RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 NISCHQ9Y2I1 1504 aa37.37■■■■□ 3.57
CACTIN-201ENST00000221899 SHROOM4Q9ULL8 1493 aa32.45■■■□□ 2.79
CACTIN-201ENST00000221899 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
CACTIN-201ENST00000221899 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
CACTIN-201ENST00000221899 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
CACTIN-201ENST00000221899 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
CACTIN-201ENST00000221899 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
CACTIN-201ENST00000221899 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
CACTIN-201ENST00000221899 HRCP23327 699 aa30.7■■■□□ 2.51
CACTIN-201ENST00000221899 PCGF6Q9BYE7 350 aa30.6■■■□□ 2.49
CACTIN-201ENST00000221899 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
CACTIN-201ENST00000221899 LOC105371045A0A1W2PR82 267 aa30.32■■■□□ 2.44
CACTIN-201ENST00000221899 PPARGC1BQ86YN6 1023 aaKnown RBP30.2■■■□□ 2.43
CACTIN-201ENST00000221899 ABCC9O60706 1549 aa29.94■■■□□ 2.38
CACTIN-201ENST00000221899 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
CACTIN-201ENST00000221899 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
CACTIN-201ENST00000221899 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
CACTIN-201ENST00000221899 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
CACTIN-201ENST00000221899 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
CACTIN-201ENST00000221899 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
CACTIN-201ENST00000221899 EHMT2Q96KQ7 1210 aa29.46■■■□□ 2.31
CACTIN-201ENST00000221899 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
CACTIN-201ENST00000221899 ZEB1P37275 1124 aaPredicted RBP29.19■■■□□ 2.26
CACTIN-201ENST00000221899 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
CACTIN-201ENST00000221899 NACADO15069 1562 aa29.07■■■□□ 2.24
CACTIN-201ENST00000221899 WIZO95785 1651 aa29.04■■■□□ 2.24
CACTIN-201ENST00000221899 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
CACTIN-201ENST00000221899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.68■■■□□ 2.18
CACTIN-201ENST00000221899 EIF4G1Q04637 1599 aaKnown RBP28.66■■■□□ 2.18
CACTIN-201ENST00000221899 CCER1Q8TC90 406 aaPredicted RBP28.58■■■□□ 2.17
CACTIN-201ENST00000221899 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
CACTIN-201ENST00000221899 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
CACTIN-201ENST00000221899 SCAF1Q9H7N4 1312 aaKnown RBP28.57■■■□□ 2.16
CACTIN-201ENST00000221899 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
CACTIN-201ENST00000221899 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
CACTIN-201ENST00000221899 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
CACTIN-201ENST00000221899 SOGA1O94964 1423 aa28.37■■■□□ 2.13
CACTIN-201ENST00000221899 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
CACTIN-201ENST00000221899 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
CACTIN-201ENST00000221899 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.125e-6■■■■■ 54.3
CACTIN-201ENST00000221899 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
CACTIN-201ENST00000221899 UBTFP17480 764 aaKnown RBP28.23■■■□□ 2.11
CACTIN-201ENST00000221899 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
CACTIN-201ENST00000221899 TNIKQ9UKE5 1360 aa28.2■■■□□ 2.11
CACTIN-201ENST00000221899 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
CACTIN-201ENST00000221899 DIEXFQ68CQ4 756 aaKnown RBP28.17■■■□□ 2.1
CACTIN-201ENST00000221899 PELP1Q8IZL8 1130 aaKnown RBP28.15■■■□□ 2.1
CACTIN-201ENST00000221899 NEUROD1Q13562 356 aa28.13■■■□□ 2.09
CACTIN-201ENST00000221899 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
CACTIN-201ENST00000221899 PABPN1Q86U42 306 aaKnown RBP eCLIP28.09■■■□□ 2.09
CACTIN-201ENST00000221899 EEA1Q15075 1411 aa28.06■■■□□ 2.08
CACTIN-201ENST00000221899 GOLGA3Q08378 1498 aa28■■■□□ 2.07
CACTIN-201ENST00000221899 CENPBP07199 599 aaPredicted RBP27.89■■■□□ 2.06
CACTIN-201ENST00000221899 GTF3C3Q9Y5Q9 886 aa27.89■■■□□ 2.06
CACTIN-201ENST00000221899 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
CACTIN-201ENST00000221899 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
CACTIN-201ENST00000221899 ZNF316A6NFI3 1004 aaPredicted RBP27.83■■■□□ 2.05
CACTIN-201ENST00000221899 SYNJ1O43426 1573 aa27.83■■■□□ 2.04
CACTIN-201ENST00000221899 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
CACTIN-201ENST00000221899 RANGAP1P46060 587 aaPredicted RBP27.77■■■□□ 2.04
CACTIN-201ENST00000221899 CLIP1P30622 1438 aa27.75■■■□□ 2.03
CACTIN-201ENST00000221899 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
CACTIN-201ENST00000221899 KIF21BO75037 1637 aa27.7■■■□□ 2.02
CACTIN-201ENST00000221899 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
CACTIN-201ENST00000221899 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
CACTIN-201ENST00000221899 APLP2Q06481 763 aa27.62■■■□□ 2.01
CACTIN-201ENST00000221899 VPS8Q8N3P4 1428 aa27.62■■■□□ 2.01
CACTIN-201ENST00000221899 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
CACTIN-201ENST00000221899 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
CACTIN-201ENST00000221899 MIER1Q8N108 512 aa27.55■■■□□ 2
CACTIN-201ENST00000221899 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
CACTIN-201ENST00000221899 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
CACTIN-201ENST00000221899 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
CACTIN-201ENST00000221899 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
CACTIN-201ENST00000221899 PRXQ9BXM0 1461 aa27.21■■□□□ 1.95
CACTIN-201ENST00000221899 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.95
CACTIN-201ENST00000221899 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
CACTIN-201ENST00000221899 CUX1P39880 1505 aa27.1■■□□□ 1.93
CACTIN-201ENST00000221899 CLSPNQ9HAW4 1339 aa27.08■■□□□ 1.93
CACTIN-201ENST00000221899 ITGAEP38570 1179 aa27.05■■□□□ 1.92
CACTIN-201ENST00000221899 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
CACTIN-201ENST00000221899 RRBP1Q9P2E9 1410 aaKnown RBP26.99■■□□□ 1.91
CACTIN-201ENST00000221899 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.9
CACTIN-201ENST00000221899 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
CACTIN-201ENST00000221899 CCNB3Q8WWL7 1395 aa26.93■■□□□ 1.9
CACTIN-201ENST00000221899 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
CACTIN-201ENST00000221899 CFTRP13569 1480 aa26.86■■□□□ 1.89
CACTIN-201ENST00000221899 CUX2O14529 1486 aa26.82■■□□□ 1.88
CACTIN-201ENST00000221899 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
CACTIN-201ENST00000221899 SUPT16HQ9Y5B9 1047 aaKnown RBP26.75■■□□□ 1.87
CACTIN-201ENST00000221899 IGF1RP08069 1367 aa26.74■■□□□ 1.87
CACTIN-201ENST00000221899 MYT1Q01538 1121 aa26.72■■□□□ 1.87
CACTIN-201ENST00000221899 KCNH8Q96L42 1107 aa26.68■■□□□ 1.86
CACTIN-201ENST00000221899 TIAM1Q13009 1591 aa26.68■■□□□ 1.86
CACTIN-201ENST00000221899 MAPKBP1O60336 1514 aa26.68■■□□□ 1.86
CACTIN-201ENST00000221899 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
CACTIN-201ENST00000221899 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
CACTIN-201ENST00000221899 FAM50AQ14320 339 aaKnown RBP26.65■■□□□ 1.86
CACTIN-201ENST00000221899 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
CACTIN-201ENST00000221899 PHLDB1Q86UU1 1377 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms