RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
SEC16A-203ENST00000313050 MYT1Q01538 1121 aa17.69■□□□□ 0.42
SEC16A-203ENST00000313050 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
SEC16A-203ENST00000313050 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
SEC16A-203ENST00000313050 TTBK1Q5TCY1 1321 aaPredicted RBP16.75■□□□□ 0.27
SEC16A-203ENST00000313050 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.25
SEC16A-203ENST00000313050 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
SEC16A-203ENST00000313050 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
SEC16A-203ENST00000313050 NEFLP07196 543 aa16.15■□□□□ 0.18
SEC16A-203ENST00000313050 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
SEC16A-203ENST00000313050 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
SEC16A-203ENST00000313050 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
SEC16A-203ENST00000313050 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SEC16A-203ENST00000313050 APLP2Q06481 763 aa15.79■□□□□ 0.12
SEC16A-203ENST00000313050 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
SEC16A-203ENST00000313050 GLIPR1L2Q4G1C9 344 aa15.68■□□□□ 0.1
SEC16A-203ENST00000313050 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
SEC16A-203ENST00000313050 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
SEC16A-203ENST00000313050 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
SEC16A-203ENST00000313050 FAM9AQ8IZU1 332 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-203ENST00000313050 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
SEC16A-203ENST00000313050 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
SEC16A-203ENST00000313050 HRCP23327 699 aa15.11■□□□□ 0.01
SEC16A-203ENST00000313050 MYT1LQ9UL68 1186 aa15.1■□□□□ 0.01
SEC16A-203ENST00000313050 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
SEC16A-203ENST00000313050 ANP32BQ92688 251 aaKnown RBP15.02■□□□□ -0
SEC16A-203ENST00000313050 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
SEC16A-203ENST00000313050 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
SEC16A-203ENST00000313050 NISCHQ9Y2I1 1504 aa14.93□□□□□ -0.02
SEC16A-203ENST00000313050 ANP32AP39687 249 aaKnown RBP14.93□□□□□ -0.02
SEC16A-203ENST00000313050 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
SEC16A-203ENST00000313050 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
SEC16A-203ENST00000313050 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
SEC16A-203ENST00000313050 CDK11BP21127 795 aaKnown RBP14.75□□□□□ -0.05
SEC16A-203ENST00000313050 BCANQ96GW7 911 aa14.74□□□□□ -0.05
SEC16A-203ENST00000313050 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
SEC16A-203ENST00000313050 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
SEC16A-203ENST00000313050 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
SEC16A-203ENST00000313050 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
SEC16A-203ENST00000313050 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
SEC16A-203ENST00000313050 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
SEC16A-203ENST00000313050 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
SEC16A-203ENST00000313050 NBR1Q14596 966 aa14.58□□□□□ -0.08
SEC16A-203ENST00000313050 HSP90AA1P07900 732 aaKnown RBP14.56□□□□□ -0.08
SEC16A-203ENST00000313050 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
SEC16A-203ENST00000313050 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
SEC16A-203ENST00000313050 NPM2Q86SE8 214 aaKnown RBP14.54□□□□□ -0.08
SEC16A-203ENST00000313050 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
SEC16A-203ENST00000313050 UPF2Q9HAU5 1272 aaKnown RBP14.48□□□□□ -0.09
SEC16A-203ENST00000313050 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
SEC16A-203ENST00000313050 ANP32CO43423 234 aa14.43□□□□□ -0.1
SEC16A-203ENST00000313050 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
SEC16A-203ENST00000313050 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
SEC16A-203ENST00000313050 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
SEC16A-203ENST00000313050 BCL11AQ9H165 835 aa14.41□□□□□ -0.1
SEC16A-203ENST00000313050 ARXQ96QS3 562 aa14.41□□□□□ -0.1
SEC16A-203ENST00000313050 ANP32EQ9BTT0 268 aa14.37□□□□□ -0.11
SEC16A-203ENST00000313050 NAP1L5Q96NT1 182 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-203ENST00000313050 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.11
SEC16A-203ENST00000313050 ITGAEP38570 1179 aa14.3□□□□□ -0.12
SEC16A-203ENST00000313050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.12
SEC16A-203ENST00000313050 DNTTIP2Q5QJE6 756 aaKnown RBP14.27□□□□□ -0.13
SEC16A-203ENST00000313050 NEFMP07197 916 aa14.26□□□□□ -0.13
SEC16A-203ENST00000313050 FKBP8Q14318 412 aa14.25□□□□□ -0.13
SEC16A-203ENST00000313050 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
SEC16A-203ENST00000313050 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
SEC16A-203ENST00000313050 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
SEC16A-203ENST00000313050 CALRP27797 417 aaKnown RBP14.17□□□□□ -0.14
SEC16A-203ENST00000313050 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
SEC16A-203ENST00000313050 TNNT3P45378 269 aaPredicted RBP14.15□□□□□ -0.14
SEC16A-203ENST00000313050 BECN1Q14457 450 aa14.15□□□□□ -0.14
SEC16A-203ENST00000313050 GOLGA6L22H0YM25 854 aa14.13□□□□□ -0.15
SEC16A-203ENST00000313050 PTMSP20962 102 aa14.11□□□□□ -0.15
SEC16A-203ENST00000313050 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
SEC16A-203ENST00000313050 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
SEC16A-203ENST00000313050 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
SEC16A-203ENST00000313050 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
SEC16A-203ENST00000313050 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
SEC16A-203ENST00000313050 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
SEC16A-203ENST00000313050 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
SEC16A-203ENST00000313050 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
SEC16A-203ENST00000313050 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
SEC16A-203ENST00000313050 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
SEC16A-203ENST00000313050 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
SEC16A-203ENST00000313050 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
SEC16A-203ENST00000313050 NRDCO43847 1150 aa13.93□□□□□ -0.18
SEC16A-203ENST00000313050 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
SEC16A-203ENST00000313050 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
SEC16A-203ENST00000313050 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEC16A-203ENST00000313050 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
SEC16A-203ENST00000313050 SETQ01105 290 aaPredicted RBP13.88□□□□□ -0.19
SEC16A-203ENST00000313050 LOC105371045A0A1W2PR82 267 aa13.87□□□□□ -0.19
SEC16A-203ENST00000313050 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
SEC16A-203ENST00000313050 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
SEC16A-203ENST00000313050 APPP05067 770 aa13.86□□□□□ -0.19
SEC16A-203ENST00000313050 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
SEC16A-203ENST00000313050 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
SEC16A-203ENST00000313050 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
SEC16A-203ENST00000313050 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
SEC16A-203ENST00000313050 PNNQ9H307 717 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms