RNA–Protein interactions for RNA: ENST00000468321.5

SH3YL1-215, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 1 (best)

Gene SH3YL1, Length 2,739 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-215ENST00000468321 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
SH3YL1-215ENST00000468321 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
SH3YL1-215ENST00000468321 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
SH3YL1-215ENST00000468321 ABCC9O60706 1549 aa15.22■□□□□ 0.03
SH3YL1-215ENST00000468321 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
SH3YL1-215ENST00000468321 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
SH3YL1-215ENST00000468321 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
SH3YL1-215ENST00000468321 NACADO15069 1562 aa14.75□□□□□ -0.05
SH3YL1-215ENST00000468321 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
SH3YL1-215ENST00000468321 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
SH3YL1-215ENST00000468321 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
SH3YL1-215ENST00000468321 UNC13AQ9UPW8 1703 aa14.57□□□□□ -0.08
SH3YL1-215ENST00000468321 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SH3YL1-215ENST00000468321 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
SH3YL1-215ENST00000468321 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
SH3YL1-215ENST00000468321 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
SH3YL1-215ENST00000468321 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
SH3YL1-215ENST00000468321 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
SH3YL1-215ENST00000468321 WIZO95785 1651 aa14.03□□□□□ -0.16
SH3YL1-215ENST00000468321 SMARCA4P51532 1647 aa14.02□□□□□ -0.17
SH3YL1-215ENST00000468321 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
SH3YL1-215ENST00000468321 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
SH3YL1-215ENST00000468321 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
SH3YL1-215ENST00000468321 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.2
SH3YL1-215ENST00000468321 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
SH3YL1-215ENST00000468321 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
SH3YL1-215ENST00000468321 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
SH3YL1-215ENST00000468321 BAZ1BQ9UIG0 1483 aaKnown RBP13.7□□□□□ -0.22
SH3YL1-215ENST00000468321 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
SH3YL1-215ENST00000468321 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
SH3YL1-215ENST00000468321 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
SH3YL1-215ENST00000468321 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
SH3YL1-215ENST00000468321 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
SH3YL1-215ENST00000468321 HRCP23327 699 aa13.52□□□□□ -0.24
SH3YL1-215ENST00000468321 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.24
SH3YL1-215ENST00000468321 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
SH3YL1-215ENST00000468321 NESP48681 1621 aa13.36□□□□□ -0.27
SH3YL1-215ENST00000468321 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
SH3YL1-215ENST00000468321 CFTRP13569 1480 aa13.32□□□□□ -0.28
SH3YL1-215ENST00000468321 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
SH3YL1-215ENST00000468321 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
SH3YL1-215ENST00000468321 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
SH3YL1-215ENST00000468321 SYNJ1O43426 1573 aa13.27□□□□□ -0.28
SH3YL1-215ENST00000468321 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
SH3YL1-215ENST00000468321 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
SH3YL1-215ENST00000468321 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
SH3YL1-215ENST00000468321 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
SH3YL1-215ENST00000468321 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
SH3YL1-215ENST00000468321 CUX1P39880 1505 aa13.18□□□□□ -0.3
SH3YL1-215ENST00000468321 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
SH3YL1-215ENST00000468321 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
SH3YL1-215ENST00000468321 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
SH3YL1-215ENST00000468321 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
SH3YL1-215ENST00000468321 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
SH3YL1-215ENST00000468321 SOGA1O94964 1423 aa13.11□□□□□ -0.31
SH3YL1-215ENST00000468321 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
SH3YL1-215ENST00000468321 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
SH3YL1-215ENST00000468321 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
SH3YL1-215ENST00000468321 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
SH3YL1-215ENST00000468321 TRIM26Q12899 539 aaPredicted RBP13.04□□□□□ -0.32
SH3YL1-215ENST00000468321 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
SH3YL1-215ENST00000468321 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
SH3YL1-215ENST00000468321 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
SH3YL1-215ENST00000468321 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SH3YL1-215ENST00000468321 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
SH3YL1-215ENST00000468321 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
SH3YL1-215ENST00000468321 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
SH3YL1-215ENST00000468321 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
SH3YL1-215ENST00000468321 CUX2O14529 1486 aa12.93□□□□□ -0.34
SH3YL1-215ENST00000468321 WDR97A6NE52 1622 aa12.91□□□□□ -0.34
SH3YL1-215ENST00000468321 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
SH3YL1-215ENST00000468321 WDR62O43379 1518 aa12.9□□□□□ -0.34
SH3YL1-215ENST00000468321 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
SH3YL1-215ENST00000468321 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
SH3YL1-215ENST00000468321 EEA1Q15075 1411 aa12.86□□□□□ -0.35
SH3YL1-215ENST00000468321 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
SH3YL1-215ENST00000468321 ABCA10Q8WWZ4 1543 aa12.85□□□□□ -0.35
SH3YL1-215ENST00000468321 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
SH3YL1-215ENST00000468321 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
SH3YL1-215ENST00000468321 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
SH3YL1-215ENST00000468321 KIF21BO75037 1637 aa12.82□□□□□ -0.36
SH3YL1-215ENST00000468321 ZNF608Q9ULD9 1512 aaPredicted RBP12.82□□□□□ -0.36
SH3YL1-215ENST00000468321 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
SH3YL1-215ENST00000468321 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.36
SH3YL1-215ENST00000468321 IGF1RP08069 1367 aa12.79□□□□□ -0.36
SH3YL1-215ENST00000468321 GOLGA3Q08378 1498 aa12.79□□□□□ -0.36
SH3YL1-215ENST00000468321 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
SH3YL1-215ENST00000468321 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
SH3YL1-215ENST00000468321 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
SH3YL1-215ENST00000468321 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
SH3YL1-215ENST00000468321 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
SH3YL1-215ENST00000468321 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
SH3YL1-215ENST00000468321 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
SH3YL1-215ENST00000468321 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
SH3YL1-215ENST00000468321 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.37
SH3YL1-215ENST00000468321 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
SH3YL1-215ENST00000468321 CUL7Q14999 1698 aa12.7□□□□□ -0.38
SH3YL1-215ENST00000468321 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
SH3YL1-215ENST00000468321 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
SH3YL1-215ENST00000468321 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms