RNA–Protein interactions for RNA: ENST00000372561.3

PPCS-203, Transcript of phosphopantothenoylcysteine synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPCS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCS-203ENST00000372561 NISCHQ9Y2I1 1504 aa48.48■■■■■ 5.35
PPCS-203ENST00000372561 CCDC180Q9P1Z9 1646 aa43.24■■■■■ 4.51
PPCS-203ENST00000372561 ABCC9O60706 1549 aa42.75■■■■■ 4.43
PPCS-203ENST00000372561 RB1CC1Q8TDY2 1594 aa40.9■■■■■ 4.14
PPCS-203ENST00000372561 NACADO15069 1562 aa40.71■■■■■ 4.11
PPCS-203ENST00000372561 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
PPCS-203ENST00000372561 DCAF8L2P0C7V8 631 aa40.3■■■■■ 4.04
PPCS-203ENST00000372561 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
PPCS-203ENST00000372561 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
PPCS-203ENST00000372561 DCAF1Q9Y4B6 1507 aa40.05■■■■■ 4
PPCS-203ENST00000372561 PABPN1Q86U42 306 aaKnown RBP eCLIP39.75■■■■□ 3.95
PPCS-203ENST00000372561 BICRAQ9NZM4 1560 aa39.75■■■■□ 3.95
PPCS-203ENST00000372561 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
PPCS-203ENST00000372561 SCRIBQ14160 1630 aa39.37■■■■□ 3.89
PPCS-203ENST00000372561 SHROOM4Q9ULL8 1493 aa39.25■■■■□ 3.87
PPCS-203ENST00000372561 EIF4G1Q04637 1599 aaKnown RBP38.72■■■■□ 3.79
PPCS-203ENST00000372561 CC2D2AQ9P2K1 1620 aa38.71■■■■□ 3.79
PPCS-203ENST00000372561 CECR2Q9BXF3 1484 aa38.48■■■■□ 3.75
PPCS-203ENST00000372561 SMARCA4P51532 1647 aa37.61■■■■□ 3.61
PPCS-203ENST00000372561 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
PPCS-203ENST00000372561 ATAD2BQ9ULI0 1458 aa37.49■■■■□ 3.59
PPCS-203ENST00000372561 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
PPCS-203ENST00000372561 SUPT5HO00267 1087 aaKnown RBP37.46■■■■□ 3.59
PPCS-203ENST00000372561 MROH2BQ7Z745 1585 aa37.46■■■■□ 3.59
PPCS-203ENST00000372561 SMARCA2P51531 1590 aa37.43■■■■□ 3.58
PPCS-203ENST00000372561 RSF1Q96T23 1441 aaPredicted RBP37.4■■■■□ 3.58
PPCS-203ENST00000372561 HMGXB3Q12766 1538 aa37.38■■■■□ 3.57
PPCS-203ENST00000372561 PEG3Q9GZU2 1588 aa37.27■■■■□ 3.56
PPCS-203ENST00000372561 BAZ1BQ9UIG0 1483 aaKnown RBP37.14■■■■□ 3.54
PPCS-203ENST00000372561 WIZO95785 1651 aa37.14■■■■□ 3.54
PPCS-203ENST00000372561 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
PPCS-203ENST00000372561 NESP48681 1621 aa36.86■■■■□ 3.49
PPCS-203ENST00000372561 CUX2O14529 1486 aa36.74■■■■□ 3.47
PPCS-203ENST00000372561 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
PPCS-203ENST00000372561 LAMC3Q9Y6N6 1575 aa36.69■■■■□ 3.46
PPCS-203ENST00000372561 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
PPCS-203ENST00000372561 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
PPCS-203ENST00000372561 CADPSQ9ULU8 1353 aa36.36■■■■□ 3.41
PPCS-203ENST00000372561 PDS5BQ9NTI5 1447 aa36.36■■■■□ 3.41
PPCS-203ENST00000372561 CCDC88BA6NC98 1476 aa36.34■■■■□ 3.41
PPCS-203ENST00000372561 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
PPCS-203ENST00000372561 MRC2Q9UBG0 1479 aa36.1■■■■□ 3.37
PPCS-203ENST00000372561 CFTRP13569 1480 aa36.09■■■■□ 3.37
PPCS-203ENST00000372561 WDR62O43379 1518 aa36.06■■■■□ 3.36
PPCS-203ENST00000372561 CEP164Q9UPV0 1460 aa36.03■■■■□ 3.36
PPCS-203ENST00000372561 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
PPCS-203ENST00000372561 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
PPCS-203ENST00000372561 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
PPCS-203ENST00000372561 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
PPCS-203ENST00000372561 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
PPCS-203ENST00000372561 TOPBP1Q92547 1522 aa35.39■■■■□ 3.26
PPCS-203ENST00000372561 DNMBPQ6XZF7 1577 aa35.32■■■■□ 3.24
PPCS-203ENST00000372561 IFT140Q96RY7 1462 aa35.28■■■■□ 3.24
PPCS-203ENST00000372561 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
PPCS-203ENST00000372561 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
PPCS-203ENST00000372561 ZNF608Q9ULD9 1512 aaPredicted RBP35.2■■■■□ 3.23
PPCS-203ENST00000372561 SYNJ1O43426 1573 aa35.14■■■■□ 3.22
PPCS-203ENST00000372561 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
PPCS-203ENST00000372561 TARBP1Q13395 1621 aaKnown RBP35.1■■■■□ 3.21
PPCS-203ENST00000372561 CUX1P39880 1505 aa35.07■■■■□ 3.2
PPCS-203ENST00000372561 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
PPCS-203ENST00000372561 TOP2BQ02880 1626 aa35.01■■■■□ 3.2
PPCS-203ENST00000372561 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
PPCS-203ENST00000372561 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
PPCS-203ENST00000372561 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
PPCS-203ENST00000372561 RAD54L2Q9Y4B4 1467 aa34.88■■■■□ 3.17
PPCS-203ENST00000372561 AQRO60306 1485 aaKnown RBP eCLIP34.87■■■■□ 3.17
PPCS-203ENST00000372561 SOGA1O94964 1423 aa34.8■■■■□ 3.16
PPCS-203ENST00000372561 CHD1O14646 1710 aa34.79■■■■□ 3.16
PPCS-203ENST00000372561 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
PPCS-203ENST00000372561 TDRD9Q8NDG6 1382 aaKnown RBP34.68■■■■□ 3.14
PPCS-203ENST00000372561 RIMBP3CA6NJZ7 1639 aa34.67■■■■□ 3.14
PPCS-203ENST00000372561 RIMBP3BA6NNM3 1639 aa34.67■■■■□ 3.14
PPCS-203ENST00000372561 RIMBP3Q9UFD9 1639 aa34.67■■■■□ 3.14
PPCS-203ENST00000372561 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
PPCS-203ENST00000372561 SNAPC4Q5SXM2 1469 aa34.59■■■■□ 3.13
PPCS-203ENST00000372561 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
PPCS-203ENST00000372561 RUSC2Q8N2Y8 1516 aa34.55■■■■□ 3.12
PPCS-203ENST00000372561 PBRM1Q86U86 1689 aa34.54■■■■□ 3.12
PPCS-203ENST00000372561 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
PPCS-203ENST00000372561 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
PPCS-203ENST00000372561 ABCA5Q8WWZ7 1642 aa34.51■■■■□ 3.12
PPCS-203ENST00000372561 ABCA10Q8WWZ4 1543 aa34.51■■■■□ 3.11
PPCS-203ENST00000372561 FBLN2P98095 1184 aa34.45■■■■□ 3.11
PPCS-203ENST00000372561 GAPVD1Q14C86 1478 aa34.43■■■■□ 3.1
PPCS-203ENST00000372561 EEA1Q15075 1411 aa34.42■■■■□ 3.1
PPCS-203ENST00000372561 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
PPCS-203ENST00000372561 KIF27Q86VH2 1401 aa34.38■■■■□ 3.09
PPCS-203ENST00000372561 CLASP1Q7Z460 1538 aa34.38■■■■□ 3.09
PPCS-203ENST00000372561 CSRNP3Q8WYN3 585 aa34.3■■■■□ 3.08
PPCS-203ENST00000372561 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
PPCS-203ENST00000372561 ARAP1Q96P48 1450 aa34.25■■■■□ 3.07
PPCS-203ENST00000372561 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
PPCS-203ENST00000372561 LOC105371045A0A1W2PR82 267 aa34.19■■■■□ 3.06
PPCS-203ENST00000372561 EHMT2Q96KQ7 1210 aa34.18■■■■□ 3.06
PPCS-203ENST00000372561 IGF1RP08069 1367 aa34.12■■■■□ 3.05
PPCS-203ENST00000372561 GRIN2AQ12879 1464 aa34.11■■■■□ 3.05
PPCS-203ENST00000372561 CYB5RLQ6IPT4 315 aa34.11■■■■□ 3.05
PPCS-203ENST00000372561 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
PPCS-203ENST00000372561 KIF21BO75037 1637 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms