RNA–Protein interactions for RNA: ENST00000274811.8

RNF44-201, Transcript of ring finger protein 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF44, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-201ENST00000274811 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
RNF44-201ENST00000274811 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
RNF44-201ENST00000274811 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
RNF44-201ENST00000274811 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
RNF44-201ENST00000274811 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
RNF44-201ENST00000274811 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
RNF44-201ENST00000274811 HRCP23327 699 aa23.01■■□□□ 1.27
RNF44-201ENST00000274811 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
RNF44-201ENST00000274811 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
RNF44-201ENST00000274811 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
RNF44-201ENST00000274811 LOC105371045A0A1W2PR82 267 aa22.47■■□□□ 1.19
RNF44-201ENST00000274811 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
RNF44-201ENST00000274811 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
RNF44-201ENST00000274811 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
RNF44-201ENST00000274811 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
RNF44-201ENST00000274811 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
RNF44-201ENST00000274811 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
RNF44-201ENST00000274811 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
RNF44-201ENST00000274811 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
RNF44-201ENST00000274811 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
RNF44-201ENST00000274811 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
RNF44-201ENST00000274811 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
RNF44-201ENST00000274811 CENPBP07199 599 aaPredicted RBP21.66■■□□□ 1.06
RNF44-201ENST00000274811 ABCC9O60706 1549 aa21.63■■□□□ 1.05
RNF44-201ENST00000274811 TTBK1Q5TCY1 1321 aaPredicted RBP21.62■■□□□ 1.05
RNF44-201ENST00000274811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
RNF44-201ENST00000274811 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
RNF44-201ENST00000274811 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
RNF44-201ENST00000274811 APLP2Q06481 763 aa21.41■■□□□ 1.02
RNF44-201ENST00000274811 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
RNF44-201ENST00000274811 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
RNF44-201ENST00000274811 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
RNF44-201ENST00000274811 NACADO15069 1562 aa21.2■□□□□ 0.98
RNF44-201ENST00000274811 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
RNF44-201ENST00000274811 MYT1Q01538 1121 aa21.15■□□□□ 0.98
RNF44-201ENST00000274811 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
RNF44-201ENST00000274811 GTF3C3Q9Y5Q9 886 aa21.12■□□□□ 0.97
RNF44-201ENST00000274811 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
RNF44-201ENST00000274811 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.96
RNF44-201ENST00000274811 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
RNF44-201ENST00000274811 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
RNF44-201ENST00000274811 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
RNF44-201ENST00000274811 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
RNF44-201ENST00000274811 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
RNF44-201ENST00000274811 CEP162Q5TB80 1403 aa20.96■□□□□ 0.95
RNF44-201ENST00000274811 WIZO95785 1651 aa20.93■□□□□ 0.94
RNF44-201ENST00000274811 EEA1Q15075 1411 aa20.92■□□□□ 0.94
RNF44-201ENST00000274811 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
RNF44-201ENST00000274811 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
RNF44-201ENST00000274811 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.91
RNF44-201ENST00000274811 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
RNF44-201ENST00000274811 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
RNF44-201ENST00000274811 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
RNF44-201ENST00000274811 SOGA1O94964 1423 aa20.73■□□□□ 0.91
RNF44-201ENST00000274811 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
RNF44-201ENST00000274811 CLIP1P30622 1438 aa20.66■□□□□ 0.9
RNF44-201ENST00000274811 MIER1Q8N108 512 aa20.61■□□□□ 0.89
RNF44-201ENST00000274811 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
RNF44-201ENST00000274811 ITGAEP38570 1179 aa20.54■□□□□ 0.88
RNF44-201ENST00000274811 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
RNF44-201ENST00000274811 SMARCA2P51531 1590 aa20.49■□□□□ 0.87
RNF44-201ENST00000274811 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
RNF44-201ENST00000274811 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
RNF44-201ENST00000274811 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
RNF44-201ENST00000274811 ATP1B4Q9UN42 357 aaPredicted RBP20.42■□□□□ 0.86
RNF44-201ENST00000274811 NEFLP07196 543 aa20.42■□□□□ 0.86
RNF44-201ENST00000274811 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
RNF44-201ENST00000274811 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
RNF44-201ENST00000274811 FAM50AQ14320 339 aaKnown RBP20.23■□□□□ 0.83
RNF44-201ENST00000274811 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
RNF44-201ENST00000274811 KIF21BO75037 1637 aa20.19■□□□□ 0.82
RNF44-201ENST00000274811 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
RNF44-201ENST00000274811 BCANQ96GW7 911 aa20.11■□□□□ 0.81
RNF44-201ENST00000274811 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
RNF44-201ENST00000274811 ANP32CO43423 234 aa20.09■□□□□ 0.81
RNF44-201ENST00000274811 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.81
RNF44-201ENST00000274811 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.81
RNF44-201ENST00000274811 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.8
RNF44-201ENST00000274811 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
RNF44-201ENST00000274811 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
RNF44-201ENST00000274811 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
RNF44-201ENST00000274811 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
RNF44-201ENST00000274811 FKBP8Q14318 412 aa19.99■□□□□ 0.79
RNF44-201ENST00000274811 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
RNF44-201ENST00000274811 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
RNF44-201ENST00000274811 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
RNF44-201ENST00000274811 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
RNF44-201ENST00000274811 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
RNF44-201ENST00000274811 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
RNF44-201ENST00000274811 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
RNF44-201ENST00000274811 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
RNF44-201ENST00000274811 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
RNF44-201ENST00000274811 TRIM52Q96A61 297 aa19.83■□□□□ 0.76
RNF44-201ENST00000274811 SIN3AQ96ST3 1273 aa19.82■□□□□ 0.76
RNF44-201ENST00000274811 PRXQ9BXM0 1461 aa19.82■□□□□ 0.76
RNF44-201ENST00000274811 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
RNF44-201ENST00000274811 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
RNF44-201ENST00000274811 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
RNF44-201ENST00000274811 CUX2O14529 1486 aa19.81■□□□□ 0.76
RNF44-201ENST00000274811 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms