RNA–Protein interactions for RNA: ENST00000431480.6

TBC1D4-204, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-204ENST00000431480 DCAF8L2P0C7V8 631 aa30.99■■■□□ 2.55
TBC1D4-204ENST00000431480 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
TBC1D4-204ENST00000431480 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
TBC1D4-204ENST00000431480 EHMT2Q96KQ7 1210 aa28.92■■■□□ 2.22
TBC1D4-204ENST00000431480 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.18
TBC1D4-204ENST00000431480 APLP2Q06481 763 aa28.37■■■□□ 2.13
TBC1D4-204ENST00000431480 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
TBC1D4-204ENST00000431480 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
TBC1D4-204ENST00000431480 FAM9AQ8IZU1 332 aaPredicted RBP27.91■■■□□ 2.06
TBC1D4-204ENST00000431480 ERICH6Q7L0X2 663 aa27.9■■■□□ 2.06
TBC1D4-204ENST00000431480 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
TBC1D4-204ENST00000431480 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
TBC1D4-204ENST00000431480 CENPBP07199 599 aaPredicted RBP27.65■■■□□ 2.02
TBC1D4-204ENST00000431480 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
TBC1D4-204ENST00000431480 ATP1B4Q9UN42 357 aaPredicted RBP27.37■■□□□ 1.97
TBC1D4-204ENST00000431480 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
TBC1D4-204ENST00000431480 NEFLP07196 543 aa27.2■■□□□ 1.95
TBC1D4-204ENST00000431480 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
TBC1D4-204ENST00000431480 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
TBC1D4-204ENST00000431480 UBTFP17480 764 aaKnown RBP27.02■■□□□ 1.92
TBC1D4-204ENST00000431480 MYT1Q01538 1121 aa26.82■■□□□ 1.88
TBC1D4-204ENST00000431480 PPARGC1BQ86YN6 1023 aaKnown RBP26.68■■□□□ 1.86
TBC1D4-204ENST00000431480 DAXXQ9UER7 740 aaPredicted RBP26.62■■□□□ 1.85
TBC1D4-204ENST00000431480 POLR3GLQ9BT43 218 aa26.5■■□□□ 1.83
TBC1D4-204ENST00000431480 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
TBC1D4-204ENST00000431480 ITGAEP38570 1179 aa26.38■■□□□ 1.81
TBC1D4-204ENST00000431480 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.81
TBC1D4-204ENST00000431480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.29■■□□□ 1.8
TBC1D4-204ENST00000431480 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
TBC1D4-204ENST00000431480 CNGB1Q14028 1251 aaPredicted RBP26.28■■□□□ 1.8
TBC1D4-204ENST00000431480 HRCP23327 699 aa26.2■■□□□ 1.78
TBC1D4-204ENST00000431480 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
TBC1D4-204ENST00000431480 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
TBC1D4-204ENST00000431480 ZNF316A6NFI3 1004 aaPredicted RBP25.97■■□□□ 1.75
TBC1D4-204ENST00000431480 CLSPNQ9HAW4 1339 aa25.95■■□□□ 1.75
TBC1D4-204ENST00000431480 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.74
TBC1D4-204ENST00000431480 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
TBC1D4-204ENST00000431480 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
TBC1D4-204ENST00000431480 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
TBC1D4-204ENST00000431480 TRIM52Q96A61 297 aa25.53■■□□□ 1.68
TBC1D4-204ENST00000431480 BCANQ96GW7 911 aa25.51■■□□□ 1.67
TBC1D4-204ENST00000431480 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
TBC1D4-204ENST00000431480 ZBTB47Q9UFB7 747 aaPredicted RBP25.4■■□□□ 1.66
TBC1D4-204ENST00000431480 ZNF326Q5BKZ1 582 aaKnown RBP25.34■■□□□ 1.65
TBC1D4-204ENST00000431480 CDK11AQ9UQ88 783 aaPredicted RBP25.31■■□□□ 1.64
TBC1D4-204ENST00000431480 ANP32CO43423 234 aa25.29■■□□□ 1.64
TBC1D4-204ENST00000431480 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
TBC1D4-204ENST00000431480 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
TBC1D4-204ENST00000431480 SLC24A1O60721 1099 aa25.23■■□□□ 1.63
TBC1D4-204ENST00000431480 CANXP27824 592 aaKnown RBP25.2■■□□□ 1.63
TBC1D4-204ENST00000431480 NEFMP07197 916 aa25.02■■□□□ 1.6
TBC1D4-204ENST00000431480 ANP32AP39687 249 aaKnown RBP24.95■■□□□ 1.58
TBC1D4-204ENST00000431480 FBLN2P98095 1184 aa24.92■■□□□ 1.58
TBC1D4-204ENST00000431480 NPM2Q86SE8 214 aaKnown RBP24.9■■□□□ 1.58
TBC1D4-204ENST00000431480 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
TBC1D4-204ENST00000431480 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
TBC1D4-204ENST00000431480 ANP32BQ92688 251 aaKnown RBP24.73■■□□□ 1.55
TBC1D4-204ENST00000431480 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
TBC1D4-204ENST00000431480 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
TBC1D4-204ENST00000431480 EIF5BO60841 1220 aaKnown RBP24.72■■□□□ 1.55
TBC1D4-204ENST00000431480 HSP90AA1P07900 732 aaKnown RBP24.69■■□□□ 1.54
TBC1D4-204ENST00000431480 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
TBC1D4-204ENST00000431480 FKBP8Q14318 412 aa24.6■■□□□ 1.53
TBC1D4-204ENST00000431480 UPF2Q9HAU5 1272 aaKnown RBP24.56■■□□□ 1.52
TBC1D4-204ENST00000431480 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
TBC1D4-204ENST00000431480 ABCC9O60706 1549 aa24.48■■□□□ 1.51
TBC1D4-204ENST00000431480 HNRNPUQ00839 825 aaKnown RBP eCLIP24.48■■□□□ 1.51
TBC1D4-204ENST00000431480 ESF1Q9H501 851 aaKnown RBP24.48■■□□□ 1.51
TBC1D4-204ENST00000431480 FAM9BQ8IZU0 186 aa24.46■■□□□ 1.51
TBC1D4-204ENST00000431480 SALL2Q9Y467 1007 aaPredicted RBP24.45■■□□□ 1.5
TBC1D4-204ENST00000431480 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
TBC1D4-204ENST00000431480 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
TBC1D4-204ENST00000431480 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.5
TBC1D4-204ENST00000431480 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
TBC1D4-204ENST00000431480 ARXQ96QS3 562 aa24.36■■□□□ 1.49
TBC1D4-204ENST00000431480 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
TBC1D4-204ENST00000431480 NBR1Q14596 966 aa24.34■■□□□ 1.49
TBC1D4-204ENST00000431480 GLIPR1L2Q4G1C9 344 aa24.33■■□□□ 1.48
TBC1D4-204ENST00000431480 CCDC136Q96JN2 1154 aa24.31■■□□□ 1.48
TBC1D4-204ENST00000431480 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.3■■□□□ 1.48
TBC1D4-204ENST00000431480 TMC1Q8TDI8 760 aa24.26■■□□□ 1.47
TBC1D4-204ENST00000431480 WDR43Q15061 677 aaKnown RBP eCLIP24.2■■□□□ 1.47
TBC1D4-204ENST00000431480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.462e-8■□□□□ 11.2
TBC1D4-204ENST00000431480 CHIC2Q9UKJ5 165 aa24.14■■□□□ 1.45
TBC1D4-204ENST00000431480 MRS2Q9HD23 443 aa24.11■■□□□ 1.45
TBC1D4-204ENST00000431480 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
TBC1D4-204ENST00000431480 IRX6P78412 446 aaPredicted RBP24.07■■□□□ 1.44
TBC1D4-204ENST00000431480 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
TBC1D4-204ENST00000431480 CDK11BP21127 795 aaKnown RBP24.07■■□□□ 1.44
TBC1D4-204ENST00000431480 MYH16Q9H6N6 1097 aa24.07■■□□□ 1.44
TBC1D4-204ENST00000431480 SCAF1Q9H7N4 1312 aaKnown RBP24.06■■□□□ 1.44
TBC1D4-204ENST00000431480 A0A0G2JS52 829 aa24.01■■□□□ 1.43
TBC1D4-204ENST00000431480 HIRIP3Q9BW71 556 aaPredicted RBP23.92■■□□□ 1.42
TBC1D4-204ENST00000431480 ZBTB7CA1YPR0 619 aa23.92■■□□□ 1.42
TBC1D4-204ENST00000431480 TSPY4P0CV99 314 aa23.91■■□□□ 1.42
TBC1D4-204ENST00000431480 TSPY10P0CW01 314 aa23.91■■□□□ 1.42
TBC1D4-204ENST00000431480 NCLP19338 710 aaKnown RBP23.91■■□□□ 1.42
TBC1D4-204ENST00000431480 PLEKHG5O94827 1062 aa23.89■■□□□ 1.42
TBC1D4-204ENST00000431480 BECN1Q14457 450 aa23.89■■□□□ 1.41
TBC1D4-204ENST00000431480 TRIM44Q96DX7 344 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms