RNA–Protein interactions for RNA: ENST00000452396.5

ERI3-203, Transcript of ERI1 exoribonuclease family member 3, humanhuman

TSL 3

Gene ERI3, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-203ENST00000452396 NISCHQ9Y2I1 1504 aa53.58■■■■■ 6.17
ERI3-203ENST00000452396 CCDC180Q9P1Z9 1646 aa47.3■■■■■ 5.16
ERI3-203ENST00000452396 ABCC9O60706 1549 aa45.98■■■■■ 4.95
ERI3-203ENST00000452396 DCAF8L2P0C7V8 631 aa44.8■■■■■ 4.76
ERI3-203ENST00000452396 ZCCHC6Q5VYS8 1495 aaKnown RBP44.69■■■■■ 4.74
ERI3-203ENST00000452396 NACADO15069 1562 aa44.49■■■■■ 4.71
ERI3-203ENST00000452396 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
ERI3-203ENST00000452396 MYO15BQ96JP2 1530 aa44.39■■■■■ 4.7
ERI3-203ENST00000452396 DCAF1Q9Y4B6 1507 aa44.35■■■■■ 4.69
ERI3-203ENST00000452396 SCRIBQ14160 1630 aa43.24■■■■■ 4.51
ERI3-203ENST00000452396 UNC13AQ9UPW8 1703 aa43.21■■■■■ 4.51
ERI3-203ENST00000452396 PABPN1Q86U42 306 aaKnown RBP eCLIP43.15■■■■■ 4.5
ERI3-203ENST00000452396 BICRAQ9NZM4 1560 aa42.98■■■■■ 4.47
ERI3-203ENST00000452396 SHROOM4Q9ULL8 1493 aa42.67■■■■■ 4.42
ERI3-203ENST00000452396 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
ERI3-203ENST00000452396 EIF4G1Q04637 1599 aaKnown RBP41.84■■■■■ 4.29
ERI3-203ENST00000452396 CECR2Q9BXF3 1484 aa41.68■■■■■ 4.26
ERI3-203ENST00000452396 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
ERI3-203ENST00000452396 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
ERI3-203ENST00000452396 SMARCA4P51532 1647 aa41.41■■■■■ 4.22
ERI3-203ENST00000452396 MROH2BQ7Z745 1585 aa41.28■■■■■ 4.2
ERI3-203ENST00000452396 ATAD2BQ9ULI0 1458 aa41.16■■■■■ 4.18
ERI3-203ENST00000452396 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
ERI3-203ENST00000452396 NCAPD3P42695 1498 aa41.09■■■■■ 4.17
ERI3-203ENST00000452396 RSF1Q96T23 1441 aaPredicted RBP41.04■■■■■ 4.16
ERI3-203ENST00000452396 PEG3Q9GZU2 1588 aa41.01■■■■■ 4.16
ERI3-203ENST00000452396 BAZ1BQ9UIG0 1483 aaKnown RBP40.84■■■■■ 4.13
ERI3-203ENST00000452396 HMGXB3Q12766 1538 aa40.84■■■■■ 4.13
ERI3-203ENST00000452396 WIZO95785 1651 aa40.81■■■■■ 4.12
ERI3-203ENST00000452396 SUPT5HO00267 1087 aaKnown RBP40.48■■■■■ 4.07
ERI3-203ENST00000452396 TOP2AP11388 1531 aaKnown RBP40.44■■■■■ 4.06
ERI3-203ENST00000452396 CCDC88BA6NC98 1476 aa40.03■■■■■ 4
ERI3-203ENST00000452396 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
ERI3-203ENST00000452396 NESP48681 1621 aa39.89■■■■□ 3.98
ERI3-203ENST00000452396 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
ERI3-203ENST00000452396 CFTRP13569 1480 aa39.76■■■■□ 3.96
ERI3-203ENST00000452396 PDS5BQ9NTI5 1447 aa39.71■■■■□ 3.95
ERI3-203ENST00000452396 ERCC6Q03468 1493 aa39.64■■■■□ 3.94
ERI3-203ENST00000452396 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
ERI3-203ENST00000452396 CEP164Q9UPV0 1460 aa39.34■■■■□ 3.89
ERI3-203ENST00000452396 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.88
ERI3-203ENST00000452396 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
ERI3-203ENST00000452396 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
ERI3-203ENST00000452396 THOC2Q8NI27 1593 aaKnown RBP39.09■■■■□ 3.85
ERI3-203ENST00000452396 CUX2O14529 1486 aa39.02■■■■□ 3.84
ERI3-203ENST00000452396 WDR62O43379 1518 aa38.97■■■■□ 3.83
ERI3-203ENST00000452396 URB2Q14146 1524 aaKnown RBP38.97■■■■□ 3.83
ERI3-203ENST00000452396 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
ERI3-203ENST00000452396 TOPBP1Q92547 1522 aa38.84■■■■□ 3.81
ERI3-203ENST00000452396 DNMBPQ6XZF7 1577 aa38.8■■■■□ 3.8
ERI3-203ENST00000452396 WRNQ14191 1432 aaPredicted RBP eCLIP38.7■■■■□ 3.79
ERI3-203ENST00000452396 CUX1P39880 1505 aa38.69■■■■□ 3.78
ERI3-203ENST00000452396 POLA1P09884 1462 aaPredicted RBP38.54■■■■□ 3.76
ERI3-203ENST00000452396 IFT140Q96RY7 1462 aa38.53■■■■□ 3.76
ERI3-203ENST00000452396 FGD5Q6ZNL6 1462 aa38.51■■■■□ 3.76
ERI3-203ENST00000452396 SOGA1O94964 1423 aa38.48■■■■□ 3.75
ERI3-203ENST00000452396 TOP2BQ02880 1626 aa38.47■■■■□ 3.75
ERI3-203ENST00000452396 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
ERI3-203ENST00000452396 BIVM-ERCC5R4GMW8 1640 aa38.41■■■■□ 3.74
ERI3-203ENST00000452396 RAD54L2Q9Y4B4 1467 aa38.39■■■■□ 3.74
ERI3-203ENST00000452396 TARBP1Q13395 1621 aaKnown RBP38.31■■■■□ 3.72
ERI3-203ENST00000452396 ZNF608Q9ULD9 1512 aaPredicted RBP38.26■■■■□ 3.72
ERI3-203ENST00000452396 TRIM41Q8WV44 630 aa38.24■■■■□ 3.71
ERI3-203ENST00000452396 TDRD9Q8NDG6 1382 aaKnown RBP38.2■■■■□ 3.71
ERI3-203ENST00000452396 ABCA10Q8WWZ4 1543 aa38.18■■■■□ 3.7
ERI3-203ENST00000452396 AQRO60306 1485 aaKnown RBP eCLIP38.16■■■■□ 3.72e-6■■■■□ 23.8
ERI3-203ENST00000452396 WDR97A6NE52 1622 aa38.07■■■■□ 3.68
ERI3-203ENST00000452396 EIF4G3O43432 1585 aaKnown RBP38.04■■■■□ 3.68
ERI3-203ENST00000452396 CHIC1Q5VXU3 224 aa38.03■■■■□ 3.68
ERI3-203ENST00000452396 GAPVD1Q14C86 1478 aa38.01■■■■□ 3.67
ERI3-203ENST00000452396 GRIN2BQ13224 1484 aa37.94■■■■□ 3.66
ERI3-203ENST00000452396 KIF27Q86VH2 1401 aa37.89■■■■□ 3.66
ERI3-203ENST00000452396 ABCA5Q8WWZ7 1642 aa37.88■■■■□ 3.65
ERI3-203ENST00000452396 SNAPC4Q5SXM2 1469 aa37.77■■■■□ 3.64
ERI3-203ENST00000452396 MAGI1Q96QZ7 1491 aaPredicted RBP37.76■■■■□ 3.63
ERI3-203ENST00000452396 FBLN2P98095 1184 aa37.73■■■■□ 3.63
ERI3-203ENST00000452396 ERICH3Q5RHP9 1530 aa37.72■■■■□ 3.63
ERI3-203ENST00000452396 CHMP7Q8WUX9 453 aaPredicted RBP37.71■■■■□ 3.63
ERI3-203ENST00000452396 PBRM1Q86U86 1689 aa37.71■■■■□ 3.63
ERI3-203ENST00000452396 IGF1RP08069 1367 aa37.7■■■■□ 3.63
ERI3-203ENST00000452396 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
ERI3-203ENST00000452396 SYNJ2O15056 1496 aa37.61■■■■□ 3.61
ERI3-203ENST00000452396 FHAD1B1AJZ9 1412 aa37.61■■■■□ 3.61
ERI3-203ENST00000452396 RUSC2Q8N2Y8 1516 aa37.6■■■■□ 3.61
ERI3-203ENST00000452396 CARMIL1Q5VZK9 1371 aa37.5■■■■□ 3.59
ERI3-203ENST00000452396 ADAMTS12P58397 1594 aa37.5■■■■□ 3.59
ERI3-203ENST00000452396 EEA1Q15075 1411 aa37.48■■■■□ 3.59
ERI3-203ENST00000452396 CSRNP3Q8WYN3 585 aa37.45■■■■□ 3.59
ERI3-203ENST00000452396 CHD1O14646 1710 aa37.43■■■■□ 3.58
ERI3-203ENST00000452396 GRIN2AQ12879 1464 aa37.41■■■■□ 3.58
ERI3-203ENST00000452396 CUL7Q14999 1698 aa37.41■■■■□ 3.58
ERI3-203ENST00000452396 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
ERI3-203ENST00000452396 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
ERI3-203ENST00000452396 RAPGEF2Q9Y4G8 1499 aa37.27■■■■□ 3.56
ERI3-203ENST00000452396 NUP160Q12769 1436 aa37.23■■■■□ 3.55
ERI3-203ENST00000452396 PRXQ9BXM0 1461 aa37.22■■■■□ 3.55
ERI3-203ENST00000452396 CEP170Q5SW79 1584 aa37.12■■■■□ 3.53
ERI3-203ENST00000452396 CLASP1Q7Z460 1538 aa37.1■■■■□ 3.53
ERI3-203ENST00000452396 KIAA0586Q9BVV6 1533 aa37.04■■■■□ 3.52
ERI3-203ENST00000452396 JPH4Q96JJ6 628 aa37.01■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms