RNA–Protein interactions for RNA: ENST00000347147.8

TMEM44-202, Transcript of transmembrane protein 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM44, Length 2,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-202ENST00000347147 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
TMEM44-202ENST00000347147 CCDC180Q9P1Z9 1646 aa40.81■■■■■ 4.12
TMEM44-202ENST00000347147 SHROOM4Q9ULL8 1493 aa40.55■■■■■ 4.08
TMEM44-202ENST00000347147 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
TMEM44-202ENST00000347147 SUPT5HO00267 1087 aaKnown RBP39.83■■■■□ 3.97
TMEM44-202ENST00000347147 DCAF8L2P0C7V8 631 aa39.58■■■■□ 3.93
TMEM44-202ENST00000347147 DCAF1Q9Y4B6 1507 aa39.39■■■■□ 3.9
TMEM44-202ENST00000347147 CHIC1Q5VXU3 224 aa38.76■■■■□ 3.8
TMEM44-202ENST00000347147 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
TMEM44-202ENST00000347147 ABCC9O60706 1549 aa38.15■■■■□ 3.7
TMEM44-202ENST00000347147 SCRIBQ14160 1630 aa38.06■■■■□ 3.68
TMEM44-202ENST00000347147 RSF1Q96T23 1441 aaPredicted RBP37.81■■■■□ 3.64
TMEM44-202ENST00000347147 NACADO15069 1562 aa37.75■■■■□ 3.63
TMEM44-202ENST00000347147 LOC105371045A0A1W2PR82 267 aa37.52■■■■□ 3.6
TMEM44-202ENST00000347147 HRCP23327 699 aa37.49■■■■□ 3.59
TMEM44-202ENST00000347147 RB1CC1Q8TDY2 1594 aa37.45■■■■□ 3.59
TMEM44-202ENST00000347147 PCGF6Q9BYE7 350 aa37.45■■■■□ 3.59
TMEM44-202ENST00000347147 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
TMEM44-202ENST00000347147 TRIM41Q8WV44 630 aa37.21■■■■□ 3.55
TMEM44-202ENST00000347147 MROH2BQ7Z745 1585 aa37.13■■■■□ 3.53
TMEM44-202ENST00000347147 WIZO95785 1651 aa36.92■■■■□ 3.5
TMEM44-202ENST00000347147 TRIM26Q12899 539 aaPredicted RBP36.9■■■■□ 3.5
TMEM44-202ENST00000347147 BAZ1AQ9NRL2 1556 aaPredicted RBP36.8■■■■□ 3.48
TMEM44-202ENST00000347147 FAM9AQ8IZU1 332 aaPredicted RBP36.75■■■■□ 3.47
TMEM44-202ENST00000347147 PPARGC1BQ86YN6 1023 aaKnown RBP36.52■■■■□ 3.44
TMEM44-202ENST00000347147 UNC13AQ9UPW8 1703 aa36.45■■■■□ 3.42
TMEM44-202ENST00000347147 SMARCA4P51532 1647 aa36.45■■■■□ 3.42
TMEM44-202ENST00000347147 TOP2AP11388 1531 aaKnown RBP36.44■■■■□ 3.42
TMEM44-202ENST00000347147 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
TMEM44-202ENST00000347147 EHMT2Q96KQ7 1210 aa36.33■■■■□ 3.41
TMEM44-202ENST00000347147 CCDC88BA6NC98 1476 aa36.24■■■■□ 3.39
TMEM44-202ENST00000347147 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
TMEM44-202ENST00000347147 ZEB1P37275 1124 aaPredicted RBP36.19■■■■□ 3.38
TMEM44-202ENST00000347147 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
TMEM44-202ENST00000347147 BICRAQ9NZM4 1560 aa36■■■■□ 3.35
TMEM44-202ENST00000347147 PABPN1Q86U42 306 aaKnown RBP eCLIP35.98■■■■□ 3.35
TMEM44-202ENST00000347147 PEG3Q9GZU2 1588 aa35.81■■■■□ 3.32
TMEM44-202ENST00000347147 EEA1Q15075 1411 aa35.74■■■■□ 3.31
TMEM44-202ENST00000347147 SOGA1O94964 1423 aa35.71■■■■□ 3.31
TMEM44-202ENST00000347147 CSRNP3Q8WYN3 585 aa35.63■■■■□ 3.29
TMEM44-202ENST00000347147 TNIKQ9UKE5 1360 aa35.62■■■■□ 3.29
TMEM44-202ENST00000347147 WRNQ14191 1432 aaPredicted RBP eCLIP35.61■■■■□ 3.295e-6■■■■■ 29.2
TMEM44-202ENST00000347147 CEP162Q5TB80 1403 aa35.58■■■■□ 3.29
TMEM44-202ENST00000347147 ATAD2BQ9ULI0 1458 aa35.53■■■■□ 3.28
TMEM44-202ENST00000347147 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
TMEM44-202ENST00000347147 UBTFP17480 764 aaKnown RBP35.45■■■■□ 3.27
TMEM44-202ENST00000347147 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.26
TMEM44-202ENST00000347147 GOLGA3Q08378 1498 aa35.4■■■■□ 3.26
TMEM44-202ENST00000347147 SYNJ1O43426 1573 aa35.31■■■■□ 3.24
TMEM44-202ENST00000347147 CCER1Q8TC90 406 aaPredicted RBP35.3■■■■□ 3.24
TMEM44-202ENST00000347147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.29■■■■□ 3.24
TMEM44-202ENST00000347147 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
TMEM44-202ENST00000347147 KIF21BO75037 1637 aa35.17■■■■□ 3.22
TMEM44-202ENST00000347147 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
TMEM44-202ENST00000347147 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
TMEM44-202ENST00000347147 CLIP1P30622 1438 aa34.97■■■■□ 3.19
TMEM44-202ENST00000347147 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
TMEM44-202ENST00000347147 HMGXB3Q12766 1538 aa34.89■■■■□ 3.18
TMEM44-202ENST00000347147 RAPGEF2Q9Y4G8 1499 aa34.86■■■■□ 3.17
TMEM44-202ENST00000347147 BIVM-ERCC5R4GMW8 1640 aa34.85■■■■□ 3.17
TMEM44-202ENST00000347147 VPS8Q8N3P4 1428 aa34.82■■■■□ 3.16
TMEM44-202ENST00000347147 APLP2Q06481 763 aa34.75■■■■□ 3.15
TMEM44-202ENST00000347147 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
TMEM44-202ENST00000347147 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
TMEM44-202ENST00000347147 RANGAP1P46060 587 aaPredicted RBP34.59■■■■□ 3.13
TMEM44-202ENST00000347147 CUX1P39880 1505 aa34.59■■■■□ 3.13
TMEM44-202ENST00000347147 CFTRP13569 1480 aa34.58■■■■□ 3.13
TMEM44-202ENST00000347147 HNRNPUL2Q1KMD3 747 aaKnown RBP34.56■■■■□ 3.12
TMEM44-202ENST00000347147 DIEXFQ68CQ4 756 aaKnown RBP34.56■■■■□ 3.12
TMEM44-202ENST00000347147 KIF27Q86VH2 1401 aa34.51■■■■□ 3.12
TMEM44-202ENST00000347147 SCAF1Q9H7N4 1312 aaKnown RBP34.39■■■■□ 3.1
TMEM44-202ENST00000347147 ZNF316A6NFI3 1004 aaPredicted RBP34.38■■■■□ 3.09
TMEM44-202ENST00000347147 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
TMEM44-202ENST00000347147 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
TMEM44-202ENST00000347147 ACIN1Q9UKV3 1341 aaKnown RBP34.22■■■■□ 3.07
TMEM44-202ENST00000347147 CADPSQ9ULU8 1353 aa34.21■■■■□ 3.07
TMEM44-202ENST00000347147 CENPBP07199 599 aaPredicted RBP34.16■■■■□ 3.06
TMEM44-202ENST00000347147 KANK4Q5T7N3 995 aaPredicted RBP34.13■■■■□ 3.05
TMEM44-202ENST00000347147 CUX2O14529 1486 aa34.12■■■■□ 3.05
TMEM44-202ENST00000347147 IGF1RP08069 1367 aa34.09■■■■□ 3.05
TMEM44-202ENST00000347147 NEUROD1Q13562 356 aa34.09■■■■□ 3.05
TMEM44-202ENST00000347147 ARHGAP35Q9NRY4 1499 aa34.09■■■■□ 3.05
TMEM44-202ENST00000347147 CLSPNQ9HAW4 1339 aa34.05■■■■□ 3.04
TMEM44-202ENST00000347147 RRBP1Q9P2E9 1410 aaKnown RBP34.01■■■■□ 3.03
TMEM44-202ENST00000347147 FGD5Q6ZNL6 1462 aa33.99■■■■□ 3.03
TMEM44-202ENST00000347147 CARMIL1Q5VZK9 1371 aa33.96■■■■□ 3.03
TMEM44-202ENST00000347147 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
TMEM44-202ENST00000347147 DHX57Q6P158 1386 aaKnown RBP33.92■■■■□ 3.02
TMEM44-202ENST00000347147 CCNB3Q8WWL7 1395 aa33.87■■■■□ 3.01
TMEM44-202ENST00000347147 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
TMEM44-202ENST00000347147 PELP1Q8IZL8 1130 aaKnown RBP33.85■■■■□ 3.01
TMEM44-202ENST00000347147 MAP3K1Q13233 1512 aa33.81■■■■□ 3
TMEM44-202ENST00000347147 MIER1Q8N108 512 aa33.77■■■■□ 3
TMEM44-202ENST00000347147 GTF3C3Q9Y5Q9 886 aa33.77■■■■□ 3
TMEM44-202ENST00000347147 TIAM1Q13009 1591 aa33.74■■■□□ 2.99
TMEM44-202ENST00000347147 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
TMEM44-202ENST00000347147 FHAD1B1AJZ9 1412 aa33.69■■■□□ 2.98
TMEM44-202ENST00000347147 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
TMEM44-202ENST00000347147 ITGAEP38570 1179 aa33.64■■■□□ 2.98
TMEM44-202ENST00000347147 LRRC9Q6ZRR7 1453 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms