RNA–Protein interactions for RNA: ENST00000533853.1

TKFC-218, Transcript of triokinase and FMN cyclase, humanhuman

TSL 3

Gene TKFC, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-218ENST00000533853 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
TKFC-218ENST00000533853 ABCC9O60706 1549 aa27.89■■■□□ 2.06
TKFC-218ENST00000533853 CCDC180Q9P1Z9 1646 aa27.03■■□□□ 1.92
TKFC-218ENST00000533853 DNAJC5BQ9UF47 199 aa26.82■■□□□ 1.88
TKFC-218ENST00000533853 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
TKFC-218ENST00000533853 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
TKFC-218ENST00000533853 NACADO15069 1562 aa25.73■■□□□ 1.71
TKFC-218ENST00000533853 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
TKFC-218ENST00000533853 UNC13AQ9UPW8 1703 aa25.53■■□□□ 1.68
TKFC-218ENST00000533853 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
TKFC-218ENST00000533853 CECR2Q9BXF3 1484 aa25.17■■□□□ 1.62
TKFC-218ENST00000533853 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
TKFC-218ENST00000533853 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
TKFC-218ENST00000533853 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
TKFC-218ENST00000533853 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
TKFC-218ENST00000533853 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
TKFC-218ENST00000533853 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
TKFC-218ENST00000533853 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
TKFC-218ENST00000533853 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
TKFC-218ENST00000533853 CUX2O14529 1486 aa24.27■■□□□ 1.48
TKFC-218ENST00000533853 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
TKFC-218ENST00000533853 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
TKFC-218ENST00000533853 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
TKFC-218ENST00000533853 NESP48681 1621 aa23.75■■□□□ 1.39
TKFC-218ENST00000533853 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
TKFC-218ENST00000533853 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
TKFC-218ENST00000533853 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
TKFC-218ENST00000533853 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
TKFC-218ENST00000533853 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
TKFC-218ENST00000533853 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
TKFC-218ENST00000533853 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
TKFC-218ENST00000533853 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
TKFC-218ENST00000533853 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
TKFC-218ENST00000533853 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
TKFC-218ENST00000533853 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
TKFC-218ENST00000533853 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
TKFC-218ENST00000533853 WDR62O43379 1518 aa23.11■■□□□ 1.29
TKFC-218ENST00000533853 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
TKFC-218ENST00000533853 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
TKFC-218ENST00000533853 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
TKFC-218ENST00000533853 CEP164Q9UPV0 1460 aa22.91■■□□□ 1.26
TKFC-218ENST00000533853 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
TKFC-218ENST00000533853 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
TKFC-218ENST00000533853 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
TKFC-218ENST00000533853 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
TKFC-218ENST00000533853 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
TKFC-218ENST00000533853 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
TKFC-218ENST00000533853 WIZO95785 1651 aa22.68■■□□□ 1.22
TKFC-218ENST00000533853 CFTRP13569 1480 aa22.61■■□□□ 1.21
TKFC-218ENST00000533853 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
TKFC-218ENST00000533853 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
TKFC-218ENST00000533853 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
TKFC-218ENST00000533853 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
TKFC-218ENST00000533853 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
TKFC-218ENST00000533853 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
TKFC-218ENST00000533853 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
TKFC-218ENST00000533853 CHD1O14646 1710 aa22.33■■□□□ 1.17
TKFC-218ENST00000533853 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
TKFC-218ENST00000533853 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
TKFC-218ENST00000533853 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
TKFC-218ENST00000533853 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
TKFC-218ENST00000533853 FBLN2P98095 1184 aa22.25■■□□□ 1.15
TKFC-218ENST00000533853 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.154e-6■■■□□ 16.4
TKFC-218ENST00000533853 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
TKFC-218ENST00000533853 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
TKFC-218ENST00000533853 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
TKFC-218ENST00000533853 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
TKFC-218ENST00000533853 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
TKFC-218ENST00000533853 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
TKFC-218ENST00000533853 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
TKFC-218ENST00000533853 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
TKFC-218ENST00000533853 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
TKFC-218ENST00000533853 SYNJ1O43426 1573 aa21.95■■□□□ 1.11
TKFC-218ENST00000533853 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
TKFC-218ENST00000533853 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
TKFC-218ENST00000533853 SOGA1O94964 1423 aa21.89■■□□□ 1.09
TKFC-218ENST00000533853 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
TKFC-218ENST00000533853 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
TKFC-218ENST00000533853 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
TKFC-218ENST00000533853 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
TKFC-218ENST00000533853 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
TKFC-218ENST00000533853 ERCC6L2Q5T890 1561 aa21.72■■□□□ 1.07
TKFC-218ENST00000533853 CUX1P39880 1505 aa21.66■■□□□ 1.06
TKFC-218ENST00000533853 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
TKFC-218ENST00000533853 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
TKFC-218ENST00000533853 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.05
TKFC-218ENST00000533853 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
TKFC-218ENST00000533853 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
TKFC-218ENST00000533853 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
TKFC-218ENST00000533853 NUP160Q12769 1436 aa21.47■■□□□ 1.03
TKFC-218ENST00000533853 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
TKFC-218ENST00000533853 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
TKFC-218ENST00000533853 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
TKFC-218ENST00000533853 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
TKFC-218ENST00000533853 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
TKFC-218ENST00000533853 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
TKFC-218ENST00000533853 KDM6BO15054 1643 aa21.34■■□□□ 1.01
TKFC-218ENST00000533853 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
TKFC-218ENST00000533853 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
TKFC-218ENST00000533853 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms