Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.47■□□□□ 0.712e-8■■■■□ 20.8
CSTF2TQ9H0L4 RAB35-204ENST00000540803 551 ntTSL 217.94■□□□□ 0.461e-6■■■■□ 20.8
CSTF2TQ9H0L4 PTMA-207ENST00000440384 222 ntTSL 317.9■□□□□ 0.462e-7■■■■□ 20.8
CSTF2TQ9H0L4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.21e-6■■■■□ 20.8
CSTF2TQ9H0L4 ATP2A3-212ENST00000572694 894 ntTSL 216.11■□□□□ 0.171e-6■■■■□ 20.8
CSTF2TQ9H0L4 SHC2-206ENST00000590222 951 ntTSL 515.98■□□□□ 0.157e-7■■■■□ 20.8
CSTF2TQ9H0L4 PPIF-204ENST00000492149 646 ntTSL 215.95■□□□□ 0.141e-6■■■■□ 20.8
CSTF2TQ9H0L4 RGL2-239ENST00000460988 754 ntTSL 314.87□□□□□ -0.031e-6■■■■□ 20.8
CSTF2TQ9H0L4 IL18BP-203ENST00000343898 1720 ntTSL 1 (best)14.83□□□□□ -0.031e-6■■■■□ 20.8
CSTF2TQ9H0L4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.82□□□□□ -0.041e-6■■■■□ 20.8
CSTF2TQ9H0L4 RAB35-203ENST00000538903 643 ntTSL 313.64□□□□□ -0.231e-6■■■■□ 20.8
CSTF2TQ9H0L4 MECP2-211ENST00000496908 342 ntTSL 1 (best)13.04□□□□□ -0.321e-6■■■■□ 20.8
CSTF2TQ9H0L4 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.362e-8■■■■□ 20.8
CSTF2TQ9H0L4 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.641e-6■■■■□ 20.8
CSTF2TQ9H0L4 MECP2-204ENST00000415944 413 ntTSL 57.99□□□□□ -1.131e-6■■■■□ 20.8
CSTF2TQ9H0L4 MECP2-222ENST00000637533 140 ntTSL 51.99□□□□□ -2.091e-6■■■■□ 20.8
CSTF2TQ9H0L4 AGRN-206ENST00000477585 707 ntTSL 322.68■■□□□ 1.227e-9■■■■□ 20.8
CSTF2TQ9H0L4 PUM2-206ENST00000424110 546 ntTSL 413.16□□□□□ -0.33e-11■■■■□ 20.8
CSTF2TQ9H0L4 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.733e-11■■■■□ 20.8
CSTF2TQ9H0L4 MCF2L-227ENST00000486806 361 ntTSL 38.73□□□□□ -1.011e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNK2-210ENST00000433111 580 ntTSL 421.46■■□□□ 1.038e-7■■■■□ 20.8
CSTF2TQ9H0L4 CD81-216ENST00000531840 5235 ntTSL 1 (best)16.94■□□□□ 0.32e-6■■■■□ 20.8
CSTF2TQ9H0L4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.76■■□□□ 1.393e-7■■■■□ 20.8
CSTF2TQ9H0L4 VWA1-202ENST00000471398 458 ntTSL 316.82■□□□□ 0.283e-7■■■■□ 20.8
CSTF2TQ9H0L4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.163e-7■■■■□ 20.8
CSTF2TQ9H0L4 VWA1-204ENST00000495558 819 ntTSL 214.27□□□□□ -0.133e-7■■■■□ 20.8
CSTF2TQ9H0L4 CTBP2-207ENST00000467395 410 ntTSL 322.8■■□□□ 1.241e-6■■■■□ 20.8
CSTF2TQ9H0L4 MAEA-206ENST00000503693 1182 ntTSL 1 (best)18.2■□□□□ 0.51e-6■■■■□ 20.8
CSTF2TQ9H0L4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.83■□□□□ 0.123e-7■■■■□ 20.8
CSTF2TQ9H0L4 SLCO4A1-AS1-201ENST00000411824 809 ntTSL 213.99□□□□□ -0.173e-7■■■■□ 20.8
CSTF2TQ9H0L4 SLCO4A1-AS1-203ENST00000451648 649 ntTSL 211.1□□□□□ -0.633e-7■■■■□ 20.8
CSTF2TQ9H0L4 C9orf3-216ENST00000478603 802 ntTSL 221.56■■□□□ 1.042e-7■■■■□ 20.8
CSTF2TQ9H0L4 C9orf3-209ENST00000460573 443 ntTSL 520.76■□□□□ 0.912e-7■■■■□ 20.8
CSTF2TQ9H0L4 C9orf3-204ENST00000424143 1605 ntTSL 214.37□□□□□ -0.112e-7■■■■□ 20.8
CSTF2TQ9H0L4 C9orf3-217ENST00000479161 942 ntTSL 514.37□□□□□ -0.112e-7■■■■□ 20.8
CSTF2TQ9H0L4 C9orf3-210ENST00000462125 961 ntTSL 312.4□□□□□ -0.422e-7■■■■□ 20.8
CSTF2TQ9H0L4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.327e-8■■■■□ 20.8
CSTF2TQ9H0L4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.154e-7■■■■□ 20.8
CSTF2TQ9H0L4 RELT-205ENST00000544075 744 ntTSL 320.68■□□□□ 0.91e-6■■■■□ 20.8
CSTF2TQ9H0L4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.621e-6■■■■□ 20.8
CSTF2TQ9H0L4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.031e-6■■■■□ 20.8
CSTF2TQ9H0L4 CXXC5-210ENST00000509238 542 ntTSL 215.44■□□□□ 0.066e-7■■■■□ 20.8
CSTF2TQ9H0L4 GUK1-218ENST00000469973 795 ntTSL 224.22■■□□□ 1.478e-9■■■■□ 20.8
CSTF2TQ9H0L4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.58□□□□□ -1.362e-10■■■■□ 20.8
CSTF2TQ9H0L4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.422e-10■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.42e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.42e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.592e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC10.63□□□□□ -0.712e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC9.45□□□□□ -0.92e-6■■■■□ 20.8
CSTF2TQ9H0L4 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.992e-6■■■■□ 20.8
CSTF2TQ9H0L4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.8■■□□□ 1.244e-7■■■■□ 20.8
CSTF2TQ9H0L4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.354e-7■■■■□ 20.8
CSTF2TQ9H0L4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.148e-7■■■■□ 20.8
CSTF2TQ9H0L4 PRR5-ARHGAP8-204ENST00000515632 1590 ntTSL 213.31□□□□□ -0.283e-7■■■■□ 20.8
CSTF2TQ9H0L4 CARHSP1-211ENST00000568117 521 ntTSL 313.3□□□□□ -0.288e-7■■■■□ 20.8
CSTF2TQ9H0L4 PRR5-ARHGAP8-203ENST00000495250 1271 ntTSL 212.94□□□□□ -0.343e-7■■■■□ 20.8
CSTF2TQ9H0L4 TMEM161B-213ENST00000514135 2035 ntTSL 2 BASIC10.33□□□□□ -0.763e-6■■■■□ 20.8
CSTF2TQ9H0L4 RPL22L1-201ENST00000295830 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.883e-6■■■■□ 20.8
CSTF2TQ9H0L4 TMEM161B-209ENST00000511087 2804 ntTSL 1 (best)7.88□□□□□ -1.153e-6■■■■□ 20.8
CSTF2TQ9H0L4 RPL22L1-205ENST00000478578 900 ntTSL 27.78□□□□□ -1.163e-6■■■■□ 20.8
CSTF2TQ9H0L4 CHD6-205ENST00000440697 1635 ntTSL 57.53□□□□□ -1.23e-6■■■■□ 20.8
CSTF2TQ9H0L4 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.53□□□□□ -1.23e-6■■■■□ 20.8
CSTF2TQ9H0L4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.48e-7■■■■□ 20.8
CSTF2TQ9H0L4 CHD6-206ENST00000470470 1349 ntTSL 56.26□□□□□ -1.413e-6■■■■□ 20.8
CSTF2TQ9H0L4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.83□□□□□ -1.488e-7■■■■□ 20.8
CSTF2TQ9H0L4 TMEM161B-208ENST00000510089 7608 ntTSL 1 (best)3.24□□□□□ -1.893e-6■■■■□ 20.8
CSTF2TQ9H0L4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.75e-7■■■■□ 20.8
CSTF2TQ9H0L4 CD81-210ENST00000493525 396 ntTSL 514.2□□□□□ -0.141e-6■■■■□ 20.8
CSTF2TQ9H0L4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.641e-8■■■■□ 20.8
CSTF2TQ9H0L4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.69■□□□□ 0.261e-8■■■■□ 20.8
CSTF2TQ9H0L4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.55□□□□□ -0.241e-8■■■■□ 20.8
CSTF2TQ9H0L4 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.48□□□□□ -0.411e-8■■■■□ 20.8
CSTF2TQ9H0L4 SLC1A5-204ENST00000593713 774 ntTSL 310.4□□□□□ -0.741e-8■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-207ENST00000504701 567 ntTSL 421.35■■□□□ 1.017e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.587e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-209ENST00000506419 458 ntTSL 313.56□□□□□ -0.247e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.347e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.227e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.517e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-211ENST00000511432 286 ntTSL 54.89□□□□□ -1.637e-7■■■■□ 20.8
CSTF2TQ9H0L4 CDC42SE2-205ENST00000502840 539 ntTSL 44.35□□□□□ -1.717e-7■■■■□ 20.8
CSTF2TQ9H0L4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.47□□□□□ -0.256e-7■■■■□ 20.8
CSTF2TQ9H0L4 BBC3-205ENST00000598636 900 ntTSL 222.2■■□□□ 1.141e-9■■■■□ 20.8
CSTF2TQ9H0L4 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.497e-8■■■■□ 20.8
CSTF2TQ9H0L4 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.93□□□□□ -0.57e-8■■■■□ 20.8
CSTF2TQ9H0L4 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.547e-8■■■■□ 20.8
CSTF2TQ9H0L4 TBL1X-204ENST00000415293 565 ntTSL 56.21□□□□□ -1.427e-8■■■■□ 20.8
CSTF2TQ9H0L4 TBL1X-207ENST00000441088 520 ntTSL 36.21□□□□□ -1.427e-8■■■■□ 20.8
CSTF2TQ9H0L4 FUBP3-203ENST00000467100 2228 ntTSL 221.44■■□□□ 1.028e-10■■■■□ 20.8
CSTF2TQ9H0L4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.568e-10■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-221ENST00000477707 581 ntTSL 419.75■□□□□ 0.754e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-224ENST00000488044 672 ntTSL 414.82□□□□□ -0.044e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-220ENST00000475027 599 ntTSL 511.54□□□□□ -0.564e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-210ENST00000454318 581 ntTSL 311.36□□□□□ -0.594e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC10.94□□□□□ -0.664e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-225ENST00000488979 541 ntTSL 59.37□□□□□ -0.911e-9■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.96□□□□□ -0.984e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-215ENST00000468321 2739 ntTSL 1 (best)7.62□□□□□ -1.194e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-214ENST00000465733 551 ntTSL 47.46□□□□□ -1.224e-8■■■■□ 20.8
Retrieved 100 of 19,151 protein–RNA pairs in 146.4 ms