RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 NISCHQ9Y2I1 1504 aa50.98■■■■■ 5.75
RAB3A-201ENST00000222256 CCDC180Q9P1Z9 1646 aa45.01■■■■■ 4.8
RAB3A-201ENST00000222256 ABCC9O60706 1549 aa43.32■■■■■ 4.53
RAB3A-201ENST00000222256 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
RAB3A-201ENST00000222256 DCAF8L2P0C7V8 631 aa42.3■■■■■ 4.36
RAB3A-201ENST00000222256 DCAF1Q9Y4B6 1507 aa42.23■■■■■ 4.35
RAB3A-201ENST00000222256 NACADO15069 1562 aa42.15■■■■■ 4.34
RAB3A-201ENST00000222256 MYO15BQ96JP2 1530 aa42.14■■■■■ 4.34
RAB3A-201ENST00000222256 RB1CC1Q8TDY2 1594 aa42.02■■■■■ 4.32
RAB3A-201ENST00000222256 SCRIBQ14160 1630 aa41.11■■■■■ 4.17
RAB3A-201ENST00000222256 UNC13AQ9UPW8 1703 aa41.08■■■■■ 4.17
RAB3A-201ENST00000222256 BICRAQ9NZM4 1560 aa40.71■■■■■ 4.11
RAB3A-201ENST00000222256 SHROOM4Q9ULL8 1493 aa40.69■■■■■ 4.1
RAB3A-201ENST00000222256 PABPN1Q86U42 306 aaKnown RBP eCLIP40.61■■■■■ 4.09
RAB3A-201ENST00000222256 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
RAB3A-201ENST00000222256 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
RAB3A-201ENST00000222256 BAZ1AQ9NRL2 1556 aaPredicted RBP39.47■■■■□ 3.91
RAB3A-201ENST00000222256 SMARCA4P51532 1647 aa39.41■■■■□ 3.9
RAB3A-201ENST00000222256 MROH2BQ7Z745 1585 aa39.3■■■■□ 3.88
RAB3A-201ENST00000222256 CC2D2AQ9P2K1 1620 aa39.24■■■■□ 3.87
RAB3A-201ENST00000222256 RSF1Q96T23 1441 aaPredicted RBP39.12■■■■□ 3.85
RAB3A-201ENST00000222256 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
RAB3A-201ENST00000222256 PEG3Q9GZU2 1588 aa39.02■■■■□ 3.84
RAB3A-201ENST00000222256 SMARCA2P51531 1590 aa39■■■■□ 3.83
RAB3A-201ENST00000222256 ATAD2BQ9ULI0 1458 aa39■■■■□ 3.83
RAB3A-201ENST00000222256 WIZO95785 1651 aa38.91■■■■□ 3.82
RAB3A-201ENST00000222256 NCAPD3P42695 1498 aa38.88■■■■□ 3.81
RAB3A-201ENST00000222256 HMGXB3Q12766 1538 aa38.75■■■■□ 3.79
RAB3A-201ENST00000222256 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
RAB3A-201ENST00000222256 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
RAB3A-201ENST00000222256 TOP2AP11388 1531 aaKnown RBP38.54■■■■□ 3.76
RAB3A-201ENST00000222256 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
RAB3A-201ENST00000222256 CADPSQ9ULU8 1353 aa37.79■■■■□ 3.64
RAB3A-201ENST00000222256 LAMC3Q9Y6N6 1575 aa37.75■■■■□ 3.63
RAB3A-201ENST00000222256 CFTRP13569 1480 aa37.72■■■■□ 3.63
RAB3A-201ENST00000222256 NESP48681 1621 aa37.71■■■■□ 3.63
RAB3A-201ENST00000222256 PRDM2Q13029 1718 aa37.51■■■■□ 3.6
RAB3A-201ENST00000222256 PDS5BQ9NTI5 1447 aa37.46■■■■□ 3.59
RAB3A-201ENST00000222256 FANCD2Q9BXW9 1451 aa37.35■■■■□ 3.57
RAB3A-201ENST00000222256 ERCC6Q03468 1493 aa37.3■■■■□ 3.56
RAB3A-201ENST00000222256 KIF21AQ7Z4S6 1674 aa37.29■■■■□ 3.56
RAB3A-201ENST00000222256 CEP164Q9UPV0 1460 aa37.23■■■■□ 3.55
RAB3A-201ENST00000222256 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
RAB3A-201ENST00000222256 THOC2Q8NI27 1593 aaKnown RBP36.99■■■■□ 3.51
RAB3A-201ENST00000222256 URB2Q14146 1524 aaKnown RBP36.92■■■■□ 3.5
RAB3A-201ENST00000222256 ABCC8Q09428 1581 aa36.91■■■■□ 3.5
RAB3A-201ENST00000222256 WDR62O43379 1518 aa36.88■■■■□ 3.49
RAB3A-201ENST00000222256 DNMBPQ6XZF7 1577 aa36.86■■■■□ 3.49
RAB3A-201ENST00000222256 WRNQ14191 1432 aaPredicted RBP eCLIP36.86■■■■□ 3.49
RAB3A-201ENST00000222256 TOPBP1Q92547 1522 aa36.83■■■■□ 3.49
RAB3A-201ENST00000222256 CUX1P39880 1505 aa36.82■■■■□ 3.49
RAB3A-201ENST00000222256 SYNJ1O43426 1573 aa36.72■■■■□ 3.47
RAB3A-201ENST00000222256 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
RAB3A-201ENST00000222256 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
RAB3A-201ENST00000222256 CUX2O14529 1486 aa36.64■■■■□ 3.46
RAB3A-201ENST00000222256 FGD5Q6ZNL6 1462 aa36.58■■■■□ 3.45
RAB3A-201ENST00000222256 POLA1P09884 1462 aaPredicted RBP36.57■■■■□ 3.44
RAB3A-201ENST00000222256 CHIC1Q5VXU3 224 aa36.52■■■■□ 3.44
RAB3A-201ENST00000222256 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
RAB3A-201ENST00000222256 SOGA1O94964 1423 aa36.44■■■■□ 3.42
RAB3A-201ENST00000222256 IFT140Q96RY7 1462 aa36.42■■■■□ 3.42
RAB3A-201ENST00000222256 RAD54L2Q9Y4B4 1467 aa36.39■■■■□ 3.42
RAB3A-201ENST00000222256 TARBP1Q13395 1621 aaKnown RBP36.38■■■■□ 3.41
RAB3A-201ENST00000222256 ABCA10Q8WWZ4 1543 aa36.27■■■■□ 3.4
RAB3A-201ENST00000222256 WDR97A6NE52 1622 aa36.25■■■■□ 3.39
RAB3A-201ENST00000222256 ZNF608Q9ULD9 1512 aaPredicted RBP36.19■■■■□ 3.38
RAB3A-201ENST00000222256 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.38
RAB3A-201ENST00000222256 EIF4G3O43432 1585 aaKnown RBP36.09■■■■□ 3.37
RAB3A-201ENST00000222256 AQRO60306 1485 aaKnown RBP eCLIP36.08■■■■□ 3.37
RAB3A-201ENST00000222256 ABCA5Q8WWZ7 1642 aa36.07■■■■□ 3.36
RAB3A-201ENST00000222256 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
RAB3A-201ENST00000222256 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
RAB3A-201ENST00000222256 GRIN2BQ13224 1484 aa35.93■■■■□ 3.34
RAB3A-201ENST00000222256 RUSC2Q8N2Y8 1516 aa35.92■■■■□ 3.34
RAB3A-201ENST00000222256 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
RAB3A-201ENST00000222256 ERICH3Q5RHP9 1530 aa35.86■■■■□ 3.33
RAB3A-201ENST00000222256 EEA1Q15075 1411 aa35.85■■■■□ 3.33
RAB3A-201ENST00000222256 IGF1RP08069 1367 aa35.8■■■■□ 3.32
RAB3A-201ENST00000222256 SNAPC4Q5SXM2 1469 aa35.77■■■■□ 3.32
RAB3A-201ENST00000222256 MAGI1Q96QZ7 1491 aaPredicted RBP35.76■■■■□ 3.32
RAB3A-201ENST00000222256 FAM9AQ8IZU1 332 aaPredicted RBP35.71■■■■□ 3.31
RAB3A-201ENST00000222256 CSRNP3Q8WYN3 585 aa35.68■■■■□ 3.3
RAB3A-201ENST00000222256 CUL7Q14999 1698 aa35.68■■■■□ 3.3
RAB3A-201ENST00000222256 ADAMTS12P58397 1594 aa35.66■■■■□ 3.3
RAB3A-201ENST00000222256 FHAD1B1AJZ9 1412 aa35.64■■■■□ 3.3
RAB3A-201ENST00000222256 CARMIL1Q5VZK9 1371 aa35.61■■■■□ 3.29
RAB3A-201ENST00000222256 SYNJ2O15056 1496 aa35.61■■■■□ 3.29
RAB3A-201ENST00000222256 PRXQ9BXM0 1461 aa35.54■■■■□ 3.28
RAB3A-201ENST00000222256 CHMP7Q8WUX9 453 aaPredicted RBP35.53■■■■□ 3.28
RAB3A-201ENST00000222256 FBLN2P98095 1184 aa35.52■■■■□ 3.28
RAB3A-201ENST00000222256 CHD1O14646 1710 aa35.5■■■■□ 3.27
RAB3A-201ENST00000222256 RAPGEF2Q9Y4G8 1499 aa35.48■■■■□ 3.27
RAB3A-201ENST00000222256 GRIN2AQ12879 1464 aa35.46■■■■□ 3.27
RAB3A-201ENST00000222256 KIF21BO75037 1637 aa35.41■■■■□ 3.26
RAB3A-201ENST00000222256 NUP160Q12769 1436 aa35.27■■■■□ 3.24
RAB3A-201ENST00000222256 OSCARQ8IYS5 282 aa35.27■■■■□ 3.24
RAB3A-201ENST00000222256 GOLGA3Q08378 1498 aa35.26■■■■□ 3.24
RAB3A-201ENST00000222256 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
RAB3A-201ENST00000222256 EHMT2Q96KQ7 1210 aa35.16■■■■□ 3.22
RAB3A-201ENST00000222256 KIAA0586Q9BVV6 1533 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms