	ENST00000618621	UPF2	Q9HAU5	1272 aa	Known RBP	4.09	□□□□□ -1.75
LPP-221	ENST00000618621	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.09	□□□□□ -1.76
LPP-221	ENST00000618621	ZNF326	Q5BKZ1	582 aa	Known RBP	4.09	□□□□□ -1.76
LPP-221	ENST00000618621	RBM19	Q9Y4C8	960 aa	Known RBP	4.09	□□□□□ -1.76
LPP-221	ENST00000618621	CANX	P27824	592 aa	Known RBP	4.08	□□□□□ -1.76
LPP-221	ENST00000618621	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.08	□□□□□ -1.76
LPP-221	ENST00000618621	CCDC136	Q96JN2	1154 aa		4.08	□□□□□ -1.76
LPP-221	ENST00000618621	RSF1	Q96T23	1441 aa	Predicted RBP	4.08	□□□□□ -1.76

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