Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 AL451085.2-201ENST00000605085 799 ntBASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 AP000997.3-201ENST00000623333 2250 ntBASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-1A0A075B6T8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 AC055733.4-201ENST00000638462 1354 ntBASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 CROCCP3-202ENST00000420820 1947 ntBASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 PCDHB18P-201ENST00000524813 2368 ntBASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV9-1A0A075B6T8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV9-1A0A075B6T8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 NOC2LP1-202ENST00000452600 2235 ntBASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms