RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 NISCHQ9Y2I1 1504 aa50.46■■■■■ 5.67
PAF1-207ENST00000598127 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
PAF1-207ENST00000598127 ABCC9O60706 1549 aa43.85■■■■■ 4.61
PAF1-207ENST00000598127 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
PAF1-207ENST00000598127 DCAF8L2P0C7V8 631 aa42.19■■■■■ 4.34
PAF1-207ENST00000598127 NACADO15069 1562 aa42.18■■■■■ 4.34
PAF1-207ENST00000598127 ZCCHC6Q5VYS8 1495 aaKnown RBP42■■■■■ 4.31
PAF1-207ENST00000598127 MYO15BQ96JP2 1530 aa41.94■■■■■ 4.3
PAF1-207ENST00000598127 DCAF1Q9Y4B6 1507 aa41.76■■■■■ 4.28
PAF1-207ENST00000598127 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
PAF1-207ENST00000598127 PABPN1Q86U42 306 aaKnown RBP eCLIP41■■■■■ 4.15
PAF1-207ENST00000598127 BICRAQ9NZM4 1560 aa40.93■■■■■ 4.14
PAF1-207ENST00000598127 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
PAF1-207ENST00000598127 SHROOM4Q9ULL8 1493 aa40.49■■■■■ 4.07
PAF1-207ENST00000598127 DNAJC5BQ9UF47 199 aa40.28■■■■■ 4.04
PAF1-207ENST00000598127 EIF4G1Q04637 1599 aaKnown RBP39.84■■■■□ 3.97
PAF1-207ENST00000598127 CC2D2AQ9P2K1 1620 aa39.69■■■■□ 3.94
PAF1-207ENST00000598127 CECR2Q9BXF3 1484 aa39.4■■■■□ 3.9
PAF1-207ENST00000598127 SMARCA4P51532 1647 aa39.14■■■■□ 3.86
PAF1-207ENST00000598127 BAZ1AQ9NRL2 1556 aaPredicted RBP39.1■■■■□ 3.85
PAF1-207ENST00000598127 NCAPD3P42695 1498 aa38.93■■■■□ 3.82
PAF1-207ENST00000598127 ATAD2BQ9ULI0 1458 aa38.93■■■■□ 3.82
PAF1-207ENST00000598127 SMARCA2P51531 1590 aa38.89■■■■□ 3.82
PAF1-207ENST00000598127 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
PAF1-207ENST00000598127 PEG3Q9GZU2 1588 aa38.77■■■■□ 3.8
PAF1-207ENST00000598127 HMGXB3Q12766 1538 aa38.7■■■■□ 3.79
PAF1-207ENST00000598127 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
PAF1-207ENST00000598127 WIZO95785 1651 aa38.48■■■■□ 3.75
PAF1-207ENST00000598127 RSF1Q96T23 1441 aaPredicted RBP38.45■■■■□ 3.75
PAF1-207ENST00000598127 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
PAF1-207ENST00000598127 NESP48681 1621 aa37.95■■■■□ 3.67
PAF1-207ENST00000598127 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
PAF1-207ENST00000598127 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
PAF1-207ENST00000598127 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
PAF1-207ENST00000598127 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
PAF1-207ENST00000598127 CCDC88BA6NC98 1476 aa37.63■■■■□ 3.61
PAF1-207ENST00000598127 CFTRP13569 1480 aa37.56■■■■□ 3.6
PAF1-207ENST00000598127 KIF21AQ7Z4S6 1674 aa37.52■■■■□ 3.6
PAF1-207ENST00000598127 SUPT5HO00267 1087 aaKnown RBP37.51■■■■□ 3.6
PAF1-207ENST00000598127 CUX2O14529 1486 aa37.4■■■■□ 3.58
PAF1-207ENST00000598127 THOC2Q8NI27 1593 aaKnown RBP37.36■■■■□ 3.57
PAF1-207ENST00000598127 FANCD2Q9BXW9 1451 aa37.33■■■■□ 3.57
PAF1-207ENST00000598127 PRDM2Q13029 1718 aa37.31■■■■□ 3.56
PAF1-207ENST00000598127 CEP164Q9UPV0 1460 aa37.28■■■■□ 3.56
PAF1-207ENST00000598127 MRC2Q9UBG0 1479 aa37.22■■■■□ 3.55
PAF1-207ENST00000598127 WDR62O43379 1518 aa37.1■■■■□ 3.53
PAF1-207ENST00000598127 URB2Q14146 1524 aaKnown RBP36.95■■■■□ 3.51
PAF1-207ENST00000598127 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
PAF1-207ENST00000598127 TOPBP1Q92547 1522 aa36.75■■■■□ 3.47
PAF1-207ENST00000598127 DNMBPQ6XZF7 1577 aa36.7■■■■□ 3.46
PAF1-207ENST00000598127 IFT140Q96RY7 1462 aa36.5■■■■□ 3.43
PAF1-207ENST00000598127 CUX1P39880 1505 aa36.46■■■■□ 3.43
PAF1-207ENST00000598127 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
PAF1-207ENST00000598127 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
PAF1-207ENST00000598127 FGD5Q6ZNL6 1462 aa36.33■■■■□ 3.41
PAF1-207ENST00000598127 ZNF608Q9ULD9 1512 aaPredicted RBP36.33■■■■□ 3.41
PAF1-207ENST00000598127 SOGA1O94964 1423 aa36.32■■■■□ 3.4
PAF1-207ENST00000598127 DNAJC5Q9H3Z4 198 aa36.29■■■■□ 3.4
PAF1-207ENST00000598127 RAD54L2Q9Y4B4 1467 aa36.27■■■■□ 3.4
PAF1-207ENST00000598127 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
PAF1-207ENST00000598127 TOP2BQ02880 1626 aa36.17■■■■□ 3.38
PAF1-207ENST00000598127 BIVM-ERCC5R4GMW8 1640 aa36.17■■■■□ 3.38
PAF1-207ENST00000598127 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
PAF1-207ENST00000598127 AQRO60306 1485 aaKnown RBP eCLIP36.15■■■■□ 3.382e-8■■■■■ 39.4
PAF1-207ENST00000598127 SYNJ1O43426 1573 aa36.14■■■■□ 3.38
PAF1-207ENST00000598127 TDRD9Q8NDG6 1382 aaKnown RBP36.09■■■■□ 3.37
PAF1-207ENST00000598127 WDR97A6NE52 1622 aa36.07■■■■□ 3.36
PAF1-207ENST00000598127 ABCA10Q8WWZ4 1543 aa36■■■■□ 3.35
PAF1-207ENST00000598127 OSCARQ8IYS5 282 aa35.91■■■■□ 3.34
PAF1-207ENST00000598127 GAPVD1Q14C86 1478 aa35.87■■■■□ 3.33
PAF1-207ENST00000598127 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
PAF1-207ENST00000598127 ABCA5Q8WWZ7 1642 aa35.84■■■■□ 3.33
PAF1-207ENST00000598127 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
PAF1-207ENST00000598127 SNAPC4Q5SXM2 1469 aa35.79■■■■□ 3.32
PAF1-207ENST00000598127 MAGI1Q96QZ7 1491 aaPredicted RBP35.76■■■■□ 3.32
PAF1-207ENST00000598127 CHD1O14646 1710 aa35.75■■■■□ 3.31
PAF1-207ENST00000598127 FBLN2P98095 1184 aa35.73■■■■□ 3.31
PAF1-207ENST00000598127 CHMP7Q8WUX9 453 aaPredicted RBP35.65■■■■□ 3.3
PAF1-207ENST00000598127 SYNJ2O15056 1496 aa35.62■■■■□ 3.29
PAF1-207ENST00000598127 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.29
PAF1-207ENST00000598127 KIF27Q86VH2 1401 aa35.49■■■■□ 3.27
PAF1-207ENST00000598127 ADAMTS12P58397 1594 aa35.48■■■■□ 3.27
PAF1-207ENST00000598127 FHAD1B1AJZ9 1412 aa35.46■■■■□ 3.27
PAF1-207ENST00000598127 TRIM41Q8WV44 630 aa35.44■■■■□ 3.26
PAF1-207ENST00000598127 GRIN2AQ12879 1464 aa35.39■■■■□ 3.26
PAF1-207ENST00000598127 IGF1RP08069 1367 aa35.38■■■■□ 3.25
PAF1-207ENST00000598127 CLASP1Q7Z460 1538 aa35.34■■■■□ 3.25
PAF1-207ENST00000598127 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
PAF1-207ENST00000598127 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
PAF1-207ENST00000598127 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
PAF1-207ENST00000598127 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
PAF1-207ENST00000598127 CUL7Q14999 1698 aa35.25■■■■□ 3.23
PAF1-207ENST00000598127 NUP160Q12769 1436 aa35.23■■■■□ 3.23
PAF1-207ENST00000598127 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
PAF1-207ENST00000598127 RUSC2Q8N2Y8 1516 aa35.18■■■■□ 3.22
PAF1-207ENST00000598127 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
PAF1-207ENST00000598127 CHIC1Q5VXU3 224 aa35.03■■■■□ 3.2
PAF1-207ENST00000598127 CYB5RLQ6IPT4 315 aa34.99■■■■□ 3.19
PAF1-207ENST00000598127 SHROOM2Q13796 1616 aa34.98■■■■□ 3.19
PAF1-207ENST00000598127 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms