RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 NISCHQ9Y2I1 1504 aa61.8■■■■■ 7.48
LYSMD4-207ENST00000484050 CCDC180Q9P1Z9 1646 aa55.31■■■■■ 6.44
LYSMD4-207ENST00000484050 ABCC9O60706 1549 aa54.8■■■■■ 6.36
LYSMD4-207ENST00000484050 RB1CC1Q8TDY2 1594 aa52.38■■■■■ 5.98
LYSMD4-207ENST00000484050 NACADO15069 1562 aa52.13■■■■■ 5.93
LYSMD4-207ENST00000484050 DCAF8L2P0C7V8 631 aa51.91■■■■■ 5.9
LYSMD4-207ENST00000484050 MYO15BQ96JP2 1530 aa51.54■■■■■ 5.84
LYSMD4-207ENST00000484050 ZCCHC6Q5VYS8 1495 aaKnown RBP51.33■■■■■ 5.81
LYSMD4-207ENST00000484050 UNC13AQ9UPW8 1703 aa51.3■■■■■ 5.8
LYSMD4-207ENST00000484050 PABPN1Q86U42 306 aaKnown RBP eCLIP51.07■■■■■ 5.77
LYSMD4-207ENST00000484050 DCAF1Q9Y4B6 1507 aa51.07■■■■■ 5.77
LYSMD4-207ENST00000484050 DNAJC5BQ9UF47 199 aa50.98■■■■■ 5.75
LYSMD4-207ENST00000484050 BICRAQ9NZM4 1560 aa50.88■■■■■ 5.74
LYSMD4-207ENST00000484050 SCRIBQ14160 1630 aa50.42■■■■■ 5.66
LYSMD4-207ENST00000484050 SHROOM4Q9ULL8 1493 aa50.17■■■■■ 5.62
LYSMD4-207ENST00000484050 CC2D2AQ9P2K1 1620 aa49.56■■■■■ 5.52
LYSMD4-207ENST00000484050 EIF4G1Q04637 1599 aaKnown RBP49.56■■■■■ 5.52
LYSMD4-207ENST00000484050 CECR2Q9BXF3 1484 aa49.31■■■■■ 5.48
LYSMD4-207ENST00000484050 SMARCA4P51532 1647 aa48.14■■■■■ 5.3
LYSMD4-207ENST00000484050 NCAPD3P42695 1498 aa48.1■■■■■ 5.29
LYSMD4-207ENST00000484050 ATAD2BQ9ULI0 1458 aa48.03■■■■■ 5.28
LYSMD4-207ENST00000484050 BAZ1AQ9NRL2 1556 aaPredicted RBP47.94■■■■■ 5.26
LYSMD4-207ENST00000484050 SMARCA2P51531 1590 aa47.93■■■■■ 5.26
LYSMD4-207ENST00000484050 HMGXB3Q12766 1538 aa47.81■■■■■ 5.24
LYSMD4-207ENST00000484050 PEG3Q9GZU2 1588 aa47.66■■■■■ 5.22
LYSMD4-207ENST00000484050 MROH2BQ7Z745 1585 aa47.65■■■■■ 5.22
LYSMD4-207ENST00000484050 BAZ1BQ9UIG0 1483 aaKnown RBP47.59■■■■■ 5.21
LYSMD4-207ENST00000484050 ERCC6Q03468 1493 aa47.27■■■■■ 5.16
LYSMD4-207ENST00000484050 NESP48681 1621 aa47.23■■■■■ 5.15
LYSMD4-207ENST00000484050 WIZO95785 1651 aa47.13■■■■■ 5.14
LYSMD4-207ENST00000484050 CUX2O14529 1486 aa47.02■■■■■ 5.12
LYSMD4-207ENST00000484050 LAMC3Q9Y6N6 1575 aa46.97■■■■■ 5.11
LYSMD4-207ENST00000484050 RSF1Q96T23 1441 aaPredicted RBP46.8■■■■■ 5.08
LYSMD4-207ENST00000484050 KIF21AQ7Z4S6 1674 aa46.7■■■■■ 5.07
LYSMD4-207ENST00000484050 THOC2Q8NI27 1593 aaKnown RBP46.69■■■■■ 5.07
LYSMD4-207ENST00000484050 CADPSQ9ULU8 1353 aa46.64■■■■■ 5.06
LYSMD4-207ENST00000484050 PDS5BQ9NTI5 1447 aa46.63■■■■■ 5.06
LYSMD4-207ENST00000484050 TOP2AP11388 1531 aaKnown RBP46.53■■■■■ 5.04
LYSMD4-207ENST00000484050 DNAJC5Q9H3Z4 198 aa46.43■■■■■ 5.02
LYSMD4-207ENST00000484050 MRC2Q9UBG0 1479 aa46.24■■■■■ 4.99
LYSMD4-207ENST00000484050 CFTRP13569 1480 aa46.23■■■■■ 4.99
LYSMD4-207ENST00000484050 CEP164Q9UPV0 1460 aa46.15■■■■■ 4.98
LYSMD4-207ENST00000484050 FANCD2Q9BXW9 1451 aa46.14■■■■■ 4.98
LYSMD4-207ENST00000484050 WDR62O43379 1518 aa46.13■■■■■ 4.97
LYSMD4-207ENST00000484050 CCDC88BA6NC98 1476 aa45.99■■■■■ 4.95
LYSMD4-207ENST00000484050 PRDM2Q13029 1718 aa45.92■■■■■ 4.94
LYSMD4-207ENST00000484050 URB2Q14146 1524 aaKnown RBP45.76■■■■■ 4.92
LYSMD4-207ENST00000484050 TOPBP1Q92547 1522 aa45.33■■■■■ 4.85
LYSMD4-207ENST00000484050 ABCC8Q09428 1581 aa45.23■■■■■ 4.83
LYSMD4-207ENST00000484050 DNMBPQ6XZF7 1577 aa45.22■■■■■ 4.83
LYSMD4-207ENST00000484050 IFT140Q96RY7 1462 aa45.19■■■■■ 4.82
LYSMD4-207ENST00000484050 ZNF608Q9ULD9 1512 aaPredicted RBP45.11■■■■■ 4.81
LYSMD4-207ENST00000484050 SUPT5HO00267 1087 aaKnown RBP45.06■■■■■ 4.8
LYSMD4-207ENST00000484050 TARBP1Q13395 1621 aaKnown RBP44.93■■■■■ 4.78
LYSMD4-207ENST00000484050 EIF4G3O43432 1585 aaKnown RBP44.92■■■■■ 4.78
LYSMD4-207ENST00000484050 OSCARQ8IYS5 282 aa44.92■■■■■ 4.78
LYSMD4-207ENST00000484050 POLA1P09884 1462 aaPredicted RBP44.9■■■■■ 4.78
LYSMD4-207ENST00000484050 CUX1P39880 1505 aa44.75■■■■■ 4.75
LYSMD4-207ENST00000484050 AQRO60306 1485 aaKnown RBP eCLIP44.74■■■■■ 4.75
LYSMD4-207ENST00000484050 RAD54L2Q9Y4B4 1467 aa44.73■■■■■ 4.75
LYSMD4-207ENST00000484050 FGD5Q6ZNL6 1462 aa44.69■■■■■ 4.74
LYSMD4-207ENST00000484050 SOGA1O94964 1423 aa44.67■■■■■ 4.74
LYSMD4-207ENST00000484050 TRIM41Q8WV44 630 aa44.61■■■■■ 4.73
LYSMD4-207ENST00000484050 CHD1O14646 1710 aa44.53■■■■■ 4.72
LYSMD4-207ENST00000484050 TDRD9Q8NDG6 1382 aaKnown RBP44.53■■■■■ 4.72
LYSMD4-207ENST00000484050 WDR97A6NE52 1622 aa44.47■■■■■ 4.71
LYSMD4-207ENST00000484050 RIMBP3CA6NJZ7 1639 aa44.38■■■■■ 4.69
LYSMD4-207ENST00000484050 RIMBP3BA6NNM3 1639 aa44.38■■■■■ 4.69
LYSMD4-207ENST00000484050 RIMBP3Q9UFD9 1639 aa44.38■■■■■ 4.69
LYSMD4-207ENST00000484050 FBLN2P98095 1184 aa44.32■■■■■ 4.69
LYSMD4-207ENST00000484050 SNAPC4Q5SXM2 1469 aa44.31■■■■■ 4.68
LYSMD4-207ENST00000484050 ARHGEF11O15085 1522 aa44.25■■■■■ 4.67
LYSMD4-207ENST00000484050 GRIN2BQ13224 1484 aa44.24■■■■■ 4.67
LYSMD4-207ENST00000484050 ABCA10Q8WWZ4 1543 aa44.2■■■■■ 4.67
LYSMD4-207ENST00000484050 MAGI1Q96QZ7 1491 aaPredicted RBP44.2■■■■■ 4.67
LYSMD4-207ENST00000484050 PBRM1Q86U86 1689 aa44.19■■■■■ 4.67
LYSMD4-207ENST00000484050 BIVM-ERCC5R4GMW8 1640 aa44.18■■■■■ 4.66
LYSMD4-207ENST00000484050 GAPVD1Q14C86 1478 aa44.16■■■■■ 4.66
LYSMD4-207ENST00000484050 TOP2BQ02880 1626 aa44.16■■■■■ 4.66
LYSMD4-207ENST00000484050 WRNQ14191 1432 aaPredicted RBP eCLIP44.14■■■■■ 4.66
LYSMD4-207ENST00000484050 SYNJ1O43426 1573 aa44.14■■■■■ 4.66
LYSMD4-207ENST00000484050 ABCA5Q8WWZ7 1642 aa44.13■■■■■ 4.66
LYSMD4-207ENST00000484050 CHMP7Q8WUX9 453 aaPredicted RBP44.06■■■■■ 4.64
LYSMD4-207ENST00000484050 SYNJ2O15056 1496 aa44.05■■■■■ 4.64
LYSMD4-207ENST00000484050 CLASP1Q7Z460 1538 aa43.99■■■■■ 4.63
LYSMD4-207ENST00000484050 ARAP1Q96P48 1450 aa43.85■■■■■ 4.61
LYSMD4-207ENST00000484050 CYB5RLQ6IPT4 315 aa43.85■■■■■ 4.61
LYSMD4-207ENST00000484050 ADAMTS12P58397 1594 aa43.76■■■■■ 4.6
LYSMD4-207ENST00000484050 GRIN2AQ12879 1464 aa43.69■■■■■ 4.58
LYSMD4-207ENST00000484050 ERICH3Q5RHP9 1530 aa43.66■■■■■ 4.58
LYSMD4-207ENST00000484050 FHAD1B1AJZ9 1412 aa43.6■■■■■ 4.57
LYSMD4-207ENST00000484050 CEP170Q5SW79 1584 aa43.54■■■■■ 4.56
LYSMD4-207ENST00000484050 NUP160Q12769 1436 aa43.52■■■■■ 4.56
LYSMD4-207ENST00000484050 ERCC6L2Q5T890 1561 aa43.35■■■■■ 4.53
LYSMD4-207ENST00000484050 SHROOM2Q13796 1616 aa43.32■■■■■ 4.53
LYSMD4-207ENST00000484050 KIF27Q86VH2 1401 aa43.25■■■■■ 4.51
LYSMD4-207ENST00000484050 TRHP20396 242 aaPredicted RBP43.2■■■■■ 4.51
LYSMD4-207ENST00000484050 IGF1RP08069 1367 aa43.18■■■■■ 4.5
LYSMD4-207ENST00000484050 CUL7Q14999 1698 aa43.14■■■■■ 4.5
LYSMD4-207ENST00000484050 RUSC2Q8N2Y8 1516 aa43.14■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms