Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 KIF22-210ENST00000570173 562 ntTSL 513.35□□□□□ -0.274e-7■□□□□ 8.4
XRCC6P12956 NSD2-220ENST00000509115 1212 ntTSL 213.29□□□□□ -0.284e-7■□□□□ 8.4
XRCC6P12956 NSD2-222ENST00000512700 1095 ntTSL 513.29□□□□□ -0.284e-7■□□□□ 8.4
XRCC6P12956 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.324e-7■□□□□ 8.4
XRCC6P12956 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.374e-7■□□□□ 8.4
XRCC6P12956 NSD2-202ENST00000353275 7980 ntTSL 1 (best)12.44□□□□□ -0.424e-7■□□□□ 8.4
XRCC6P12956 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.494e-7■□□□□ 8.4
XRCC6P12956 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.54e-7■□□□□ 8.4
XRCC6P12956 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC11.35□□□□□ -0.594e-7■□□□□ 8.4
XRCC6P12956 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC11.31□□□□□ -0.64e-7■□□□□ 8.4
XRCC6P12956 NSD2-201ENST00000312087 8050 ntTSL 1 (best)11.25□□□□□ -0.614e-7■□□□□ 8.4
XRCC6P12956 DDB1-203ENST00000451943 1224 ntTSL 210.16□□□□□ -0.784e-7■□□□□ 8.4
XRCC6P12956 RBBP6-207ENST00000564314 3361 ntTSL 29.94□□□□□ -0.824e-7■□□□□ 8.4
XRCC6P12956 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC9.2□□□□□ -0.944e-7■□□□□ 8.4
XRCC6P12956 NRDC-203ENST00000440943 1660 ntTSL 58.81□□□□□ -14e-7■□□□□ 8.4
XRCC6P12956 NRDC-210ENST00000485608 3149 ntTSL 28.43□□□□□ -1.064e-7■□□□□ 8.4
XRCC6P12956 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.184e-7■□□□□ 8.4
XRCC6P12956 RANBP1-212ENST00000467920 529 ntTSL 26.29□□□□□ -1.43e-10■□□□□ 8.4
XRCC6P12956 RBBP6-209ENST00000567686 1138 ntTSL 55.88□□□□□ -1.474e-7■□□□□ 8.4
XRCC6P12956 NASP-210ENST00000481782 3659 ntTSL 29.59□□□□□ -0.875e-14■□□□□ 8.4
XRCC6P12956 NASP-218ENST00000530073 2740 ntTSL 29.26□□□□□ -0.935e-14■□□□□ 8.4
XRCC6P12956 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 59.22□□□□□ -0.935e-14■□□□□ 8.4
XRCC6P12956 NASP-223ENST00000534450 632 ntTSL 28.49□□□□□ -1.055e-14■□□□□ 8.4
XRCC6P12956 CALCOCO1-203ENST00000546443 1523 ntTSL 1 (best)17.88■□□□□ 0.457e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC14.35□□□□□ -0.117e-6■□□□□ 8.4
XRCC6P12956 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.277e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.377e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC11.73□□□□□ -0.537e-6■□□□□ 8.4
XRCC6P12956 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.587e-6■□□□□ 8.4
XRCC6P12956 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.85■□□□□ 0.778e-12■□□□□ 8.4
XRCC6P12956 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.94□□□□□ -0.826e-10■□□□□ 8.3
XRCC6P12956 PPP2R5C-215ENST00000556068 3363 ntTSL 28.46□□□□□ -1.066e-10■□□□□ 8.3
XRCC6P12956 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.952e-10■□□□□ 8.3
XRCC6P12956 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.06■■□□□ 1.67e-11■□□□□ 8.3
XRCC6P12956 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.07■■□□□ 1.127e-11■□□□□ 8.3
XRCC6P12956 EGFL7-206ENST00000492002 654 ntTSL 525.67■■□□□ 1.72e-15■□□□□ 8.3
XRCC6P12956 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.422e-15■□□□□ 8.3
XRCC6P12956 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.372e-15■□□□□ 8.3
XRCC6P12956 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.182e-15■□□□□ 8.3
XRCC6P12956 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.92e-15■□□□□ 8.3
XRCC6P12956 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.352e-6■□□□□ 8.3
XRCC6P12956 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.272e-6■□□□□ 8.3
XRCC6P12956 E4F1-202ENST00000562589 817 ntTSL 528.05■■■□□ 2.082e-6■□□□□ 8.3
XRCC6P12956 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.042e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-219ENST00000584137 529 ntTSL 424.82■■□□□ 1.562e-6■□□□□ 8.3
XRCC6P12956 SYMPK-209ENST00000598155 1603 ntTSL 522.3■■□□□ 1.162e-6■□□□□ 8.3
XRCC6P12956 E4F1-207ENST00000565413 940 ntTSL 321.95■■□□□ 1.12e-6■□□□□ 8.3
XRCC6P12956 KIF2A-207ENST00000509663 759 ntTSL 321.8■■□□□ 1.082e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-216ENST00000583060 477 ntTSL 321.54■■□□□ 1.042e-6■□□□□ 8.3
XRCC6P12956 RNF44-207ENST00000513029 1647 ntTSL 220.14■□□□□ 0.812e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.672e-6■□□□□ 8.3
XRCC6P12956 RNF44-202ENST00000504160 887 ntTSL 319.07■□□□□ 0.642e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.95■□□□□ 0.622e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-223ENST00000585299 537 ntTSL 418.76■□□□□ 0.592e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-207ENST00000579481 564 ntTSL 218.14■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 MATR3-213ENST00000508689 561 ntTSL 418.12■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-215ENST00000582574 556 ntTSL 318.09■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-221ENST00000585062 556 ntTSL 417.81■□□□□ 0.442e-6■□□□□ 8.3
XRCC6P12956 SYMPK-202ENST00000593504 5107 ntTSL 217.65■□□□□ 0.422e-6■□□□□ 8.3
XRCC6P12956 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.42e-6■□□□□ 8.3
XRCC6P12956 SYMPK-215ENST00000600237 5164 ntTSL 516.71■□□□□ 0.272e-6■□□□□ 8.3
XRCC6P12956 SYMPK-211ENST00000598364 995 ntTSL 316.12■□□□□ 0.172e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-214ENST00000513250 567 ntTSL 315.9■□□□□ 0.142e-6■□□□□ 8.3
XRCC6P12956 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC15.09■□□□□ 0.012e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-203ENST00000503151 627 ntTSL 314.77□□□□□ -0.052e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-209ENST00000579889 568 ntTSL 314.45□□□□□ -0.12e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-213ENST00000581441 552 ntTSL 414.45□□□□□ -0.12e-6■□□□□ 8.3
XRCC6P12956 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.122e-6■□□□□ 8.3
XRCC6P12956 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.122e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-210ENST00000508765 631 ntTSL 314.2□□□□□ -0.142e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-6■□□□□ 8.3
XRCC6P12956 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC13.61□□□□□ -0.232e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-202ENST00000503042 3540 ntTSL 213.5□□□□□ -0.252e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC13.07□□□□□ -0.322e-6■□□□□ 8.3
XRCC6P12956 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC13.02□□□□□ -0.322e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC12.74□□□□□ -0.372e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-205ENST00000557589 2784 ntTSL 212.4□□□□□ -0.432e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.462e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.562e-6■□□□□ 8.3
XRCC6P12956 SLC4A2-208ENST00000469467 442 ntTSL 210.9□□□□□ -0.662e-6■□□□□ 8.3
XRCC6P12956 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC10.82□□□□□ -0.682e-6■□□□□ 8.3
XRCC6P12956 FBXL13-206ENST00000448002 2582 ntTSL 1 (best)10.62□□□□□ -0.712e-6■□□□□ 8.3
XRCC6P12956 KIF2A-204ENST00000504883 783 ntTSL 210.28□□□□□ -0.762e-6■□□□□ 8.3
XRCC6P12956 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.64□□□□□ -0.872e-6■□□□□ 8.3
XRCC6P12956 FBXL13-211ENST00000477915 743 ntTSL 58.03□□□□□ -1.122e-6■□□□□ 8.3
XRCC6P12956 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.152e-6■□□□□ 8.3
XRCC6P12956 KIF2A-210ENST00000514082 874 ntTSL 1 (best)7.07□□□□□ -1.282e-6■□□□□ 8.3
XRCC6P12956 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.57□□□□□ -1.362e-6■□□□□ 8.3
XRCC6P12956 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.85□□□□□ -1.472e-6■□□□□ 8.3
XRCC6P12956 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.84□□□□□ -1.82e-6■□□□□ 8.3
XRCC6P12956 DUS1L-214ENST00000582407 714 ntTSL 519.06■□□□□ 0.645e-9■□□□□ 8.2
XRCC6P12956 DUS1L-208ENST00000578264 1071 ntTSL 518.9■□□□□ 0.625e-9■□□□□ 8.2
XRCC6P12956 FASN-203ENST00000579410 424 ntTSL 211.24□□□□□ -0.615e-9■□□□□ 8.2
XRCC6P12956 CHD2-226ENST00000636881 3545 ntTSL 510.89□□□□□ -0.675e-9■□□□□ 8.2
XRCC6P12956 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.695e-9■□□□□ 8.2
XRCC6P12956 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC10.53□□□□□ -0.725e-9■□□□□ 8.2
XRCC6P12956 SCAF11-211ENST00000547950 697 ntTSL 27.45□□□□□ -1.225e-9■□□□□ 8.2
XRCC6P12956 CHD2-227ENST00000637572 4452 ntTSL 56.09□□□□□ -1.445e-9■□□□□ 8.2
XRCC6P12956 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.74□□□□□ -1.495e-9■□□□□ 8.2
Retrieved 100 of 6,788 protein–RNA pairs in 31.8 ms