RNA–Protein interactions for RNA: ENST00000450512.1

LYSMD4-205, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-205ENST00000450512 NISCHQ9Y2I1 1504 aa56.43■■■■■ 6.62
LYSMD4-205ENST00000450512 CCDC180Q9P1Z9 1646 aa50.46■■■■■ 5.67
LYSMD4-205ENST00000450512 ABCC9O60706 1549 aa50.16■■■■■ 5.62
LYSMD4-205ENST00000450512 RB1CC1Q8TDY2 1594 aa47.89■■■■■ 5.26
LYSMD4-205ENST00000450512 NACADO15069 1562 aa47.65■■■■■ 5.22
LYSMD4-205ENST00000450512 DCAF8L2P0C7V8 631 aa47.56■■■■■ 5.2
LYSMD4-205ENST00000450512 MYO15BQ96JP2 1530 aa47.1■■■■■ 5.13
LYSMD4-205ENST00000450512 ZCCHC6Q5VYS8 1495 aaKnown RBP46.83■■■■■ 5.09
LYSMD4-205ENST00000450512 PABPN1Q86U42 306 aaKnown RBP eCLIP46.79■■■■■ 5.08
LYSMD4-205ENST00000450512 DNAJC5BQ9UF47 199 aa46.75■■■■■ 5.07
LYSMD4-205ENST00000450512 UNC13AQ9UPW8 1703 aa46.75■■■■■ 5.07
LYSMD4-205ENST00000450512 DCAF1Q9Y4B6 1507 aa46.63■■■■■ 5.05
LYSMD4-205ENST00000450512 BICRAQ9NZM4 1560 aa46.46■■■■■ 5.03
LYSMD4-205ENST00000450512 SCRIBQ14160 1630 aa46.03■■■■■ 4.96
LYSMD4-205ENST00000450512 SHROOM4Q9ULL8 1493 aa45.88■■■■■ 4.94
LYSMD4-205ENST00000450512 CC2D2AQ9P2K1 1620 aa45.31■■■■■ 4.84
LYSMD4-205ENST00000450512 EIF4G1Q04637 1599 aaKnown RBP45.31■■■■■ 4.84
LYSMD4-205ENST00000450512 CECR2Q9BXF3 1484 aa45.15■■■■■ 4.82
LYSMD4-205ENST00000450512 NCAPD3P42695 1498 aa43.99■■■■■ 4.63
LYSMD4-205ENST00000450512 SMARCA4P51532 1647 aa43.94■■■■■ 4.62
LYSMD4-205ENST00000450512 ATAD2BQ9ULI0 1458 aa43.91■■■■■ 4.62
LYSMD4-205ENST00000450512 SMARCA2P51531 1590 aa43.8■■■■■ 4.6
LYSMD4-205ENST00000450512 BAZ1AQ9NRL2 1556 aaPredicted RBP43.79■■■■■ 4.6
LYSMD4-205ENST00000450512 HMGXB3Q12766 1538 aa43.68■■■■■ 4.58
LYSMD4-205ENST00000450512 BAZ1BQ9UIG0 1483 aaKnown RBP43.51■■■■■ 4.56
LYSMD4-205ENST00000450512 PEG3Q9GZU2 1588 aa43.5■■■■■ 4.55
LYSMD4-205ENST00000450512 MROH2BQ7Z745 1585 aa43.49■■■■■ 4.55
LYSMD4-205ENST00000450512 ERCC6Q03468 1493 aa43.3■■■■■ 4.52
LYSMD4-205ENST00000450512 NESP48681 1621 aa43.19■■■■■ 4.5
LYSMD4-205ENST00000450512 CUX2O14529 1486 aa43.07■■■■■ 4.49
LYSMD4-205ENST00000450512 WIZO95785 1651 aa42.98■■■■■ 4.47
LYSMD4-205ENST00000450512 LAMC3Q9Y6N6 1575 aa42.94■■■■■ 4.46
LYSMD4-205ENST00000450512 RSF1Q96T23 1441 aaPredicted RBP42.73■■■■■ 4.43
LYSMD4-205ENST00000450512 PDS5BQ9NTI5 1447 aa42.71■■■■■ 4.43
LYSMD4-205ENST00000450512 CADPSQ9ULU8 1353 aa42.69■■■■■ 4.42
LYSMD4-205ENST00000450512 DNAJC5Q9H3Z4 198 aa42.68■■■■■ 4.42
LYSMD4-205ENST00000450512 THOC2Q8NI27 1593 aaKnown RBP42.65■■■■■ 4.42
LYSMD4-205ENST00000450512 KIF21AQ7Z4S6 1674 aa42.61■■■■■ 4.41
LYSMD4-205ENST00000450512 TOP2AP11388 1531 aaKnown RBP42.46■■■■■ 4.39
LYSMD4-205ENST00000450512 MRC2Q9UBG0 1479 aa42.3■■■■■ 4.36
LYSMD4-205ENST00000450512 CFTRP13569 1480 aa42.26■■■■■ 4.36
LYSMD4-205ENST00000450512 CEP164Q9UPV0 1460 aa42.2■■■■■ 4.35
LYSMD4-205ENST00000450512 FANCD2Q9BXW9 1451 aa42.19■■■■■ 4.34
LYSMD4-205ENST00000450512 WDR62O43379 1518 aa42.16■■■■■ 4.34
LYSMD4-205ENST00000450512 CCDC88BA6NC98 1476 aa42■■■■■ 4.31
LYSMD4-205ENST00000450512 URB2Q14146 1524 aaKnown RBP41.81■■■■■ 4.28
LYSMD4-205ENST00000450512 PRDM2Q13029 1718 aa41.81■■■■■ 4.28
LYSMD4-205ENST00000450512 TOPBP1Q92547 1522 aa41.43■■■■■ 4.22
LYSMD4-205ENST00000450512 ABCC8Q09428 1581 aa41.37■■■■■ 4.21
LYSMD4-205ENST00000450512 IFT140Q96RY7 1462 aa41.34■■■■■ 4.21
LYSMD4-205ENST00000450512 DNMBPQ6XZF7 1577 aa41.3■■■■■ 4.2
LYSMD4-205ENST00000450512 ZNF608Q9ULD9 1512 aaPredicted RBP41.24■■■■■ 4.19
LYSMD4-205ENST00000450512 OSCARQ8IYS5 282 aa41.22■■■■■ 4.19
LYSMD4-205ENST00000450512 SUPT5HO00267 1087 aaKnown RBP41.15■■■■■ 4.18
LYSMD4-205ENST00000450512 POLA1P09884 1462 aaPredicted RBP41.02■■■■■ 4.16
LYSMD4-205ENST00000450512 TARBP1Q13395 1621 aaKnown RBP41.02■■■■■ 4.16
LYSMD4-205ENST00000450512 EIF4G3O43432 1585 aaKnown RBP41.02■■■■■ 4.16
LYSMD4-205ENST00000450512 TRIM41Q8WV44 630 aa40.98■■■■■ 4.15
LYSMD4-205ENST00000450512 AQRO60306 1485 aaKnown RBP eCLIP40.93■■■■■ 4.14
LYSMD4-205ENST00000450512 SOGA1O94964 1423 aa40.88■■■■■ 4.13
LYSMD4-205ENST00000450512 RAD54L2Q9Y4B4 1467 aa40.88■■■■■ 4.13
LYSMD4-205ENST00000450512 CUX1P39880 1505 aa40.83■■■■■ 4.13
LYSMD4-205ENST00000450512 FGD5Q6ZNL6 1462 aa40.83■■■■■ 4.13
LYSMD4-205ENST00000450512 TDRD9Q8NDG6 1382 aaKnown RBP40.75■■■■■ 4.11
LYSMD4-205ENST00000450512 CHD1O14646 1710 aa40.63■■■■■ 4.09
LYSMD4-205ENST00000450512 FBLN2P98095 1184 aa40.63■■■■■ 4.09
LYSMD4-205ENST00000450512 WDR97A6NE52 1622 aa40.62■■■■■ 4.09
LYSMD4-205ENST00000450512 RIMBP3CA6NJZ7 1639 aa40.58■■■■■ 4.09
LYSMD4-205ENST00000450512 RIMBP3BA6NNM3 1639 aa40.58■■■■■ 4.09
LYSMD4-205ENST00000450512 RIMBP3Q9UFD9 1639 aa40.58■■■■■ 4.09
LYSMD4-205ENST00000450512 ARHGEF11O15085 1522 aa40.51■■■■■ 4.08
LYSMD4-205ENST00000450512 SNAPC4Q5SXM2 1469 aa40.51■■■■■ 4.07
LYSMD4-205ENST00000450512 GRIN2BQ13224 1484 aa40.46■■■■■ 4.07
LYSMD4-205ENST00000450512 MAGI1Q96QZ7 1491 aaPredicted RBP40.42■■■■■ 4.06
LYSMD4-205ENST00000450512 ABCA10Q8WWZ4 1543 aa40.38■■■■■ 4.06
LYSMD4-205ENST00000450512 CHMP7Q8WUX9 453 aaPredicted RBP40.38■■■■■ 4.05
LYSMD4-205ENST00000450512 GAPVD1Q14C86 1478 aa40.38■■■■■ 4.05
LYSMD4-205ENST00000450512 WRNQ14191 1432 aaPredicted RBP eCLIP40.32■■■■■ 4.04
LYSMD4-205ENST00000450512 SYNJ2O15056 1496 aa40.29■■■■■ 4.04
LYSMD4-205ENST00000450512 PBRM1Q86U86 1689 aa40.29■■■■■ 4.04
LYSMD4-205ENST00000450512 TOP2BQ02880 1626 aa40.27■■■■■ 4.04
LYSMD4-205ENST00000450512 ABCA5Q8WWZ7 1642 aa40.27■■■■■ 4.04
LYSMD4-205ENST00000450512 BIVM-ERCC5R4GMW8 1640 aa40.27■■■■■ 4.04
LYSMD4-205ENST00000450512 SYNJ1O43426 1573 aa40.23■■■■■ 4.03
LYSMD4-205ENST00000450512 CYB5RLQ6IPT4 315 aa40.23■■■■■ 4.03
LYSMD4-205ENST00000450512 CLASP1Q7Z460 1538 aa40.19■■■■■ 4.02
LYSMD4-205ENST00000450512 ARAP1Q96P48 1450 aa40.13■■■■■ 4.01
LYSMD4-205ENST00000450512 ADAMTS12P58397 1594 aa39.94■■■■□ 3.98
LYSMD4-205ENST00000450512 GRIN2AQ12879 1464 aa39.94■■■■□ 3.98
LYSMD4-205ENST00000450512 ERICH3Q5RHP9 1530 aa39.88■■■■□ 3.97
LYSMD4-205ENST00000450512 FHAD1B1AJZ9 1412 aa39.88■■■■□ 3.97
LYSMD4-205ENST00000450512 NUP160Q12769 1436 aa39.78■■■■□ 3.96
LYSMD4-205ENST00000450512 CEP170Q5SW79 1584 aa39.76■■■■□ 3.96
LYSMD4-205ENST00000450512 TRHP20396 242 aaPredicted RBP39.69■■■■□ 3.94
LYSMD4-205ENST00000450512 ERCC6L2Q5T890 1561 aa39.6■■■■□ 3.93
LYSMD4-205ENST00000450512 SHROOM2Q13796 1616 aa39.54■■■■□ 3.92
LYSMD4-205ENST00000450512 KIF27Q86VH2 1401 aa39.53■■■■□ 3.92
LYSMD4-205ENST00000450512 IGF1RP08069 1367 aa39.47■■■■□ 3.91
LYSMD4-205ENST00000450512 JPH4Q96JJ6 628 aa39.42■■■■□ 3.9
LYSMD4-205ENST00000450512 PRG4Q92954 1404 aaPredicted RBP39.4■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms