Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.16■□□□□ 0.022e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.022e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-228ENST00000491477 457 ntTSL 515.16■□□□□ 0.022e-7■■□□□ 12.7
PRPF8Q6P2Q9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-12■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC9.15□□□□□ -0.952e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-227ENST00000489124 450 ntTSL 36.87□□□□□ -1.312e-7■■□□□ 12.7
PRPF8Q6P2Q9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.374e-8■■□□□ 12.7
PRPF8Q6P2Q9 TM4SF5-202ENST00000576530 932 ntTSL 1 (best)15.83■□□□□ 0.124e-8■■□□□ 12.7
PRPF8Q6P2Q9 TFRC-204ENST00000421258 524 ntTSL 311.7□□□□□ -0.547e-15■■□□□ 12.7
PRPF8Q6P2Q9 RPL23A-208ENST00000580755 412 ntTSL 214.37□□□□□ -0.111e-14■■□□□ 12.7
PRPF8Q6P2Q9 ZNF589-206ENST00000454212 663 ntTSL 26.66□□□□□ -1.347e-12■■□□□ 12.7
PRPF8Q6P2Q9 SNORD4B-201ENST00000459083 72 ntBASIC-2.23□□□□□ -2.771e-14■■□□□ 12.7
PRPF8Q6P2Q9 ACSF3-214ENST00000543676 940 ntTSL 214.13□□□□□ -0.151e-6■■□□□ 12.7
PRPF8Q6P2Q9 ACSF3-216ENST00000562204 581 ntTSL 311.3□□□□□ -0.61e-6■■□□□ 12.7
PRPF8Q6P2Q9 RPS24-207ENST00000466129 661 ntTSL 27.44□□□□□ -1.225e-17■■□□□ 12.7
PRPF8Q6P2Q9 LTBR-214ENST00000545445 379 ntTSL 210□□□□□ -0.815e-22■■□□□ 12.7
PRPF8Q6P2Q9 GAS8-211ENST00000565000 485 ntTSL 212.22□□□□□ -0.451e-13■■□□□ 12.7
PRPF8Q6P2Q9 GAS8-209ENST00000564802 470 ntTSL 38.44□□□□□ -1.061e-13■■□□□ 12.7
PRPF8Q6P2Q9 TNFRSF10B-206ENST00000520109 674 ntTSL 216.34■□□□□ 0.216e-7■■□□□ 12.7
PRPF8Q6P2Q9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.152e-6■■□□□ 12.7
PRPF8Q6P2Q9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.032e-6■■□□□ 12.7
PRPF8Q6P2Q9 FBXL19-203ENST00000427128 3312 ntTSL 1 (best)12.36□□□□□ -0.432e-6■■□□□ 12.7
PRPF8Q6P2Q9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.442e-6■■□□□ 12.7
PRPF8Q6P2Q9 FRRS1-204ENST00000492943 440 ntTSL 53.52□□□□□ -1.854e-10■■□□□ 12.7
PRPF8Q6P2Q9 FRRS1-203ENST00000489209 216 ntTSL 52.99□□□□□ -1.934e-10■■□□□ 12.7
PRPF8Q6P2Q9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.737e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-203ENST00000562209 624 ntTSL 516.86■□□□□ 0.297e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.117e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-204ENST00000563526 1052 ntTSL 213.38□□□□□ -0.277e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.73□□□□□ -0.377e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-206ENST00000566229 405 ntTSL 311.77□□□□□ -0.527e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-207ENST00000566534 1006 ntTSL 511.77□□□□□ -0.527e-8■■□□□ 12.6
PRPF8Q6P2Q9 CYBA-209ENST00000568278 439 ntTSL 511.12□□□□□ -0.637e-8■■□□□ 12.6
PRPF8Q6P2Q9 ACAP3-210ENST00000478065 2393 ntTSL 314.49□□□□□ -0.095e-9■■□□□ 12.6
PRPF8Q6P2Q9 TKFC-218ENST00000533853 460 ntTSL 310.71□□□□□ -0.694e-8■■□□□ 12.6
PRPF8Q6P2Q9 CPTP-202ENST00000464957 1101 ntTSL 226.2■■□□□ 1.799e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.423e-8■■□□□ 12.6
PRPF8Q6P2Q9 MZT2A-204ENST00000445782 980 ntTSL 223.08■■□□□ 1.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.88■■□□□ 1.251e-10■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.189e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.35■■□□□ 1.173e-18■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-207ENST00000484050 551 ntTSL 421.37■■□□□ 1.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-205ENST00000457571 975 ntTSL 521.17■□□□□ 0.989e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.933e-8■■□□□ 12.6
PRPF8Q6P2Q9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.939e-6■■□□□ 12.6
PRPF8Q6P2Q9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.79■□□□□ 0.929e-6■■□□□ 12.6
PRPF8Q6P2Q9 RHBDD3-206ENST00000493894 999 ntTSL 220.36■□□□□ 0.851e-7■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-208ENST00000472446 473 ntTSL 320.34■□□□□ 0.859e-6■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-207ENST00000472453 1764 ntTSL 1 (best)20.33■□□□□ 0.856e-6■■□□□ 12.6
PRPF8Q6P2Q9 RHBDD3-205ENST00000488106 640 ntTSL 520.31■□□□□ 0.841e-7■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-215ENST00000480641 543 ntTSL 420.29■□□□□ 0.848e-12■■□□□ 12.6
PRPF8Q6P2Q9 C19orf12-203ENST00000392275 1188 ntTSL 220.28■□□□□ 0.849e-6■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-218ENST00000523328 343 ntTSL 1 (best)20.16■□□□□ 0.821e-10■■□□□ 12.6
PRPF8Q6P2Q9 SIRT1-205ENST00000473922 576 ntTSL 420.1■□□□□ 0.819e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.08■□□□□ 0.89e-6■■□□□ 12.6
PRPF8Q6P2Q9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.799e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-207ENST00000461404 591 ntTSL 520.01■□□□□ 0.799e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.75■□□□□ 0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.73■□□□□ 0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-212ENST00000580147 708 ntTSL 319.68■□□□□ 0.749e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-207ENST00000485869 583 ntTSL 219.48■□□□□ 0.713e-8■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-205ENST00000450512 559 ntTSL 419.47■□□□□ 0.719e-6■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-204ENST00000460900 1443 ntTSL 219.39■□□□□ 0.699e-6■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-209ENST00000495828 972 ntTSL 319.31■□□□□ 0.689e-6■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.689e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-208ENST00000493256 880 ntTSL 319.19■□□□□ 0.669e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-214ENST00000518607 473 ntTSL 419.12■□□□□ 0.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.01■□□□□ 0.639e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-204ENST00000395873 698 ntTSL 318.96■□□□□ 0.639e-6■■□□□ 12.6
PRPF8Q6P2Q9 RHBDD3-204ENST00000414672 900 ntTSL 518.92■□□□□ 0.621e-7■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-203ENST00000452396 764 ntTSL 318.63■□□□□ 0.579e-6■■□□□ 12.6
PRPF8Q6P2Q9 AC091060.1-201ENST00000623524 1766 ntBASIC18.51■□□□□ 0.559e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.533e-18■■□□□ 12.6
PRPF8Q6P2Q9 RHBDD3-202ENST00000406335 755 ntTSL 218.25■□□□□ 0.511e-7■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.519e-6■■□□□ 12.6
PRPF8Q6P2Q9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.53e-8■■□□□ 12.6
PRPF8Q6P2Q9 APBB2-206ENST00000503503 544 ntTSL 518.04■□□□□ 0.489e-6■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-207ENST00000473925 804 ntTSL 217.82■□□□□ 0.445e-8■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-206ENST00000496700 2241 ntTSL 217.61■□□□□ 0.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 PAF1-207ENST00000598127 558 ntTSL 217.61■□□□□ 0.418e-12■■□□□ 12.6
PRPF8Q6P2Q9 HTD2-207ENST00000498618 557 ntTSL 417.59■□□□□ 0.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.52■□□□□ 0.41e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-203ENST00000451537 1070 ntTSL 217.49■□□□□ 0.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.383e-18■■□□□ 12.6
PRPF8Q6P2Q9 PTPN18-211ENST00000481492 1394 ntTSL 217.42■□□□□ 0.389e-6■■□□□ 12.6
PRPF8Q6P2Q9 APBB2-215ENST00000508676 604 ntTSL 217.27■□□□□ 0.359e-6■■□□□ 12.6
PRPF8Q6P2Q9 HMGCS1-206ENST00000511774 500 ntTSL 417.27■□□□□ 0.353e-8■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-208ENST00000483307 688 ntTSL 217.26■□□□□ 0.355e-8■■□□□ 12.6
PRPF8Q6P2Q9 PTP4A2-215ENST00000533408 376 ntTSL 317.24■□□□□ 0.358e-12■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.346e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.331e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-210ENST00000550215 534 ntTSL 416.99■□□□□ 0.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-210ENST00000600084 1057 ntTSL 1 (best)16.93■□□□□ 0.39e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.299e-6■■□□□ 12.6
PRPF8Q6P2Q9 APBB2-205ENST00000503264 493 ntTSL 416.83■□□□□ 0.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 APBB2-217ENST00000509446 907 ntTSL 216.83■□□□□ 0.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.285e-8■■□□□ 12.6
PRPF8Q6P2Q9 TRIM45-204ENST00000485032 1109 ntTSL 216.78■□□□□ 0.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 APBB2-216ENST00000508707 639 ntTSL 216.58■□□□□ 0.249e-6■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 516.7 ms