RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
LRRFIP1-202ENST00000289175 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
LRRFIP1-202ENST00000289175 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
LRRFIP1-202ENST00000289175 ABCC9O60706 1549 aa26.17■■□□□ 1.78
LRRFIP1-202ENST00000289175 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
LRRFIP1-202ENST00000289175 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
LRRFIP1-202ENST00000289175 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
LRRFIP1-202ENST00000289175 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
LRRFIP1-202ENST00000289175 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
LRRFIP1-202ENST00000289175 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
LRRFIP1-202ENST00000289175 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
LRRFIP1-202ENST00000289175 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
LRRFIP1-202ENST00000289175 NACADO15069 1562 aa23.9■■□□□ 1.42
LRRFIP1-202ENST00000289175 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
LRRFIP1-202ENST00000289175 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
LRRFIP1-202ENST00000289175 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
LRRFIP1-202ENST00000289175 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
LRRFIP1-202ENST00000289175 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
LRRFIP1-202ENST00000289175 RSF1Q96T23 1441 aaPredicted RBP23.41■■□□□ 1.34
LRRFIP1-202ENST00000289175 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
LRRFIP1-202ENST00000289175 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
LRRFIP1-202ENST00000289175 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
LRRFIP1-202ENST00000289175 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
LRRFIP1-202ENST00000289175 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.29
LRRFIP1-202ENST00000289175 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
LRRFIP1-202ENST00000289175 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
LRRFIP1-202ENST00000289175 WIZO95785 1651 aa23.07■■□□□ 1.28
LRRFIP1-202ENST00000289175 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
LRRFIP1-202ENST00000289175 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
LRRFIP1-202ENST00000289175 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
LRRFIP1-202ENST00000289175 FBLN2P98095 1184 aa22.93■■□□□ 1.26
LRRFIP1-202ENST00000289175 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
LRRFIP1-202ENST00000289175 ATP1B4Q9UN42 357 aaPredicted RBP22.89■■□□□ 1.26
LRRFIP1-202ENST00000289175 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.24
LRRFIP1-202ENST00000289175 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
LRRFIP1-202ENST00000289175 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
LRRFIP1-202ENST00000289175 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
LRRFIP1-202ENST00000289175 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
LRRFIP1-202ENST00000289175 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
LRRFIP1-202ENST00000289175 NESP48681 1621 aa22.63■■□□□ 1.21
LRRFIP1-202ENST00000289175 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
LRRFIP1-202ENST00000289175 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
LRRFIP1-202ENST00000289175 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
LRRFIP1-202ENST00000289175 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
LRRFIP1-202ENST00000289175 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
LRRFIP1-202ENST00000289175 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
LRRFIP1-202ENST00000289175 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
LRRFIP1-202ENST00000289175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.34■■□□□ 1.17
LRRFIP1-202ENST00000289175 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
LRRFIP1-202ENST00000289175 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
LRRFIP1-202ENST00000289175 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
LRRFIP1-202ENST00000289175 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
LRRFIP1-202ENST00000289175 SOGA1O94964 1423 aa22.28■■□□□ 1.16
LRRFIP1-202ENST00000289175 APLP2Q06481 763 aa22.23■■□□□ 1.15
LRRFIP1-202ENST00000289175 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
LRRFIP1-202ENST00000289175 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
LRRFIP1-202ENST00000289175 ITGAEP38570 1179 aa22.16■■□□□ 1.14
LRRFIP1-202ENST00000289175 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.14
LRRFIP1-202ENST00000289175 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
LRRFIP1-202ENST00000289175 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
LRRFIP1-202ENST00000289175 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
LRRFIP1-202ENST00000289175 CUX2O14529 1486 aa22.02■■□□□ 1.12
LRRFIP1-202ENST00000289175 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
LRRFIP1-202ENST00000289175 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.11e-7■■■■■ 27.6
LRRFIP1-202ENST00000289175 CFTRP13569 1480 aa21.89■■□□□ 1.1
LRRFIP1-202ENST00000289175 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
LRRFIP1-202ENST00000289175 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
LRRFIP1-202ENST00000289175 KIF27Q86VH2 1401 aa21.77■■□□□ 1.07
LRRFIP1-202ENST00000289175 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
LRRFIP1-202ENST00000289175 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
LRRFIP1-202ENST00000289175 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
LRRFIP1-202ENST00000289175 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.07
LRRFIP1-202ENST00000289175 CUX1P39880 1505 aa21.7■■□□□ 1.06
LRRFIP1-202ENST00000289175 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
LRRFIP1-202ENST00000289175 ZNF777Q9ULD5 760 aaPredicted RBP21.64■■□□□ 1.05
LRRFIP1-202ENST00000289175 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
LRRFIP1-202ENST00000289175 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
LRRFIP1-202ENST00000289175 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
LRRFIP1-202ENST00000289175 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
LRRFIP1-202ENST00000289175 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
LRRFIP1-202ENST00000289175 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
LRRFIP1-202ENST00000289175 IGF1RP08069 1367 aa21.57■■□□□ 1.04
LRRFIP1-202ENST00000289175 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
LRRFIP1-202ENST00000289175 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
LRRFIP1-202ENST00000289175 CLIP1P30622 1438 aa21.51■■□□□ 1.03
LRRFIP1-202ENST00000289175 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
LRRFIP1-202ENST00000289175 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
LRRFIP1-202ENST00000289175 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
LRRFIP1-202ENST00000289175 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
LRRFIP1-202ENST00000289175 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
LRRFIP1-202ENST00000289175 KIF21AQ7Z4S6 1674 aa21.42■■□□□ 1.02
LRRFIP1-202ENST00000289175 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
LRRFIP1-202ENST00000289175 GOLGA3Q08378 1498 aa21.41■■□□□ 1.02
LRRFIP1-202ENST00000289175 KANK4Q5T7N3 995 aaPredicted RBP21.38■■□□□ 1.01
LRRFIP1-202ENST00000289175 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
LRRFIP1-202ENST00000289175 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
LRRFIP1-202ENST00000289175 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
LRRFIP1-202ENST00000289175 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
LRRFIP1-202ENST00000289175 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
LRRFIP1-202ENST00000289175 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms