RNA–Protein interactions for RNA: ENST00000403658.5

SH3YL1-204, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2 BASIC

Gene SH3YL1, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-204ENST00000403658 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
SH3YL1-204ENST00000403658 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
SH3YL1-204ENST00000403658 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
SH3YL1-204ENST00000403658 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
SH3YL1-204ENST00000403658 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
SH3YL1-204ENST00000403658 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
SH3YL1-204ENST00000403658 FOXD1Q16676 465 aa24.35■■□□□ 1.49
SH3YL1-204ENST00000403658 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
SH3YL1-204ENST00000403658 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
SH3YL1-204ENST00000403658 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
SH3YL1-204ENST00000403658 ADRA2BP18089 450 aa23.14■■□□□ 1.29
SH3YL1-204ENST00000403658 ABCC9O60706 1549 aa23.09■■□□□ 1.29
SH3YL1-204ENST00000403658 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
SH3YL1-204ENST00000403658 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
SH3YL1-204ENST00000403658 PIAS4Q8N2W9 510 aaPredicted RBP22.9■■□□□ 1.26
SH3YL1-204ENST00000403658 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
SH3YL1-204ENST00000403658 NACADO15069 1562 aa22.74■■□□□ 1.23
SH3YL1-204ENST00000403658 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
SH3YL1-204ENST00000403658 MSH5O43196 834 aa22.59■■□□□ 1.21
SH3YL1-204ENST00000403658 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
SH3YL1-204ENST00000403658 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
SH3YL1-204ENST00000403658 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
SH3YL1-204ENST00000403658 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
SH3YL1-204ENST00000403658 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
SH3YL1-204ENST00000403658 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
SH3YL1-204ENST00000403658 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
SH3YL1-204ENST00000403658 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
SH3YL1-204ENST00000403658 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
SH3YL1-204ENST00000403658 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
SH3YL1-204ENST00000403658 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
SH3YL1-204ENST00000403658 WIZO95785 1651 aa21.25■□□□□ 0.99
SH3YL1-204ENST00000403658 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
SH3YL1-204ENST00000403658 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
SH3YL1-204ENST00000403658 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
SH3YL1-204ENST00000403658 PPP4R3CPQ6ZMV5 832 aa21.15■□□□□ 0.98
SH3YL1-204ENST00000403658 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
SH3YL1-204ENST00000403658 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
SH3YL1-204ENST00000403658 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
SH3YL1-204ENST00000403658 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
SH3YL1-204ENST00000403658 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
SH3YL1-204ENST00000403658 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
SH3YL1-204ENST00000403658 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
SH3YL1-204ENST00000403658 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
SH3YL1-204ENST00000403658 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
SH3YL1-204ENST00000403658 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
SH3YL1-204ENST00000403658 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
SH3YL1-204ENST00000403658 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
SH3YL1-204ENST00000403658 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
SH3YL1-204ENST00000403658 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
SH3YL1-204ENST00000403658 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
SH3YL1-204ENST00000403658 CFTRP13569 1480 aa20.41■□□□□ 0.86
SH3YL1-204ENST00000403658 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
SH3YL1-204ENST00000403658 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
SH3YL1-204ENST00000403658 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
SH3YL1-204ENST00000403658 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
SH3YL1-204ENST00000403658 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
SH3YL1-204ENST00000403658 KCNA4P22459 653 aa20.29■□□□□ 0.84
SH3YL1-204ENST00000403658 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
SH3YL1-204ENST00000403658 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
SH3YL1-204ENST00000403658 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
SH3YL1-204ENST00000403658 NESP48681 1621 aa20.2■□□□□ 0.82
SH3YL1-204ENST00000403658 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
SH3YL1-204ENST00000403658 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
SH3YL1-204ENST00000403658 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
SH3YL1-204ENST00000403658 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
SH3YL1-204ENST00000403658 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
SH3YL1-204ENST00000403658 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
SH3YL1-204ENST00000403658 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
SH3YL1-204ENST00000403658 CUX1P39880 1505 aa20.02■□□□□ 0.8
SH3YL1-204ENST00000403658 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
SH3YL1-204ENST00000403658 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
SH3YL1-204ENST00000403658 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
SH3YL1-204ENST00000403658 EEA1Q15075 1411 aa19.89■□□□□ 0.77
SH3YL1-204ENST00000403658 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
SH3YL1-204ENST00000403658 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
SH3YL1-204ENST00000403658 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
SH3YL1-204ENST00000403658 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
SH3YL1-204ENST00000403658 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
SH3YL1-204ENST00000403658 SOGA1O94964 1423 aa19.83■□□□□ 0.76
SH3YL1-204ENST00000403658 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
SH3YL1-204ENST00000403658 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
SH3YL1-204ENST00000403658 WDR62O43379 1518 aa19.76■□□□□ 0.75
SH3YL1-204ENST00000403658 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
SH3YL1-204ENST00000403658 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
SH3YL1-204ENST00000403658 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
SH3YL1-204ENST00000403658 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
SH3YL1-204ENST00000403658 CUX2O14529 1486 aa19.69■□□□□ 0.74
SH3YL1-204ENST00000403658 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
SH3YL1-204ENST00000403658 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
SH3YL1-204ENST00000403658 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
SH3YL1-204ENST00000403658 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
SH3YL1-204ENST00000403658 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SH3YL1-204ENST00000403658 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
SH3YL1-204ENST00000403658 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
SH3YL1-204ENST00000403658 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
SH3YL1-204ENST00000403658 IGF1RP08069 1367 aa19.54■□□□□ 0.72
SH3YL1-204ENST00000403658 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
SH3YL1-204ENST00000403658 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
SH3YL1-204ENST00000403658 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
SH3YL1-204ENST00000403658 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms