RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 NISCHQ9Y2I1 1504 aa32.14■■■□□ 2.74
ZIC1-201ENST00000282928 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
ZIC1-201ENST00000282928 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
ZIC1-201ENST00000282928 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
ZIC1-201ENST00000282928 FAM9AQ8IZU1 332 aaPredicted RBP29.14■■■□□ 2.26
ZIC1-201ENST00000282928 APLP2Q06481 763 aa28.71■■■□□ 2.19
ZIC1-201ENST00000282928 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
ZIC1-201ENST00000282928 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
ZIC1-201ENST00000282928 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
ZIC1-201ENST00000282928 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
ZIC1-201ENST00000282928 ZEB1P37275 1124 aaPredicted RBP27.48■■□□□ 1.99
ZIC1-201ENST00000282928 ABCC9O60706 1549 aa27.45■■□□□ 1.98
ZIC1-201ENST00000282928 ATP1B4Q9UN42 357 aaPredicted RBP27.3■■□□□ 1.96
ZIC1-201ENST00000282928 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
ZIC1-201ENST00000282928 RANGAP1P46060 587 aaPredicted RBP27.1■■□□□ 1.93
ZIC1-201ENST00000282928 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
ZIC1-201ENST00000282928 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
ZIC1-201ENST00000282928 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
ZIC1-201ENST00000282928 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
ZIC1-201ENST00000282928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.73■■□□□ 1.87
ZIC1-201ENST00000282928 HNRNPUL2Q1KMD3 747 aaKnown RBP26.73■■□□□ 1.87
ZIC1-201ENST00000282928 CENPBP07199 599 aaPredicted RBP26.69■■□□□ 1.86
ZIC1-201ENST00000282928 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
ZIC1-201ENST00000282928 MYT1LQ9UL68 1186 aa26.6■■□□□ 1.85
ZIC1-201ENST00000282928 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
ZIC1-201ENST00000282928 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.84
ZIC1-201ENST00000282928 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
ZIC1-201ENST00000282928 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
ZIC1-201ENST00000282928 NACADO15069 1562 aa26.33■■□□□ 1.81
ZIC1-201ENST00000282928 NEFLP07196 543 aa26.27■■□□□ 1.8
ZIC1-201ENST00000282928 CDK11AQ9UQ88 783 aaPredicted RBP26.06■■□□□ 1.76
ZIC1-201ENST00000282928 ITGAEP38570 1179 aa26.05■■□□□ 1.76
ZIC1-201ENST00000282928 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
ZIC1-201ENST00000282928 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
ZIC1-201ENST00000282928 FBLN2P98095 1184 aa25.95■■□□□ 1.75
ZIC1-201ENST00000282928 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
ZIC1-201ENST00000282928 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
ZIC1-201ENST00000282928 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.73
ZIC1-201ENST00000282928 MYT1Q01538 1121 aa25.85■■□□□ 1.73
ZIC1-201ENST00000282928 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
ZIC1-201ENST00000282928 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
ZIC1-201ENST00000282928 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
ZIC1-201ENST00000282928 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
ZIC1-201ENST00000282928 EEA1Q15075 1411 aa25.66■■□□□ 1.7
ZIC1-201ENST00000282928 POLR3GLQ9BT43 218 aa25.64■■□□□ 1.7
ZIC1-201ENST00000282928 HRCP23327 699 aa25.59■■□□□ 1.69
ZIC1-201ENST00000282928 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
ZIC1-201ENST00000282928 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
ZIC1-201ENST00000282928 ESF1Q9H501 851 aaKnown RBP25.5■■□□□ 1.67
ZIC1-201ENST00000282928 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
ZIC1-201ENST00000282928 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
ZIC1-201ENST00000282928 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
ZIC1-201ENST00000282928 DAXXQ9UER7 740 aaPredicted RBP25.37■■□□□ 1.65
ZIC1-201ENST00000282928 YTHDC1Q96MU7 727 aaKnown RBP25.36■■□□□ 1.65
ZIC1-201ENST00000282928 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
ZIC1-201ENST00000282928 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
ZIC1-201ENST00000282928 NEFMP07197 916 aa25.26■■□□□ 1.63
ZIC1-201ENST00000282928 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
ZIC1-201ENST00000282928 ZNF777Q9ULD5 760 aaPredicted RBP25.22■■□□□ 1.63
ZIC1-201ENST00000282928 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
ZIC1-201ENST00000282928 NEUROD1Q13562 356 aa25.2■■□□□ 1.62
ZIC1-201ENST00000282928 SMARCA2P51531 1590 aa25.19■■□□□ 1.62
ZIC1-201ENST00000282928 ANP32CO43423 234 aa25.19■■□□□ 1.62
ZIC1-201ENST00000282928 ERCC6Q03468 1493 aa25.17■■□□□ 1.62
ZIC1-201ENST00000282928 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
ZIC1-201ENST00000282928 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
ZIC1-201ENST00000282928 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
ZIC1-201ENST00000282928 BCANQ96GW7 911 aa25.15■■□□□ 1.62
ZIC1-201ENST00000282928 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
ZIC1-201ENST00000282928 DIEXFQ68CQ4 756 aaKnown RBP25.09■■□□□ 1.61
ZIC1-201ENST00000282928 STAG3Q9UJ98 1225 aa25.07■■□□□ 1.6
ZIC1-201ENST00000282928 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
ZIC1-201ENST00000282928 CLIP1P30622 1438 aa25.05■■□□□ 1.6
ZIC1-201ENST00000282928 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
ZIC1-201ENST00000282928 PLEKHD1A6NEE1 506 aa25.01■■□□□ 1.59
ZIC1-201ENST00000282928 ZBTB47Q9UFB7 747 aaPredicted RBP25■■□□□ 1.59
ZIC1-201ENST00000282928 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
ZIC1-201ENST00000282928 TONSLQ96HA7 1378 aa25■■□□□ 1.59
ZIC1-201ENST00000282928 ARID3CA6NKF2 412 aa24.98■■□□□ 1.59
ZIC1-201ENST00000282928 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
ZIC1-201ENST00000282928 CLSPNQ9HAW4 1339 aa24.87■■□□□ 1.57
ZIC1-201ENST00000282928 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
ZIC1-201ENST00000282928 CNGB1Q14028 1251 aaPredicted RBP24.84■■□□□ 1.57
ZIC1-201ENST00000282928 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
ZIC1-201ENST00000282928 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
ZIC1-201ENST00000282928 CEP162Q5TB80 1403 aa24.68■■□□□ 1.54
ZIC1-201ENST00000282928 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
ZIC1-201ENST00000282928 CANXP27824 592 aaKnown RBP24.68■■□□□ 1.54
ZIC1-201ENST00000282928 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
ZIC1-201ENST00000282928 TOP2AP11388 1531 aaKnown RBP24.64■■□□□ 1.54
ZIC1-201ENST00000282928 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
ZIC1-201ENST00000282928 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
ZIC1-201ENST00000282928 SLC24A1O60721 1099 aa24.63■■□□□ 1.53
ZIC1-201ENST00000282928 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
ZIC1-201ENST00000282928 CUX2O14529 1486 aa24.61■■□□□ 1.53
ZIC1-201ENST00000282928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
ZIC1-201ENST00000282928 CDCA8Q53HL2 280 aa24.58■■□□□ 1.53
ZIC1-201ENST00000282928 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
ZIC1-201ENST00000282928 CHIC2Q9UKJ5 165 aa24.54■■□□□ 1.52
ZIC1-201ENST00000282928 MROH2BQ7Z745 1585 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms