RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
CALCOCO1-203ENST00000546443 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
CALCOCO1-203ENST00000546443 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
CALCOCO1-203ENST00000546443 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
CALCOCO1-203ENST00000546443 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
CALCOCO1-203ENST00000546443 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
CALCOCO1-203ENST00000546443 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
CALCOCO1-203ENST00000546443 ABCC9O60706 1549 aa27.65■■■□□ 2.02
CALCOCO1-203ENST00000546443 NACADO15069 1562 aa27.46■■□□□ 1.99
CALCOCO1-203ENST00000546443 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
CALCOCO1-203ENST00000546443 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.94
CALCOCO1-203ENST00000546443 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
CALCOCO1-203ENST00000546443 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
CALCOCO1-203ENST00000546443 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
CALCOCO1-203ENST00000546443 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
CALCOCO1-203ENST00000546443 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.81
CALCOCO1-203ENST00000546443 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
CALCOCO1-203ENST00000546443 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
CALCOCO1-203ENST00000546443 WIZO95785 1651 aa26.16■■□□□ 1.78
CALCOCO1-203ENST00000546443 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
CALCOCO1-203ENST00000546443 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
CALCOCO1-203ENST00000546443 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
CALCOCO1-203ENST00000546443 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
CALCOCO1-203ENST00000546443 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
CALCOCO1-203ENST00000546443 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
CALCOCO1-203ENST00000546443 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
CALCOCO1-203ENST00000546443 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
CALCOCO1-203ENST00000546443 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
CALCOCO1-203ENST00000546443 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.66
CALCOCO1-203ENST00000546443 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
CALCOCO1-203ENST00000546443 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
CALCOCO1-203ENST00000546443 NCAPD3P42695 1498 aa25.33■■□□□ 1.65
CALCOCO1-203ENST00000546443 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
CALCOCO1-203ENST00000546443 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
CALCOCO1-203ENST00000546443 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
CALCOCO1-203ENST00000546443 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
CALCOCO1-203ENST00000546443 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.57
CALCOCO1-203ENST00000546443 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
CALCOCO1-203ENST00000546443 CFTRP13569 1480 aa24.85■■□□□ 1.57
CALCOCO1-203ENST00000546443 PRDM2Q13029 1718 aa24.84■■□□□ 1.57
CALCOCO1-203ENST00000546443 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
CALCOCO1-203ENST00000546443 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
CALCOCO1-203ENST00000546443 EEA1Q15075 1411 aa24.73■■□□□ 1.55
CALCOCO1-203ENST00000546443 SOGA1O94964 1423 aa24.72■■□□□ 1.55
CALCOCO1-203ENST00000546443 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
CALCOCO1-203ENST00000546443 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
CALCOCO1-203ENST00000546443 CUX1P39880 1505 aa24.61■■□□□ 1.53
CALCOCO1-203ENST00000546443 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
CALCOCO1-203ENST00000546443 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
CALCOCO1-203ENST00000546443 KIF21BO75037 1637 aa24.45■■□□□ 1.5
CALCOCO1-203ENST00000546443 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
CALCOCO1-203ENST00000546443 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
CALCOCO1-203ENST00000546443 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
CALCOCO1-203ENST00000546443 NESP48681 1621 aa24.4■■□□□ 1.5
CALCOCO1-203ENST00000546443 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
CALCOCO1-203ENST00000546443 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
CALCOCO1-203ENST00000546443 DNAJC5BQ9UF47 199 aa24.33■■□□□ 1.49
CALCOCO1-203ENST00000546443 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
CALCOCO1-203ENST00000546443 CEP162Q5TB80 1403 aa24.27■■□□□ 1.48
CALCOCO1-203ENST00000546443 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
CALCOCO1-203ENST00000546443 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
CALCOCO1-203ENST00000546443 PRXQ9BXM0 1461 aa24.22■■□□□ 1.47
CALCOCO1-203ENST00000546443 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
CALCOCO1-203ENST00000546443 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
CALCOCO1-203ENST00000546443 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
CALCOCO1-203ENST00000546443 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.47
CALCOCO1-203ENST00000546443 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
CALCOCO1-203ENST00000546443 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
CALCOCO1-203ENST00000546443 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
CALCOCO1-203ENST00000546443 CUX2O14529 1486 aa24.14■■□□□ 1.45
CALCOCO1-203ENST00000546443 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
CALCOCO1-203ENST00000546443 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
CALCOCO1-203ENST00000546443 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
CALCOCO1-203ENST00000546443 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
CALCOCO1-203ENST00000546443 WDR97A6NE52 1622 aa24.04■■□□□ 1.44
CALCOCO1-203ENST00000546443 IGF1RP08069 1367 aa24.03■■□□□ 1.44
CALCOCO1-203ENST00000546443 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
CALCOCO1-203ENST00000546443 CLIP1P30622 1438 aa24.01■■□□□ 1.43
CALCOCO1-203ENST00000546443 CARMIL1Q5VZK9 1371 aa23.9■■□□□ 1.42
CALCOCO1-203ENST00000546443 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
CALCOCO1-203ENST00000546443 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
CALCOCO1-203ENST00000546443 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
CALCOCO1-203ENST00000546443 CUL7Q14999 1698 aa23.86■■□□□ 1.41
CALCOCO1-203ENST00000546443 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
CALCOCO1-203ENST00000546443 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
CALCOCO1-203ENST00000546443 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
CALCOCO1-203ENST00000546443 WDR62O43379 1518 aa23.78■■□□□ 1.4
CALCOCO1-203ENST00000546443 HRCP23327 699 aa23.76■■□□□ 1.39
CALCOCO1-203ENST00000546443 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
CALCOCO1-203ENST00000546443 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
CALCOCO1-203ENST00000546443 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
CALCOCO1-203ENST00000546443 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
CALCOCO1-203ENST00000546443 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
CALCOCO1-203ENST00000546443 CTTNBP2Q8WZ74 1663 aa23.67■■□□□ 1.38
CALCOCO1-203ENST00000546443 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
CALCOCO1-203ENST00000546443 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
CALCOCO1-203ENST00000546443 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
CALCOCO1-203ENST00000546443 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
CALCOCO1-203ENST00000546443 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
CALCOCO1-203ENST00000546443 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms