RNA–Protein interactions for RNA: ENST00000395010.5

LRRC20-205, Transcript of leucine rich repeat containing 20, humanhuman

TSL 3 BASIC

Gene LRRC20, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-205ENST00000395010 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
LRRC20-205ENST00000395010 SHROOM4Q9ULL8 1493 aa33.27■■■□□ 2.92
LRRC20-205ENST00000395010 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
LRRC20-205ENST00000395010 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
LRRC20-205ENST00000395010 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
LRRC20-205ENST00000395010 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
LRRC20-205ENST00000395010 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
LRRC20-205ENST00000395010 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
LRRC20-205ENST00000395010 DCAF1Q9Y4B6 1507 aa31.17■■■□□ 2.58
LRRC20-205ENST00000395010 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.55
LRRC20-205ENST00000395010 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
LRRC20-205ENST00000395010 HRCP23327 699 aa30.85■■■□□ 2.53
LRRC20-205ENST00000395010 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
LRRC20-205ENST00000395010 ABCC9O60706 1549 aa30.56■■■□□ 2.48
LRRC20-205ENST00000395010 PPARGC1BQ86YN6 1023 aaKnown RBP30.48■■■□□ 2.47
LRRC20-205ENST00000395010 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
LRRC20-205ENST00000395010 FAM9AQ8IZU1 332 aaPredicted RBP30.27■■■□□ 2.44
LRRC20-205ENST00000395010 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
LRRC20-205ENST00000395010 EHMT2Q96KQ7 1210 aa30.21■■■□□ 2.43
LRRC20-205ENST00000395010 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.43
LRRC20-205ENST00000395010 TRIM26Q12899 539 aaPredicted RBP30.09■■■□□ 2.41
LRRC20-205ENST00000395010 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
LRRC20-205ENST00000395010 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
LRRC20-205ENST00000395010 NACADO15069 1562 aa29.87■■■□□ 2.37
LRRC20-205ENST00000395010 WIZO95785 1651 aa29.73■■■□□ 2.35
LRRC20-205ENST00000395010 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
LRRC20-205ENST00000395010 ZEB1P37275 1124 aaPredicted RBP29.34■■■□□ 2.29
LRRC20-205ENST00000395010 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
LRRC20-205ENST00000395010 ABCC8Q09428 1581 aa29.23■■■□□ 2.27
LRRC20-205ENST00000395010 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
LRRC20-205ENST00000395010 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
LRRC20-205ENST00000395010 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
LRRC20-205ENST00000395010 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
LRRC20-205ENST00000395010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
LRRC20-205ENST00000395010 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
LRRC20-205ENST00000395010 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
LRRC20-205ENST00000395010 SOGA1O94964 1423 aa29.01■■■□□ 2.23
LRRC20-205ENST00000395010 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
LRRC20-205ENST00000395010 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
LRRC20-205ENST00000395010 RUSC2Q8N2Y8 1516 aa28.88■■■□□ 2.21
LRRC20-205ENST00000395010 UBTFP17480 764 aaKnown RBP28.87■■■□□ 2.21
LRRC20-205ENST00000395010 CEP162Q5TB80 1403 aa28.87■■■□□ 2.21
LRRC20-205ENST00000395010 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
LRRC20-205ENST00000395010 TNIKQ9UKE5 1360 aa28.7■■■□□ 2.19
LRRC20-205ENST00000395010 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
LRRC20-205ENST00000395010 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.182e-8■■■■■ 75.2
LRRC20-205ENST00000395010 SCAF1Q9H7N4 1312 aaKnown RBP28.61■■■□□ 2.17
LRRC20-205ENST00000395010 EEA1Q15075 1411 aa28.56■■■□□ 2.16
LRRC20-205ENST00000395010 RANGAP1P46060 587 aaPredicted RBP28.53■■■□□ 2.16
LRRC20-205ENST00000395010 GOLGA3Q08378 1498 aa28.52■■■□□ 2.16
LRRC20-205ENST00000395010 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
LRRC20-205ENST00000395010 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
LRRC20-205ENST00000395010 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
LRRC20-205ENST00000395010 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
LRRC20-205ENST00000395010 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
LRRC20-205ENST00000395010 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
LRRC20-205ENST00000395010 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
LRRC20-205ENST00000395010 CLIP1P30622 1438 aa28.3■■■□□ 2.12
LRRC20-205ENST00000395010 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
LRRC20-205ENST00000395010 RAPGEF2Q9Y4G8 1499 aa28.25■■■□□ 2.11
LRRC20-205ENST00000395010 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.11
LRRC20-205ENST00000395010 KIF21BO75037 1637 aa28.17■■■□□ 2.1
LRRC20-205ENST00000395010 APLP2Q06481 763 aa28.16■■■□□ 2.1
LRRC20-205ENST00000395010 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
LRRC20-205ENST00000395010 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
LRRC20-205ENST00000395010 GTF3C3Q9Y5Q9 886 aa28■■■□□ 2.07
LRRC20-205ENST00000395010 YTHDC1Q96MU7 727 aaKnown RBP27.98■■■□□ 2.07
LRRC20-205ENST00000395010 CENPBP07199 599 aaPredicted RBP27.98■■■□□ 2.07
LRRC20-205ENST00000395010 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
LRRC20-205ENST00000395010 KANK4Q5T7N3 995 aaPredicted RBP27.86■■■□□ 2.05
LRRC20-205ENST00000395010 MIER1Q8N108 512 aa27.84■■■□□ 2.05
LRRC20-205ENST00000395010 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
LRRC20-205ENST00000395010 PELP1Q8IZL8 1130 aaKnown RBP27.79■■■□□ 2.04
LRRC20-205ENST00000395010 CUX1P39880 1505 aa27.79■■■□□ 2.04
LRRC20-205ENST00000395010 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
LRRC20-205ENST00000395010 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
LRRC20-205ENST00000395010 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
LRRC20-205ENST00000395010 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
LRRC20-205ENST00000395010 ERICH3Q5RHP9 1530 aa27.69■■■□□ 2.02
LRRC20-205ENST00000395010 ITGAEP38570 1179 aa27.67■■■□□ 2.02
LRRC20-205ENST00000395010 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
LRRC20-205ENST00000395010 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
LRRC20-205ENST00000395010 CFTRP13569 1480 aa27.6■■■□□ 2.01
LRRC20-205ENST00000395010 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
LRRC20-205ENST00000395010 CUX2O14529 1486 aa27.5■■□□□ 1.99
LRRC20-205ENST00000395010 IGF1RP08069 1367 aa27.43■■□□□ 1.98
LRRC20-205ENST00000395010 CCNB3Q8WWL7 1395 aa27.43■■□□□ 1.98
LRRC20-205ENST00000395010 RRBP1Q9P2E9 1410 aaKnown RBP27.43■■□□□ 1.98
LRRC20-205ENST00000395010 P3H3Q8IVL6 736 aa27.41■■□□□ 1.98
LRRC20-205ENST00000395010 CLSPNQ9HAW4 1339 aa27.38■■□□□ 1.97
LRRC20-205ENST00000395010 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
LRRC20-205ENST00000395010 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
LRRC20-205ENST00000395010 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
LRRC20-205ENST00000395010 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
LRRC20-205ENST00000395010 RAB3GAP2Q9H2M9 1393 aa27.25■■□□□ 1.95
LRRC20-205ENST00000395010 FAM50AQ14320 339 aaKnown RBP27.25■■□□□ 1.95
LRRC20-205ENST00000395010 PHLDB1Q86UU1 1377 aa27.18■■□□□ 1.94
LRRC20-205ENST00000395010 TIAM1Q13009 1591 aa27.17■■□□□ 1.94
LRRC20-205ENST00000395010 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
LRRC20-205ENST00000395010 SIN3AQ96ST3 1273 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms