RNA–Protein interactions for RNA: ENST00000372257.6

ERI3-201, Transcript of ERI1 exoribonuclease family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERI3, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-201ENST00000372257 NISCHQ9Y2I1 1504 aa52.33■■■■■ 5.97
ERI3-201ENST00000372257 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
ERI3-201ENST00000372257 ABCC9O60706 1549 aa44.8■■■■■ 4.76
ERI3-201ENST00000372257 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
ERI3-201ENST00000372257 DCAF8L2P0C7V8 631 aa43.65■■■■■ 4.58
ERI3-201ENST00000372257 NACADO15069 1562 aa43.31■■■■■ 4.52
ERI3-201ENST00000372257 RB1CC1Q8TDY2 1594 aa43.23■■■■■ 4.51
ERI3-201ENST00000372257 DCAF1Q9Y4B6 1507 aa43.23■■■■■ 4.51
ERI3-201ENST00000372257 MYO15BQ96JP2 1530 aa43.18■■■■■ 4.5
ERI3-201ENST00000372257 SCRIBQ14160 1630 aa42.33■■■■■ 4.37
ERI3-201ENST00000372257 UNC13AQ9UPW8 1703 aa42.28■■■■■ 4.36
ERI3-201ENST00000372257 PABPN1Q86U42 306 aaKnown RBP eCLIP42.03■■■■■ 4.32
ERI3-201ENST00000372257 BICRAQ9NZM4 1560 aa41.95■■■■■ 4.31
ERI3-201ENST00000372257 SHROOM4Q9ULL8 1493 aa41.87■■■■■ 4.29
ERI3-201ENST00000372257 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
ERI3-201ENST00000372257 CECR2Q9BXF3 1484 aa40.78■■■■■ 4.12
ERI3-201ENST00000372257 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.1
ERI3-201ENST00000372257 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
ERI3-201ENST00000372257 CC2D2AQ9P2K1 1620 aa40.49■■■■■ 4.07
ERI3-201ENST00000372257 SMARCA4P51532 1647 aa40.48■■■■■ 4.07
ERI3-201ENST00000372257 MROH2BQ7Z745 1585 aa40.39■■■■■ 4.06
ERI3-201ENST00000372257 RSF1Q96T23 1441 aaPredicted RBP40.13■■■■■ 4.01
ERI3-201ENST00000372257 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
ERI3-201ENST00000372257 SMARCA2P51531 1590 aa40.06■■■■■ 4
ERI3-201ENST00000372257 PEG3Q9GZU2 1588 aa40.02■■■■■ 4
ERI3-201ENST00000372257 WIZO95785 1651 aa39.99■■■■□ 3.99
ERI3-201ENST00000372257 NCAPD3P42695 1498 aa39.97■■■■□ 3.99
ERI3-201ENST00000372257 BAZ1BQ9UIG0 1483 aaKnown RBP39.83■■■■□ 3.97
ERI3-201ENST00000372257 HMGXB3Q12766 1538 aa39.81■■■■□ 3.96
ERI3-201ENST00000372257 SUPT5HO00267 1087 aaKnown RBP39.67■■■■□ 3.94
ERI3-201ENST00000372257 TOP2AP11388 1531 aaKnown RBP39.53■■■■□ 3.92
ERI3-201ENST00000372257 CCDC88BA6NC98 1476 aa39.12■■■■□ 3.85
ERI3-201ENST00000372257 NESP48681 1621 aa38.95■■■■□ 3.83
ERI3-201ENST00000372257 CADPSQ9ULU8 1353 aa38.88■■■■□ 3.82
ERI3-201ENST00000372257 LAMC3Q9Y6N6 1575 aa38.81■■■■□ 3.8
ERI3-201ENST00000372257 CFTRP13569 1480 aa38.76■■■■□ 3.8
ERI3-201ENST00000372257 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.76
ERI3-201ENST00000372257 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
ERI3-201ENST00000372257 FANCD2Q9BXW9 1451 aa38.45■■■■□ 3.75
ERI3-201ENST00000372257 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
ERI3-201ENST00000372257 PRDM2Q13029 1718 aa38.44■■■■□ 3.74
ERI3-201ENST00000372257 CEP164Q9UPV0 1460 aa38.33■■■■□ 3.73
ERI3-201ENST00000372257 MRC2Q9UBG0 1479 aa38.14■■■■□ 3.7
ERI3-201ENST00000372257 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
ERI3-201ENST00000372257 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
ERI3-201ENST00000372257 WDR62O43379 1518 aa37.98■■■■□ 3.67
ERI3-201ENST00000372257 ABCC8Q09428 1581 aa37.92■■■■□ 3.66
ERI3-201ENST00000372257 TOPBP1Q92547 1522 aa37.9■■■■□ 3.66
ERI3-201ENST00000372257 DNMBPQ6XZF7 1577 aa37.87■■■■□ 3.65
ERI3-201ENST00000372257 CUX1P39880 1505 aa37.85■■■■□ 3.65
ERI3-201ENST00000372257 CUX2O14529 1486 aa37.83■■■■□ 3.65
ERI3-201ENST00000372257 WRNQ14191 1432 aaPredicted RBP eCLIP37.81■■■■□ 3.64
ERI3-201ENST00000372257 SYNJ1O43426 1573 aa37.7■■■■□ 3.63
ERI3-201ENST00000372257 TOP2BQ02880 1626 aa37.63■■■■□ 3.61
ERI3-201ENST00000372257 POLA1P09884 1462 aaPredicted RBP37.62■■■■□ 3.61
ERI3-201ENST00000372257 FGD5Q6ZNL6 1462 aa37.62■■■■□ 3.61
ERI3-201ENST00000372257 BIVM-ERCC5R4GMW8 1640 aa37.6■■■■□ 3.61
ERI3-201ENST00000372257 RAD54L2Q9Y4B4 1467 aa37.5■■■■□ 3.59
ERI3-201ENST00000372257 SOGA1O94964 1423 aa37.49■■■■□ 3.59
ERI3-201ENST00000372257 IFT140Q96RY7 1462 aa37.48■■■■□ 3.59
ERI3-201ENST00000372257 TARBP1Q13395 1621 aaKnown RBP37.41■■■■□ 3.58
ERI3-201ENST00000372257 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
ERI3-201ENST00000372257 ZNF608Q9ULD9 1512 aaPredicted RBP37.34■■■■□ 3.57
ERI3-201ENST00000372257 CHIC1Q5VXU3 224 aa37.31■■■■□ 3.56
ERI3-201ENST00000372257 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
ERI3-201ENST00000372257 ABCA10Q8WWZ4 1543 aa37.25■■■■□ 3.55
ERI3-201ENST00000372257 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
ERI3-201ENST00000372257 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.552e-6■■■■□ 24.5
ERI3-201ENST00000372257 EIF4G3O43432 1585 aaKnown RBP37.18■■■■□ 3.54
ERI3-201ENST00000372257 GAPVD1Q14C86 1478 aa37.05■■■■□ 3.52
ERI3-201ENST00000372257 ABCA5Q8WWZ7 1642 aa37.04■■■■□ 3.52
ERI3-201ENST00000372257 KIF27Q86VH2 1401 aa36.96■■■■□ 3.51
ERI3-201ENST00000372257 GRIN2BQ13224 1484 aa36.95■■■■□ 3.5
ERI3-201ENST00000372257 PBRM1Q86U86 1689 aa36.9■■■■□ 3.5
ERI3-201ENST00000372257 RUSC2Q8N2Y8 1516 aa36.89■■■■□ 3.5
ERI3-201ENST00000372257 SNAPC4Q5SXM2 1469 aa36.86■■■■□ 3.49
ERI3-201ENST00000372257 ERICH3Q5RHP9 1530 aa36.79■■■■□ 3.48
ERI3-201ENST00000372257 MAGI1Q96QZ7 1491 aaPredicted RBP36.77■■■■□ 3.48
ERI3-201ENST00000372257 IGF1RP08069 1367 aa36.77■■■■□ 3.48
ERI3-201ENST00000372257 FBLN2P98095 1184 aa36.71■■■■□ 3.47
ERI3-201ENST00000372257 FAM9AQ8IZU1 332 aaPredicted RBP36.68■■■■□ 3.46
ERI3-201ENST00000372257 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
ERI3-201ENST00000372257 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
ERI3-201ENST00000372257 SYNJ2O15056 1496 aa36.64■■■■□ 3.46
ERI3-201ENST00000372257 FHAD1B1AJZ9 1412 aa36.63■■■■□ 3.45
ERI3-201ENST00000372257 CHD1O14646 1710 aa36.59■■■■□ 3.45
ERI3-201ENST00000372257 EEA1Q15075 1411 aa36.59■■■■□ 3.45
ERI3-201ENST00000372257 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
ERI3-201ENST00000372257 CUL7Q14999 1698 aa36.56■■■■□ 3.44
ERI3-201ENST00000372257 CSRNP3Q8WYN3 585 aa36.54■■■■□ 3.44
ERI3-201ENST00000372257 GRIN2AQ12879 1464 aa36.49■■■■□ 3.43
ERI3-201ENST00000372257 OSCARQ8IYS5 282 aa36.45■■■■□ 3.43
ERI3-201ENST00000372257 PRXQ9BXM0 1461 aa36.4■■■■□ 3.42
ERI3-201ENST00000372257 RAPGEF2Q9Y4G8 1499 aa36.39■■■■□ 3.42
ERI3-201ENST00000372257 CEP170Q5SW79 1584 aa36.29■■■■□ 3.4
ERI3-201ENST00000372257 NUP160Q12769 1436 aa36.28■■■■□ 3.4
ERI3-201ENST00000372257 EHMT2Q96KQ7 1210 aa36.24■■■■□ 3.39
ERI3-201ENST00000372257 KIF21BO75037 1637 aa36.19■■■■□ 3.38
ERI3-201ENST00000372257 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
ERI3-201ENST00000372257 KIAA0586Q9BVV6 1533 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms