RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
CHPF-201ENST00000243776 SHROOM4Q9ULL8 1493 aa32.53■■■□□ 2.8
CHPF-201ENST00000243776 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
CHPF-201ENST00000243776 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
CHPF-201ENST00000243776 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
CHPF-201ENST00000243776 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
CHPF-201ENST00000243776 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
CHPF-201ENST00000243776 PCGF6Q9BYE7 350 aa30.98■■■□□ 2.55
CHPF-201ENST00000243776 HRCP23327 699 aa30.98■■■□□ 2.55
CHPF-201ENST00000243776 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
CHPF-201ENST00000243776 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
CHPF-201ENST00000243776 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
CHPF-201ENST00000243776 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
CHPF-201ENST00000243776 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
CHPF-201ENST00000243776 TRIM26Q12899 539 aaPredicted RBP29.89■■■□□ 2.38
CHPF-201ENST00000243776 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
CHPF-201ENST00000243776 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
CHPF-201ENST00000243776 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
CHPF-201ENST00000243776 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
CHPF-201ENST00000243776 ABCC9O60706 1549 aa29.35■■■□□ 2.29
CHPF-201ENST00000243776 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
CHPF-201ENST00000243776 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.27
CHPF-201ENST00000243776 SCAF1Q9H7N4 1312 aaKnown RBP29.05■■■□□ 2.24
CHPF-201ENST00000243776 TTBK1Q5TCY1 1321 aaPredicted RBP28.99■■■□□ 2.23
CHPF-201ENST00000243776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
CHPF-201ENST00000243776 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
CHPF-201ENST00000243776 CCER1Q8TC90 406 aaPredicted RBP28.82■■■□□ 2.2
CHPF-201ENST00000243776 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
CHPF-201ENST00000243776 WIZO95785 1651 aa28.62■■■□□ 2.17
CHPF-201ENST00000243776 NEUROD1Q13562 356 aa28.55■■■□□ 2.16
CHPF-201ENST00000243776 PELP1Q8IZL8 1130 aaKnown RBP28.53■■■□□ 2.16
CHPF-201ENST00000243776 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
CHPF-201ENST00000243776 DIEXFQ68CQ4 756 aaKnown RBP28.44■■■□□ 2.14
CHPF-201ENST00000243776 GTF3C3Q9Y5Q9 886 aa28.34■■■□□ 2.13
CHPF-201ENST00000243776 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
CHPF-201ENST00000243776 NACADO15069 1562 aa28.29■■■□□ 2.12
CHPF-201ENST00000243776 CCDC88BA6NC98 1476 aa28.28■■■□□ 2.12
CHPF-201ENST00000243776 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
CHPF-201ENST00000243776 SOGA1O94964 1423 aa28.21■■■□□ 2.11
CHPF-201ENST00000243776 YTHDC1Q96MU7 727 aaKnown RBP28.19■■■□□ 2.1
CHPF-201ENST00000243776 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
CHPF-201ENST00000243776 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
CHPF-201ENST00000243776 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
CHPF-201ENST00000243776 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
CHPF-201ENST00000243776 EIF4G1Q04637 1599 aaKnown RBP28.08■■■□□ 2.09
CHPF-201ENST00000243776 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
CHPF-201ENST00000243776 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
CHPF-201ENST00000243776 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
CHPF-201ENST00000243776 ZNF316A6NFI3 1004 aaPredicted RBP27.98■■■□□ 2.07
CHPF-201ENST00000243776 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
CHPF-201ENST00000243776 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
CHPF-201ENST00000243776 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
CHPF-201ENST00000243776 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
CHPF-201ENST00000243776 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
CHPF-201ENST00000243776 MIER1Q8N108 512 aa27.85■■■□□ 2.05
CHPF-201ENST00000243776 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
CHPF-201ENST00000243776 GOLGA3Q08378 1498 aa27.69■■■□□ 2.02
CHPF-201ENST00000243776 APLP2Q06481 763 aa27.63■■■□□ 2.01
CHPF-201ENST00000243776 EEA1Q15075 1411 aa27.61■■■□□ 2.01
CHPF-201ENST00000243776 CLIP1P30622 1438 aa27.56■■■□□ 2
CHPF-201ENST00000243776 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
CHPF-201ENST00000243776 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
CHPF-201ENST00000243776 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
CHPF-201ENST00000243776 RAPGEF2Q9Y4G8 1499 aa27.4■■□□□ 1.98
CHPF-201ENST00000243776 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
CHPF-201ENST00000243776 ITGAEP38570 1179 aa27.27■■□□□ 1.96
CHPF-201ENST00000243776 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
CHPF-201ENST00000243776 KIF21BO75037 1637 aa27.22■■□□□ 1.95
CHPF-201ENST00000243776 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
CHPF-201ENST00000243776 DHX57Q6P158 1386 aaKnown RBP27.14■■□□□ 1.93
CHPF-201ENST00000243776 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
CHPF-201ENST00000243776 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
CHPF-201ENST00000243776 MYT1Q01538 1121 aa27.06■■□□□ 1.92
CHPF-201ENST00000243776 SUPT16HQ9Y5B9 1047 aaKnown RBP27.04■■□□□ 1.92
CHPF-201ENST00000243776 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
CHPF-201ENST00000243776 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
CHPF-201ENST00000243776 ARAP1Q96P48 1450 aa26.95■■□□□ 1.9
CHPF-201ENST00000243776 BCANQ96GW7 911 aa26.88■■□□□ 1.89
CHPF-201ENST00000243776 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
CHPF-201ENST00000243776 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
CHPF-201ENST00000243776 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
CHPF-201ENST00000243776 HIRIP3Q9BW71 556 aaPredicted RBP26.79■■□□□ 1.88
CHPF-201ENST00000243776 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
CHPF-201ENST00000243776 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
CHPF-201ENST00000243776 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
CHPF-201ENST00000243776 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
CHPF-201ENST00000243776 TSHZ2Q9NRE2 1034 aa26.74■■□□□ 1.87
CHPF-201ENST00000243776 P3H3Q8IVL6 736 aa26.72■■□□□ 1.87
CHPF-201ENST00000243776 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
CHPF-201ENST00000243776 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
CHPF-201ENST00000243776 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
CHPF-201ENST00000243776 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
CHPF-201ENST00000243776 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
CHPF-201ENST00000243776 CUX1P39880 1505 aa26.67■■□□□ 1.86
CHPF-201ENST00000243776 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
CHPF-201ENST00000243776 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
CHPF-201ENST00000243776 FKBP8Q14318 412 aa26.61■■□□□ 1.85
CHPF-201ENST00000243776 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
CHPF-201ENST00000243776 MAPKBP1O60336 1514 aa26.5■■□□□ 1.83
CHPF-201ENST00000243776 PHLDB1Q86UU1 1377 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms