RNA–Protein interactions for RNA: ENST00000337488.10

FIP1L1-202, Transcript of factor interacting with PAPOLA and CPSF1, humanhuman

TSL 1 (best) BASIC

Gene FIP1L1, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIP1L1-202ENST00000337488 NISCHQ9Y2I1 1504 aa41.66■■■■■ 4.26
FIP1L1-202ENST00000337488 CCDC180Q9P1Z9 1646 aa36.29■■■■□ 3.4
FIP1L1-202ENST00000337488 ZCCHC6Q5VYS8 1495 aaKnown RBP35■■■■□ 3.19
FIP1L1-202ENST00000337488 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
FIP1L1-202ENST00000337488 ABCC9O60706 1549 aa34.43■■■■□ 3.1
FIP1L1-202ENST00000337488 DCAF1Q9Y4B6 1507 aa34.36■■■■□ 3.09
FIP1L1-202ENST00000337488 SHROOM4Q9ULL8 1493 aa34.14■■■■□ 3.06
FIP1L1-202ENST00000337488 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
FIP1L1-202ENST00000337488 NACADO15069 1562 aa33.77■■■■□ 3
FIP1L1-202ENST00000337488 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.96
FIP1L1-202ENST00000337488 SCRIBQ14160 1630 aa33.5■■■□□ 2.95
FIP1L1-202ENST00000337488 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
FIP1L1-202ENST00000337488 SUPT5HO00267 1087 aaKnown RBP32.83■■■□□ 2.85
FIP1L1-202ENST00000337488 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
FIP1L1-202ENST00000337488 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
FIP1L1-202ENST00000337488 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.79
FIP1L1-202ENST00000337488 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
FIP1L1-202ENST00000337488 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
FIP1L1-202ENST00000337488 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
FIP1L1-202ENST00000337488 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
FIP1L1-202ENST00000337488 WIZO95785 1651 aa32.03■■■□□ 2.72
FIP1L1-202ENST00000337488 CHIC1Q5VXU3 224 aa31.91■■■□□ 2.7
FIP1L1-202ENST00000337488 TOP2AP11388 1531 aaKnown RBP31.6■■■□□ 2.65
FIP1L1-202ENST00000337488 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
FIP1L1-202ENST00000337488 EIF4G1Q04637 1599 aaKnown RBP31.58■■■□□ 2.65
FIP1L1-202ENST00000337488 ATAD2BQ9ULI0 1458 aa31.5■■■□□ 2.63
FIP1L1-202ENST00000337488 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
FIP1L1-202ENST00000337488 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
FIP1L1-202ENST00000337488 CCDC88BA6NC98 1476 aa31.31■■■□□ 2.6
FIP1L1-202ENST00000337488 NCAPD3P42695 1498 aa31.18■■■□□ 2.58
FIP1L1-202ENST00000337488 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
FIP1L1-202ENST00000337488 CC2D2AQ9P2K1 1620 aa31.14■■■□□ 2.58
FIP1L1-202ENST00000337488 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
FIP1L1-202ENST00000337488 LOC105371045A0A1W2PR82 267 aa30.76■■■□□ 2.52
FIP1L1-202ENST00000337488 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
FIP1L1-202ENST00000337488 CFTRP13569 1480 aa30.51■■■□□ 2.47
FIP1L1-202ENST00000337488 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
FIP1L1-202ENST00000337488 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
FIP1L1-202ENST00000337488 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
FIP1L1-202ENST00000337488 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
FIP1L1-202ENST00000337488 SYNJ1O43426 1573 aa30.38■■■□□ 2.45
FIP1L1-202ENST00000337488 PCGF6Q9BYE7 350 aa30.37■■■□□ 2.45
FIP1L1-202ENST00000337488 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
FIP1L1-202ENST00000337488 HRCP23327 699 aa30.27■■■□□ 2.44
FIP1L1-202ENST00000337488 NESP48681 1621 aa30.26■■■□□ 2.43
FIP1L1-202ENST00000337488 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
FIP1L1-202ENST00000337488 BIVM-ERCC5R4GMW8 1640 aa30.16■■■□□ 2.42
FIP1L1-202ENST00000337488 CUX1P39880 1505 aa30.15■■■□□ 2.42
FIP1L1-202ENST00000337488 LAMC3Q9Y6N6 1575 aa30.13■■■□□ 2.41
FIP1L1-202ENST00000337488 SOGA1O94964 1423 aa30.11■■■□□ 2.41
FIP1L1-202ENST00000337488 FANCD2Q9BXW9 1451 aa30.1■■■□□ 2.41
FIP1L1-202ENST00000337488 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
FIP1L1-202ENST00000337488 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
FIP1L1-202ENST00000337488 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
FIP1L1-202ENST00000337488 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
FIP1L1-202ENST00000337488 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
FIP1L1-202ENST00000337488 EEA1Q15075 1411 aa29.89■■■□□ 2.38
FIP1L1-202ENST00000337488 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
FIP1L1-202ENST00000337488 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
FIP1L1-202ENST00000337488 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
FIP1L1-202ENST00000337488 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
FIP1L1-202ENST00000337488 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
FIP1L1-202ENST00000337488 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
FIP1L1-202ENST00000337488 POLA1P09884 1462 aaPredicted RBP29.65■■■□□ 2.34
FIP1L1-202ENST00000337488 KIF27Q86VH2 1401 aa29.62■■■□□ 2.33
FIP1L1-202ENST00000337488 CUX2O14529 1486 aa29.6■■■□□ 2.33
FIP1L1-202ENST00000337488 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
FIP1L1-202ENST00000337488 KIF21BO75037 1637 aa29.6■■■□□ 2.33
FIP1L1-202ENST00000337488 GOLGA3Q08378 1498 aa29.56■■■□□ 2.32
FIP1L1-202ENST00000337488 TNIKQ9UKE5 1360 aa29.56■■■□□ 2.32
FIP1L1-202ENST00000337488 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
FIP1L1-202ENST00000337488 RAPGEF2Q9Y4G8 1499 aa29.49■■■□□ 2.31
FIP1L1-202ENST00000337488 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
FIP1L1-202ENST00000337488 CEP162Q5TB80 1403 aa29.48■■■□□ 2.31
FIP1L1-202ENST00000337488 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
FIP1L1-202ENST00000337488 UBTFP17480 764 aaKnown RBP29.46■■■□□ 2.31
FIP1L1-202ENST00000337488 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
FIP1L1-202ENST00000337488 PRXQ9BXM0 1461 aa29.45■■■□□ 2.3
FIP1L1-202ENST00000337488 PPARGC1BQ86YN6 1023 aaKnown RBP29.42■■■□□ 2.3
FIP1L1-202ENST00000337488 ZEB1P37275 1124 aaPredicted RBP29.39■■■□□ 2.3
FIP1L1-202ENST00000337488 IGF1RP08069 1367 aa29.39■■■□□ 2.3
FIP1L1-202ENST00000337488 WDR62O43379 1518 aa29.39■■■□□ 2.29
FIP1L1-202ENST00000337488 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
FIP1L1-202ENST00000337488 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
FIP1L1-202ENST00000337488 THOC2Q8NI27 1593 aaKnown RBP29.35■■■□□ 2.29
FIP1L1-202ENST00000337488 ABCA5Q8WWZ7 1642 aa29.29■■■□□ 2.28
FIP1L1-202ENST00000337488 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
FIP1L1-202ENST00000337488 CARMIL1Q5VZK9 1371 aa29.23■■■□□ 2.27
FIP1L1-202ENST00000337488 GAPVD1Q14C86 1478 aa29.21■■■□□ 2.27
FIP1L1-202ENST00000337488 CUL7Q14999 1698 aa29.16■■■□□ 2.26
FIP1L1-202ENST00000337488 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
FIP1L1-202ENST00000337488 PBRM1Q86U86 1689 aa29.11■■■□□ 2.25
FIP1L1-202ENST00000337488 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.252e-8■■■■■ 27
FIP1L1-202ENST00000337488 CLIP1P30622 1438 aa29.11■■■□□ 2.25
FIP1L1-202ENST00000337488 RANGAP1P46060 587 aaPredicted RBP29.11■■■□□ 2.25
FIP1L1-202ENST00000337488 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
FIP1L1-202ENST00000337488 EIF4G3O43432 1585 aaKnown RBP28.99■■■□□ 2.23
FIP1L1-202ENST00000337488 GRIN2BQ13224 1484 aa28.95■■■□□ 2.22
FIP1L1-202ENST00000337488 ADAMTS12P58397 1594 aa28.91■■■□□ 2.22
FIP1L1-202ENST00000337488 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms