RNA–Protein interactions for RNA: ENST00000504160.1

RNF44-202, Transcript of ring finger protein 44, humanhuman

TSL 3

Gene RNF44, Length 887 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-202ENST00000504160 NISCHQ9Y2I1 1504 aa41.51■■■■■ 4.24
RNF44-202ENST00000504160 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
RNF44-202ENST00000504160 ABCC9O60706 1549 aa36.32■■■■□ 3.4
RNF44-202ENST00000504160 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
RNF44-202ENST00000504160 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
RNF44-202ENST00000504160 NACADO15069 1562 aa34.77■■■■□ 3.16
RNF44-202ENST00000504160 ZCCHC6Q5VYS8 1495 aaKnown RBP34.54■■■■□ 3.12
RNF44-202ENST00000504160 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
RNF44-202ENST00000504160 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
RNF44-202ENST00000504160 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
RNF44-202ENST00000504160 PABPN1Q86U42 306 aaKnown RBP eCLIP33.96■■■■□ 3.03
RNF44-202ENST00000504160 SCRIBQ14160 1630 aa33.75■■■□□ 2.99
RNF44-202ENST00000504160 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
RNF44-202ENST00000504160 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
RNF44-202ENST00000504160 DNAJC5BQ9UF47 199 aa33.37■■■□□ 2.93
RNF44-202ENST00000504160 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
RNF44-202ENST00000504160 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
RNF44-202ENST00000504160 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
RNF44-202ENST00000504160 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
RNF44-202ENST00000504160 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
RNF44-202ENST00000504160 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
RNF44-202ENST00000504160 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
RNF44-202ENST00000504160 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
RNF44-202ENST00000504160 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
RNF44-202ENST00000504160 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
RNF44-202ENST00000504160 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
RNF44-202ENST00000504160 BAZ1BQ9UIG0 1483 aaKnown RBP31.87■■■□□ 2.69
RNF44-202ENST00000504160 WIZO95785 1651 aa31.64■■■□□ 2.66
RNF44-202ENST00000504160 RSF1Q96T23 1441 aaPredicted RBP31.6■■■□□ 2.65
RNF44-202ENST00000504160 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
RNF44-202ENST00000504160 NESP48681 1621 aa31.36■■■□□ 2.61
RNF44-202ENST00000504160 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
RNF44-202ENST00000504160 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
RNF44-202ENST00000504160 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
RNF44-202ENST00000504160 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
RNF44-202ENST00000504160 CUX2O14529 1486 aa30.98■■■□□ 2.55
RNF44-202ENST00000504160 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
RNF44-202ENST00000504160 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.54
RNF44-202ENST00000504160 CFTRP13569 1480 aa30.94■■■□□ 2.54
RNF44-202ENST00000504160 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
RNF44-202ENST00000504160 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
RNF44-202ENST00000504160 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.53
RNF44-202ENST00000504160 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
RNF44-202ENST00000504160 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
RNF44-202ENST00000504160 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
RNF44-202ENST00000504160 WDR62O43379 1518 aa30.63■■■□□ 2.49
RNF44-202ENST00000504160 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
RNF44-202ENST00000504160 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
RNF44-202ENST00000504160 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
RNF44-202ENST00000504160 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
RNF44-202ENST00000504160 DNAJC5Q9H3Z4 198 aa30.19■■■□□ 2.42
RNF44-202ENST00000504160 IFT140Q96RY7 1462 aa30.15■■■□□ 2.42
RNF44-202ENST00000504160 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
RNF44-202ENST00000504160 CUX1P39880 1505 aa30.02■■■□□ 2.4
RNF44-202ENST00000504160 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.39
RNF44-202ENST00000504160 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
RNF44-202ENST00000504160 SOGA1O94964 1423 aa29.96■■■□□ 2.39
RNF44-202ENST00000504160 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
RNF44-202ENST00000504160 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
RNF44-202ENST00000504160 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
RNF44-202ENST00000504160 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.376e-8■■■■■ 42.4
RNF44-202ENST00000504160 WRNQ14191 1432 aaPredicted RBP eCLIP29.84■■■□□ 2.37
RNF44-202ENST00000504160 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
RNF44-202ENST00000504160 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
RNF44-202ENST00000504160 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
RNF44-202ENST00000504160 SYNJ1O43426 1573 aa29.72■■■□□ 2.35
RNF44-202ENST00000504160 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
RNF44-202ENST00000504160 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
RNF44-202ENST00000504160 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
RNF44-202ENST00000504160 FBLN2P98095 1184 aa29.63■■■□□ 2.33
RNF44-202ENST00000504160 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
RNF44-202ENST00000504160 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
RNF44-202ENST00000504160 SNAPC4Q5SXM2 1469 aa29.58■■■□□ 2.33
RNF44-202ENST00000504160 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
RNF44-202ENST00000504160 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
RNF44-202ENST00000504160 CHMP7Q8WUX9 453 aaPredicted RBP29.5■■■□□ 2.31
RNF44-202ENST00000504160 CHD1O14646 1710 aa29.5■■■□□ 2.31
RNF44-202ENST00000504160 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
RNF44-202ENST00000504160 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
RNF44-202ENST00000504160 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
RNF44-202ENST00000504160 ADAMTS12P58397 1594 aa29.26■■■□□ 2.28
RNF44-202ENST00000504160 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
RNF44-202ENST00000504160 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
RNF44-202ENST00000504160 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
RNF44-202ENST00000504160 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
RNF44-202ENST00000504160 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
RNF44-202ENST00000504160 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.27
RNF44-202ENST00000504160 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.27
RNF44-202ENST00000504160 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.27
RNF44-202ENST00000504160 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
RNF44-202ENST00000504160 IGF1RP08069 1367 aa29.09■■■□□ 2.25
RNF44-202ENST00000504160 NUP160Q12769 1436 aa29.05■■■□□ 2.24
RNF44-202ENST00000504160 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
RNF44-202ENST00000504160 CYB5RLQ6IPT4 315 aa29.03■■■□□ 2.24
RNF44-202ENST00000504160 CUL7Q14999 1698 aa29.01■■■□□ 2.23
RNF44-202ENST00000504160 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
RNF44-202ENST00000504160 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
RNF44-202ENST00000504160 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
RNF44-202ENST00000504160 JPH4Q96JJ6 628 aa28.83■■■□□ 2.21
RNF44-202ENST00000504160 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms