RNA–Protein interactions for RNA: ENST00000576530.2

TM4SF5-202, Transcript of transmembrane 4 L six family member 5, humanhuman

TSL 1 (best)

Gene TM4SF5, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF5-202ENST00000576530 NISCHQ9Y2I1 1504 aa45.64■■■■■ 4.9
TM4SF5-202ENST00000576530 CCDC180Q9P1Z9 1646 aa40.64■■■■■ 4.1
TM4SF5-202ENST00000576530 ABCC9O60706 1549 aa39.77■■■■□ 3.96
TM4SF5-202ENST00000576530 RB1CC1Q8TDY2 1594 aa38.27■■■■□ 3.72
TM4SF5-202ENST00000576530 NACADO15069 1562 aa38.2■■■■□ 3.71
TM4SF5-202ENST00000576530 DCAF8L2P0C7V8 631 aa38.1■■■■□ 3.69
TM4SF5-202ENST00000576530 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
TM4SF5-202ENST00000576530 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
TM4SF5-202ENST00000576530 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
TM4SF5-202ENST00000576530 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
TM4SF5-202ENST00000576530 PABPN1Q86U42 306 aaKnown RBP eCLIP37.13■■■■□ 3.53
TM4SF5-202ENST00000576530 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
TM4SF5-202ENST00000576530 SCRIBQ14160 1630 aa37.05■■■■□ 3.52
TM4SF5-202ENST00000576530 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
TM4SF5-202ENST00000576530 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
TM4SF5-202ENST00000576530 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
TM4SF5-202ENST00000576530 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
TM4SF5-202ENST00000576530 CECR2Q9BXF3 1484 aa35.74■■■■□ 3.31
TM4SF5-202ENST00000576530 SMARCA4P51532 1647 aa35.44■■■■□ 3.26
TM4SF5-202ENST00000576530 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
TM4SF5-202ENST00000576530 ATAD2BQ9ULI0 1458 aa35.24■■■■□ 3.23
TM4SF5-202ENST00000576530 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
TM4SF5-202ENST00000576530 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
TM4SF5-202ENST00000576530 MROH2BQ7Z745 1585 aa35.17■■■■□ 3.22
TM4SF5-202ENST00000576530 PEG3Q9GZU2 1588 aa35.1■■■■□ 3.21
TM4SF5-202ENST00000576530 HMGXB3Q12766 1538 aa35.07■■■■□ 3.21
TM4SF5-202ENST00000576530 BAZ1BQ9UIG0 1483 aaKnown RBP34.96■■■■□ 3.19
TM4SF5-202ENST00000576530 WIZO95785 1651 aa34.8■■■■□ 3.16
TM4SF5-202ENST00000576530 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
TM4SF5-202ENST00000576530 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
TM4SF5-202ENST00000576530 NESP48681 1621 aa34.41■■■■□ 3.1
TM4SF5-202ENST00000576530 LAMC3Q9Y6N6 1575 aa34.34■■■■□ 3.09
TM4SF5-202ENST00000576530 ERCC6Q03468 1493 aa34.29■■■■□ 3.08
TM4SF5-202ENST00000576530 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.07
TM4SF5-202ENST00000576530 PDS5BQ9NTI5 1447 aa34.08■■■■□ 3.05
TM4SF5-202ENST00000576530 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
TM4SF5-202ENST00000576530 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
TM4SF5-202ENST00000576530 CFTRP13569 1480 aa33.99■■■■□ 3.03
TM4SF5-202ENST00000576530 CUX2O14529 1486 aa33.96■■■■□ 3.03
TM4SF5-202ENST00000576530 THOC2Q8NI27 1593 aaKnown RBP33.93■■■■□ 3.02
TM4SF5-202ENST00000576530 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
TM4SF5-202ENST00000576530 PRDM2Q13029 1718 aa33.79■■■■□ 3
TM4SF5-202ENST00000576530 CEP164Q9UPV0 1460 aa33.78■■■■□ 3
TM4SF5-202ENST00000576530 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
TM4SF5-202ENST00000576530 MRC2Q9UBG0 1479 aa33.74■■■□□ 2.99
TM4SF5-202ENST00000576530 WDR62O43379 1518 aa33.64■■■□□ 2.98
TM4SF5-202ENST00000576530 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
TM4SF5-202ENST00000576530 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
TM4SF5-202ENST00000576530 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
TM4SF5-202ENST00000576530 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
TM4SF5-202ENST00000576530 IFT140Q96RY7 1462 aa33.07■■■□□ 2.88
TM4SF5-202ENST00000576530 CUX1P39880 1505 aa33■■■□□ 2.87
TM4SF5-202ENST00000576530 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
TM4SF5-202ENST00000576530 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
TM4SF5-202ENST00000576530 TARBP1Q13395 1621 aaKnown RBP32.93■■■□□ 2.86
TM4SF5-202ENST00000576530 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
TM4SF5-202ENST00000576530 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
TM4SF5-202ENST00000576530 SOGA1O94964 1423 aa32.83■■■□□ 2.85
TM4SF5-202ENST00000576530 RAD54L2Q9Y4B4 1467 aa32.82■■■□□ 2.84
TM4SF5-202ENST00000576530 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
TM4SF5-202ENST00000576530 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
TM4SF5-202ENST00000576530 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.832e-8■■■■■ 34.5
TM4SF5-202ENST00000576530 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
TM4SF5-202ENST00000576530 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
TM4SF5-202ENST00000576530 SYNJ1O43426 1573 aa32.7■■■□□ 2.82
TM4SF5-202ENST00000576530 WDR97A6NE52 1622 aa32.67■■■□□ 2.82
TM4SF5-202ENST00000576530 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
TM4SF5-202ENST00000576530 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
TM4SF5-202ENST00000576530 OSCARQ8IYS5 282 aa32.52■■■□□ 2.8
TM4SF5-202ENST00000576530 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
TM4SF5-202ENST00000576530 GRIN2BQ13224 1484 aa32.47■■■□□ 2.79
TM4SF5-202ENST00000576530 GAPVD1Q14C86 1478 aa32.46■■■□□ 2.79
TM4SF5-202ENST00000576530 PBRM1Q86U86 1689 aa32.43■■■□□ 2.78
TM4SF5-202ENST00000576530 CHD1O14646 1710 aa32.43■■■□□ 2.78
TM4SF5-202ENST00000576530 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
TM4SF5-202ENST00000576530 MAGI1Q96QZ7 1491 aaPredicted RBP32.4■■■□□ 2.78
TM4SF5-202ENST00000576530 FBLN2P98095 1184 aa32.33■■■□□ 2.77
TM4SF5-202ENST00000576530 SYNJ2O15056 1496 aa32.27■■■□□ 2.76
TM4SF5-202ENST00000576530 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
TM4SF5-202ENST00000576530 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
TM4SF5-202ENST00000576530 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
TM4SF5-202ENST00000576530 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
TM4SF5-202ENST00000576530 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
TM4SF5-202ENST00000576530 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
TM4SF5-202ENST00000576530 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
TM4SF5-202ENST00000576530 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
TM4SF5-202ENST00000576530 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
TM4SF5-202ENST00000576530 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
TM4SF5-202ENST00000576530 ARHGEF11O15085 1522 aa32.02■■■□□ 2.72
TM4SF5-202ENST00000576530 IGF1RP08069 1367 aa31.94■■■□□ 2.7
TM4SF5-202ENST00000576530 NUP160Q12769 1436 aa31.92■■■□□ 2.7
TM4SF5-202ENST00000576530 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
TM4SF5-202ENST00000576530 CUL7Q14999 1698 aa31.91■■■□□ 2.7
TM4SF5-202ENST00000576530 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
TM4SF5-202ENST00000576530 RUSC2Q8N2Y8 1516 aa31.75■■■□□ 2.67
TM4SF5-202ENST00000576530 CARMIL1Q5VZK9 1371 aa31.75■■■□□ 2.67
TM4SF5-202ENST00000576530 ARAP1Q96P48 1450 aa31.75■■■□□ 2.67
TM4SF5-202ENST00000576530 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
TM4SF5-202ENST00000576530 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
TM4SF5-202ENST00000576530 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms