RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
SEC16A-206ENST00000431893 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
SEC16A-206ENST00000431893 SUPT5HO00267 1087 aaKnown RBP18.67■□□□□ 0.58
SEC16A-206ENST00000431893 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
SEC16A-206ENST00000431893 SHROOM4Q9ULL8 1493 aa18.24■□□□□ 0.51
SEC16A-206ENST00000431893 TTBK1Q5TCY1 1321 aaPredicted RBP18.11■□□□□ 0.49
SEC16A-206ENST00000431893 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
SEC16A-206ENST00000431893 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
SEC16A-206ENST00000431893 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
SEC16A-206ENST00000431893 APLP2Q06481 763 aa17.8■□□□□ 0.44
SEC16A-206ENST00000431893 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
SEC16A-206ENST00000431893 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
SEC16A-206ENST00000431893 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
SEC16A-206ENST00000431893 MYT1Q01538 1121 aa17.57■□□□□ 0.4
SEC16A-206ENST00000431893 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
SEC16A-206ENST00000431893 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-206ENST00000431893 NEFLP07196 543 aa17.3■□□□□ 0.36
SEC16A-206ENST00000431893 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
SEC16A-206ENST00000431893 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
SEC16A-206ENST00000431893 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
SEC16A-206ENST00000431893 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
SEC16A-206ENST00000431893 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.31
SEC16A-206ENST00000431893 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
SEC16A-206ENST00000431893 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
SEC16A-206ENST00000431893 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
SEC16A-206ENST00000431893 ITGAEP38570 1179 aa16.84■□□□□ 0.29
SEC16A-206ENST00000431893 HRCP23327 699 aa16.73■□□□□ 0.27
SEC16A-206ENST00000431893 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
SEC16A-206ENST00000431893 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
SEC16A-206ENST00000431893 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
SEC16A-206ENST00000431893 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
SEC16A-206ENST00000431893 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
SEC16A-206ENST00000431893 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
SEC16A-206ENST00000431893 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
SEC16A-206ENST00000431893 BCANQ96GW7 911 aa16.57■□□□□ 0.24
SEC16A-206ENST00000431893 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
SEC16A-206ENST00000431893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
SEC16A-206ENST00000431893 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
SEC16A-206ENST00000431893 DIEXFQ68CQ4 756 aaKnown RBP16.39■□□□□ 0.22
SEC16A-206ENST00000431893 BCL11AQ9H165 835 aa16.39■□□□□ 0.22
SEC16A-206ENST00000431893 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
SEC16A-206ENST00000431893 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
SEC16A-206ENST00000431893 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
SEC16A-206ENST00000431893 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
SEC16A-206ENST00000431893 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
SEC16A-206ENST00000431893 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
SEC16A-206ENST00000431893 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
SEC16A-206ENST00000431893 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
SEC16A-206ENST00000431893 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
SEC16A-206ENST00000431893 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
SEC16A-206ENST00000431893 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
SEC16A-206ENST00000431893 ANP32CO43423 234 aa16■□□□□ 0.15
SEC16A-206ENST00000431893 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
SEC16A-206ENST00000431893 ARXQ96QS3 562 aa15.89■□□□□ 0.13
SEC16A-206ENST00000431893 NBR1Q14596 966 aa15.84■□□□□ 0.13
SEC16A-206ENST00000431893 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.13
SEC16A-206ENST00000431893 FKBP8Q14318 412 aa15.8■□□□□ 0.12
SEC16A-206ENST00000431893 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
SEC16A-206ENST00000431893 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
SEC16A-206ENST00000431893 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
SEC16A-206ENST00000431893 ANP32BQ92688 251 aaKnown RBP15.71■□□□□ 0.11
SEC16A-206ENST00000431893 NEFMP07197 916 aa15.66■□□□□ 0.1
SEC16A-206ENST00000431893 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
SEC16A-206ENST00000431893 FBLN2P98095 1184 aa15.63■□□□□ 0.09
SEC16A-206ENST00000431893 FAM9BQ8IZU0 186 aa15.62■□□□□ 0.09
SEC16A-206ENST00000431893 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
SEC16A-206ENST00000431893 GLIPR1L2Q4G1C9 344 aa15.59■□□□□ 0.09
SEC16A-206ENST00000431893 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
SEC16A-206ENST00000431893 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
SEC16A-206ENST00000431893 ZNF777Q9ULD5 760 aaPredicted RBP15.56■□□□□ 0.08
SEC16A-206ENST00000431893 UPF2Q9HAU5 1272 aaKnown RBP15.52■□□□□ 0.07
SEC16A-206ENST00000431893 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
SEC16A-206ENST00000431893 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
SEC16A-206ENST00000431893 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
SEC16A-206ENST00000431893 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.07
SEC16A-206ENST00000431893 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
SEC16A-206ENST00000431893 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
SEC16A-206ENST00000431893 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
SEC16A-206ENST00000431893 SENP3Q9H4L4 574 aaPredicted RBP15.42■□□□□ 0.06
SEC16A-206ENST00000431893 HIRIP3Q9BW71 556 aaPredicted RBP15.39■□□□□ 0.05
SEC16A-206ENST00000431893 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
SEC16A-206ENST00000431893 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
SEC16A-206ENST00000431893 TONSLQ96HA7 1378 aa15.34■□□□□ 0.05
SEC16A-206ENST00000431893 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
SEC16A-206ENST00000431893 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
SEC16A-206ENST00000431893 A0A0G2JS52 829 aa15.3■□□□□ 0.04
SEC16A-206ENST00000431893 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.29■□□□□ 0.04
SEC16A-206ENST00000431893 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
SEC16A-206ENST00000431893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■□□□ 11.6
SEC16A-206ENST00000431893 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
SEC16A-206ENST00000431893 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
SEC16A-206ENST00000431893 MIER1Q8N108 512 aa15.27■□□□□ 0.04
SEC16A-206ENST00000431893 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
SEC16A-206ENST00000431893 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEC16A-206ENST00000431893 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.04
SEC16A-206ENST00000431893 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
SEC16A-206ENST00000431893 TRIM44Q96DX7 344 aaPredicted RBP15.26■□□□□ 0.03
SEC16A-206ENST00000431893 CDK11BP21127 795 aaKnown RBP15.25■□□□□ 0.03
SEC16A-206ENST00000431893 AMER1Q5JTC6 1135 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-206ENST00000431893 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms