RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
SCAF11-202ENST00000369367 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
SCAF11-202ENST00000369367 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SCAF11-202ENST00000369367 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
SCAF11-202ENST00000369367 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.15
SCAF11-202ENST00000369367 APLP2Q06481 763 aa15.71■□□□□ 0.11
SCAF11-202ENST00000369367 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
SCAF11-202ENST00000369367 TRIM41Q8WV44 630 aa15.21■□□□□ 0.02
SCAF11-202ENST00000369367 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-202ENST00000369367 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
SCAF11-202ENST00000369367 UBTFP17480 764 aaKnown RBP15.05■□□□□ 0
SCAF11-202ENST00000369367 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
SCAF11-202ENST00000369367 ABCC9O60706 1549 aa14.95□□□□□ -0.02
SCAF11-202ENST00000369367 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-202ENST00000369367 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.04
SCAF11-202ENST00000369367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
SCAF11-202ENST00000369367 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
SCAF11-202ENST00000369367 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
SCAF11-202ENST00000369367 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF11-202ENST00000369367 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
SCAF11-202ENST00000369367 CCER1Q8TC90 406 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-202ENST00000369367 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
SCAF11-202ENST00000369367 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
SCAF11-202ENST00000369367 FBLN2P98095 1184 aa14.36□□□□□ -0.11
SCAF11-202ENST00000369367 ITGAEP38570 1179 aa14.33□□□□□ -0.12
SCAF11-202ENST00000369367 NEFLP07196 543 aa14.3□□□□□ -0.12
SCAF11-202ENST00000369367 TRIM26Q12899 539 aaPredicted RBP14.29□□□□□ -0.12
SCAF11-202ENST00000369367 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.12
SCAF11-202ENST00000369367 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
SCAF11-202ENST00000369367 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
SCAF11-202ENST00000369367 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
SCAF11-202ENST00000369367 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-202ENST00000369367 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCAF11-202ENST00000369367 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
SCAF11-202ENST00000369367 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
SCAF11-202ENST00000369367 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
SCAF11-202ENST00000369367 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
SCAF11-202ENST00000369367 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
SCAF11-202ENST00000369367 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
SCAF11-202ENST00000369367 ESF1Q9H501 851 aaKnown RBP14.09□□□□□ -0.15
SCAF11-202ENST00000369367 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
SCAF11-202ENST00000369367 NACADO15069 1562 aa14.05□□□□□ -0.16
SCAF11-202ENST00000369367 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
SCAF11-202ENST00000369367 BCANQ96GW7 911 aa13.96□□□□□ -0.17
SCAF11-202ENST00000369367 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-202ENST00000369367 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-202ENST00000369367 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
SCAF11-202ENST00000369367 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
SCAF11-202ENST00000369367 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-202ENST00000369367 NEFMP07197 916 aa13.86□□□□□ -0.19
SCAF11-202ENST00000369367 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
SCAF11-202ENST00000369367 ARID3CA6NKF2 412 aa13.81□□□□□ -0.2
SCAF11-202ENST00000369367 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
SCAF11-202ENST00000369367 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-202ENST00000369367 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
SCAF11-202ENST00000369367 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
SCAF11-202ENST00000369367 ERCC6Q03468 1493 aa13.77□□□□□ -0.21
SCAF11-202ENST00000369367 HRCP23327 699 aa13.76□□□□□ -0.21
SCAF11-202ENST00000369367 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
SCAF11-202ENST00000369367 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
SCAF11-202ENST00000369367 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-202ENST00000369367 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
SCAF11-202ENST00000369367 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
SCAF11-202ENST00000369367 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
SCAF11-202ENST00000369367 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
SCAF11-202ENST00000369367 EEA1Q15075 1411 aa13.67□□□□□ -0.22
SCAF11-202ENST00000369367 ANP32CO43423 234 aa13.67□□□□□ -0.22
SCAF11-202ENST00000369367 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
SCAF11-202ENST00000369367 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
SCAF11-202ENST00000369367 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-202ENST00000369367 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
SCAF11-202ENST00000369367 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
SCAF11-202ENST00000369367 PLPPR3Q6T4P5 718 aa13.59□□□□□ -0.23
SCAF11-202ENST00000369367 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
SCAF11-202ENST00000369367 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
SCAF11-202ENST00000369367 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
SCAF11-202ENST00000369367 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
SCAF11-202ENST00000369367 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
SCAF11-202ENST00000369367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.243e-8■■■■□ 20.1
SCAF11-202ENST00000369367 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
SCAF11-202ENST00000369367 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
SCAF11-202ENST00000369367 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-202ENST00000369367 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-202ENST00000369367 ARID4BQ4LE39 1312 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-202ENST00000369367 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
SCAF11-202ENST00000369367 CLIP1P30622 1438 aa13.48□□□□□ -0.25
SCAF11-202ENST00000369367 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
SCAF11-202ENST00000369367 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
SCAF11-202ENST00000369367 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
SCAF11-202ENST00000369367 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
SCAF11-202ENST00000369367 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
SCAF11-202ENST00000369367 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
SCAF11-202ENST00000369367 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
SCAF11-202ENST00000369367 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
SCAF11-202ENST00000369367 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
SCAF11-202ENST00000369367 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
SCAF11-202ENST00000369367 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
SCAF11-202ENST00000369367 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
SCAF11-202ENST00000369367 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
SCAF11-202ENST00000369367 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms