RNA–Protein interactions for RNA: ENST00000509446.5

APBB2-217, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

TSL 2

Gene APBB2, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-217ENST00000509446 NISCHQ9Y2I1 1504 aa48.63■■■■■ 5.37
APBB2-217ENST00000509446 CCDC180Q9P1Z9 1646 aa43.2■■■■■ 4.51
APBB2-217ENST00000509446 ABCC9O60706 1549 aa42.54■■■■■ 4.4
APBB2-217ENST00000509446 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
APBB2-217ENST00000509446 RB1CC1Q8TDY2 1594 aa40.75■■■■■ 4.11
APBB2-217ENST00000509446 NACADO15069 1562 aa40.65■■■■■ 4.1
APBB2-217ENST00000509446 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
APBB2-217ENST00000509446 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
APBB2-217ENST00000509446 DCAF1Q9Y4B6 1507 aa40.12■■■■■ 4.01
APBB2-217ENST00000509446 UNC13AQ9UPW8 1703 aa39.91■■■■□ 3.98
APBB2-217ENST00000509446 PABPN1Q86U42 306 aaKnown RBP eCLIP39.79■■■■□ 3.96
APBB2-217ENST00000509446 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
APBB2-217ENST00000509446 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.92
APBB2-217ENST00000509446 DNAJC5BQ9UF47 199 aa39.16■■■■□ 3.86
APBB2-217ENST00000509446 SHROOM4Q9ULL8 1493 aa38.96■■■■□ 3.83
APBB2-217ENST00000509446 EIF4G1Q04637 1599 aaKnown RBP38.53■■■■□ 3.76
APBB2-217ENST00000509446 CC2D2AQ9P2K1 1620 aa38.42■■■■□ 3.74
APBB2-217ENST00000509446 CECR2Q9BXF3 1484 aa38.17■■■■□ 3.7
APBB2-217ENST00000509446 SMARCA4P51532 1647 aa37.76■■■■□ 3.64
APBB2-217ENST00000509446 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
APBB2-217ENST00000509446 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
APBB2-217ENST00000509446 MROH2BQ7Z745 1585 aa37.54■■■■□ 3.6
APBB2-217ENST00000509446 NCAPD3P42695 1498 aa37.52■■■■□ 3.6
APBB2-217ENST00000509446 SMARCA2P51531 1590 aa37.48■■■■□ 3.59
APBB2-217ENST00000509446 HMGXB3Q12766 1538 aa37.31■■■■□ 3.56
APBB2-217ENST00000509446 PEG3Q9GZU2 1588 aa37.31■■■■□ 3.56
APBB2-217ENST00000509446 BAZ1BQ9UIG0 1483 aaKnown RBP37.27■■■■□ 3.56
APBB2-217ENST00000509446 WIZO95785 1651 aa37.15■■■■□ 3.54
APBB2-217ENST00000509446 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
APBB2-217ENST00000509446 NESP48681 1621 aa36.8■■■■□ 3.48
APBB2-217ENST00000509446 TOP2AP11388 1531 aaKnown RBP36.67■■■■□ 3.46
APBB2-217ENST00000509446 ERCC6Q03468 1493 aa36.63■■■■□ 3.45
APBB2-217ENST00000509446 LAMC3Q9Y6N6 1575 aa36.55■■■■□ 3.44
APBB2-217ENST00000509446 CADPSQ9ULU8 1353 aa36.46■■■■□ 3.43
APBB2-217ENST00000509446 PDS5BQ9NTI5 1447 aa36.33■■■■□ 3.41
APBB2-217ENST00000509446 KIF21AQ7Z4S6 1674 aa36.32■■■■□ 3.41
APBB2-217ENST00000509446 CCDC88BA6NC98 1476 aa36.29■■■■□ 3.4
APBB2-217ENST00000509446 CFTRP13569 1480 aa36.21■■■■□ 3.39
APBB2-217ENST00000509446 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
APBB2-217ENST00000509446 CUX2O14529 1486 aa36.18■■■■□ 3.38
APBB2-217ENST00000509446 THOC2Q8NI27 1593 aaKnown RBP36.17■■■■□ 3.38
APBB2-217ENST00000509446 FANCD2Q9BXW9 1451 aa36.07■■■■□ 3.37
APBB2-217ENST00000509446 CEP164Q9UPV0 1460 aa36.03■■■■□ 3.36
APBB2-217ENST00000509446 MRC2Q9UBG0 1479 aa35.99■■■■□ 3.35
APBB2-217ENST00000509446 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
APBB2-217ENST00000509446 WDR62O43379 1518 aa35.85■■■■□ 3.33
APBB2-217ENST00000509446 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
APBB2-217ENST00000509446 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
APBB2-217ENST00000509446 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
APBB2-217ENST00000509446 ABCC8Q09428 1581 aa35.38■■■■□ 3.25
APBB2-217ENST00000509446 IFT140Q96RY7 1462 aa35.24■■■■□ 3.23
APBB2-217ENST00000509446 DNAJC5Q9H3Z4 198 aa35.24■■■■□ 3.23
APBB2-217ENST00000509446 CUX1P39880 1505 aa35.22■■■■□ 3.23
APBB2-217ENST00000509446 ZNF608Q9ULD9 1512 aaPredicted RBP35.19■■■■□ 3.22
APBB2-217ENST00000509446 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
APBB2-217ENST00000509446 TARBP1Q13395 1621 aaKnown RBP35.1■■■■□ 3.21
APBB2-217ENST00000509446 FGD5Q6ZNL6 1462 aa35.1■■■■□ 3.21
APBB2-217ENST00000509446 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
APBB2-217ENST00000509446 SOGA1O94964 1423 aa35.05■■■■□ 3.2
APBB2-217ENST00000509446 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
APBB2-217ENST00000509446 AQRO60306 1485 aaKnown RBP eCLIP34.98■■■■□ 3.19
APBB2-217ENST00000509446 WRNQ14191 1432 aaPredicted RBP eCLIP34.92■■■■□ 3.18
APBB2-217ENST00000509446 TDRD9Q8NDG6 1382 aaKnown RBP34.91■■■■□ 3.18
APBB2-217ENST00000509446 SYNJ1O43426 1573 aa34.89■■■■□ 3.18
APBB2-217ENST00000509446 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
APBB2-217ENST00000509446 BIVM-ERCC5R4GMW8 1640 aa34.83■■■■□ 3.17
APBB2-217ENST00000509446 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
APBB2-217ENST00000509446 OSCARQ8IYS5 282 aa34.73■■■■□ 3.15
APBB2-217ENST00000509446 ABCA10Q8WWZ4 1543 aa34.7■■■■□ 3.14
APBB2-217ENST00000509446 FBLN2P98095 1184 aa34.64■■■■□ 3.14
APBB2-217ENST00000509446 SNAPC4Q5SXM2 1469 aa34.64■■■■□ 3.14
APBB2-217ENST00000509446 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
APBB2-217ENST00000509446 CHD1O14646 1710 aa34.61■■■■□ 3.13
APBB2-217ENST00000509446 GRIN2BQ13224 1484 aa34.61■■■■□ 3.13
APBB2-217ENST00000509446 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
APBB2-217ENST00000509446 PBRM1Q86U86 1689 aa34.58■■■■□ 3.13
APBB2-217ENST00000509446 MAGI1Q96QZ7 1491 aaPredicted RBP34.49■■■■□ 3.11
APBB2-217ENST00000509446 CHMP7Q8WUX9 453 aaPredicted RBP34.45■■■■□ 3.11
APBB2-217ENST00000509446 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
APBB2-217ENST00000509446 ADAMTS12P58397 1594 aa34.28■■■■□ 3.08
APBB2-217ENST00000509446 ERICH3Q5RHP9 1530 aa34.26■■■■□ 3.08
APBB2-217ENST00000509446 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
APBB2-217ENST00000509446 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
APBB2-217ENST00000509446 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
APBB2-217ENST00000509446 TRIM41Q8WV44 630 aa34.2■■■■□ 3.07
APBB2-217ENST00000509446 FHAD1B1AJZ9 1412 aa34.2■■■■□ 3.06
APBB2-217ENST00000509446 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
APBB2-217ENST00000509446 GRIN2AQ12879 1464 aa34.18■■■■□ 3.06
APBB2-217ENST00000509446 ARHGEF11O15085 1522 aa34.18■■■■□ 3.06
APBB2-217ENST00000509446 CLASP1Q7Z460 1538 aa34.17■■■■□ 3.06
APBB2-217ENST00000509446 IGF1RP08069 1367 aa34.09■■■■□ 3.05
APBB2-217ENST00000509446 CEP170Q5SW79 1584 aa34.05■■■■□ 3.04
APBB2-217ENST00000509446 NUP160Q12769 1436 aa34■■■■□ 3.03
APBB2-217ENST00000509446 RUSC2Q8N2Y8 1516 aa33.97■■■■□ 3.03
APBB2-217ENST00000509446 CUL7Q14999 1698 aa33.94■■■■□ 3.02
APBB2-217ENST00000509446 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
APBB2-217ENST00000509446 ARAP1Q96P48 1450 aa33.91■■■■□ 3.02
APBB2-217ENST00000509446 CARMIL1Q5VZK9 1371 aa33.88■■■■□ 3.01
APBB2-217ENST00000509446 ERCC6L2Q5T890 1561 aa33.8■■■■□ 3
APBB2-217ENST00000509446 SHROOM2Q13796 1616 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms