RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, humanhuman

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP21-223ENST00000436442 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
RPP21-223ENST00000436442 ABCC9O60706 1549 aa23.89■■□□□ 1.41
RPP21-223ENST00000436442 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
RPP21-223ENST00000436442 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
RPP21-223ENST00000436442 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
RPP21-223ENST00000436442 NACADO15069 1562 aa22.29■■□□□ 1.16
RPP21-223ENST00000436442 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
RPP21-223ENST00000436442 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
RPP21-223ENST00000436442 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
RPP21-223ENST00000436442 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
RPP21-223ENST00000436442 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
RPP21-223ENST00000436442 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
RPP21-223ENST00000436442 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
RPP21-223ENST00000436442 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.05
RPP21-223ENST00000436442 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
RPP21-223ENST00000436442 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
RPP21-223ENST00000436442 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
RPP21-223ENST00000436442 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
RPP21-223ENST00000436442 SCRIBQ14160 1630 aa21.29■■□□□ 1
RPP21-223ENST00000436442 CUX2O14529 1486 aa20.83■□□□□ 0.93
RPP21-223ENST00000436442 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
RPP21-223ENST00000436442 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
RPP21-223ENST00000436442 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
RPP21-223ENST00000436442 NESP48681 1621 aa20.43■□□□□ 0.86
RPP21-223ENST00000436442 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
RPP21-223ENST00000436442 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
RPP21-223ENST00000436442 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
RPP21-223ENST00000436442 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
RPP21-223ENST00000436442 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
RPP21-223ENST00000436442 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
RPP21-223ENST00000436442 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
RPP21-223ENST00000436442 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
RPP21-223ENST00000436442 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
RPP21-223ENST00000436442 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
RPP21-223ENST00000436442 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
RPP21-223ENST00000436442 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
RPP21-223ENST00000436442 WDR62O43379 1518 aa19.94■□□□□ 0.78
RPP21-223ENST00000436442 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
RPP21-223ENST00000436442 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
RPP21-223ENST00000436442 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
RPP21-223ENST00000436442 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
RPP21-223ENST00000436442 WIZO95785 1651 aa19.68■□□□□ 0.74
RPP21-223ENST00000436442 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
RPP21-223ENST00000436442 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
RPP21-223ENST00000436442 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
RPP21-223ENST00000436442 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
RPP21-223ENST00000436442 CFTRP13569 1480 aa19.61■□□□□ 0.73
RPP21-223ENST00000436442 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
RPP21-223ENST00000436442 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
RPP21-223ENST00000436442 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
RPP21-223ENST00000436442 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
RPP21-223ENST00000436442 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
RPP21-223ENST00000436442 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
RPP21-223ENST00000436442 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
RPP21-223ENST00000436442 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
RPP21-223ENST00000436442 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
RPP21-223ENST00000436442 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
RPP21-223ENST00000436442 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
RPP21-223ENST00000436442 CHD1O14646 1710 aa19.25■□□□□ 0.67
RPP21-223ENST00000436442 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
RPP21-223ENST00000436442 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
RPP21-223ENST00000436442 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
RPP21-223ENST00000436442 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
RPP21-223ENST00000436442 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.665e-7■■■■□ 19.7
RPP21-223ENST00000436442 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
RPP21-223ENST00000436442 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
RPP21-223ENST00000436442 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
RPP21-223ENST00000436442 FBLN2P98095 1184 aa18.99■□□□□ 0.63
RPP21-223ENST00000436442 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
RPP21-223ENST00000436442 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
RPP21-223ENST00000436442 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
RPP21-223ENST00000436442 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
RPP21-223ENST00000436442 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
RPP21-223ENST00000436442 SOGA1O94964 1423 aa18.9■□□□□ 0.62
RPP21-223ENST00000436442 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
RPP21-223ENST00000436442 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
RPP21-223ENST00000436442 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.6
RPP21-223ENST00000436442 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
RPP21-223ENST00000436442 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
RPP21-223ENST00000436442 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
RPP21-223ENST00000436442 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
RPP21-223ENST00000436442 CUX1P39880 1505 aa18.77■□□□□ 0.6
RPP21-223ENST00000436442 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
RPP21-223ENST00000436442 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
RPP21-223ENST00000436442 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
RPP21-223ENST00000436442 KIF13AQ9H1H9 1805 aa18.64■□□□□ 0.57
RPP21-223ENST00000436442 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
RPP21-223ENST00000436442 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
RPP21-223ENST00000436442 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
RPP21-223ENST00000436442 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
RPP21-223ENST00000436442 NUP160Q12769 1436 aa18.57■□□□□ 0.56
RPP21-223ENST00000436442 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
RPP21-223ENST00000436442 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
RPP21-223ENST00000436442 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
RPP21-223ENST00000436442 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
RPP21-223ENST00000436442 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
RPP21-223ENST00000436442 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
RPP21-223ENST00000436442 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
RPP21-223ENST00000436442 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
RPP21-223ENST00000436442 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms