RNA–Protein interactions for RNA: ENST00000304987.3

SIK2-201, Transcript of salt inducible kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIK2, Length 9,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2-201ENST00000304987 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
SIK2-201ENST00000304987 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.53
SIK2-201ENST00000304987 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
SIK2-201ENST00000304987 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
SIK2-201ENST00000304987 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
SIK2-201ENST00000304987 RANGAP1P46060 587 aaPredicted RBP17.58■□□□□ 0.4
SIK2-201ENST00000304987 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
SIK2-201ENST00000304987 APLP2Q06481 763 aa17.56■□□□□ 0.4
SIK2-201ENST00000304987 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
SIK2-201ENST00000304987 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
SIK2-201ENST00000304987 MYT1LQ9UL68 1186 aa17.12■□□□□ 0.33
SIK2-201ENST00000304987 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
SIK2-201ENST00000304987 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
SIK2-201ENST00000304987 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
SIK2-201ENST00000304987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
SIK2-201ENST00000304987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
SIK2-201ENST00000304987 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
SIK2-201ENST00000304987 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
SIK2-201ENST00000304987 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
SIK2-201ENST00000304987 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
SIK2-201ENST00000304987 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
SIK2-201ENST00000304987 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
SIK2-201ENST00000304987 ITGAEP38570 1179 aa16.54■□□□□ 0.24
SIK2-201ENST00000304987 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
SIK2-201ENST00000304987 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
SIK2-201ENST00000304987 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SIK2-201ENST00000304987 FBLN2P98095 1184 aa16.31■□□□□ 0.2
SIK2-201ENST00000304987 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
SIK2-201ENST00000304987 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
SIK2-201ENST00000304987 ABCC9O60706 1549 aa16.18■□□□□ 0.18
SIK2-201ENST00000304987 BCANQ96GW7 911 aa16.18■□□□□ 0.18
SIK2-201ENST00000304987 NEFLP07196 543 aa16.17■□□□□ 0.18
SIK2-201ENST00000304987 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
SIK2-201ENST00000304987 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
SIK2-201ENST00000304987 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
SIK2-201ENST00000304987 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
SIK2-201ENST00000304987 TRIM52Q96A61 297 aa15.98■□□□□ 0.15
SIK2-201ENST00000304987 ARID3CA6NKF2 412 aa15.96■□□□□ 0.14
SIK2-201ENST00000304987 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
SIK2-201ENST00000304987 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
SIK2-201ENST00000304987 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
SIK2-201ENST00000304987 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
SIK2-201ENST00000304987 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
SIK2-201ENST00000304987 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
SIK2-201ENST00000304987 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
SIK2-201ENST00000304987 MYT1Q01538 1121 aa15.78■□□□□ 0.12
SIK2-201ENST00000304987 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
SIK2-201ENST00000304987 ZNF777Q9ULD5 760 aaPredicted RBP15.72■□□□□ 0.11
SIK2-201ENST00000304987 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
SIK2-201ENST00000304987 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
SIK2-201ENST00000304987 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
SIK2-201ENST00000304987 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
SIK2-201ENST00000304987 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
SIK2-201ENST00000304987 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
SIK2-201ENST00000304987 A0A0G2JS52 829 aa15.61■□□□□ 0.09
SIK2-201ENST00000304987 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
SIK2-201ENST00000304987 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
SIK2-201ENST00000304987 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
SIK2-201ENST00000304987 NEFMP07197 916 aa15.53■□□□□ 0.08
SIK2-201ENST00000304987 CANXP27824 592 aaKnown RBP15.46■□□□□ 0.07
SIK2-201ENST00000304987 ZBTB7CA1YPR0 619 aa15.45■□□□□ 0.06
SIK2-201ENST00000304987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
SIK2-201ENST00000304987 HRCP23327 699 aa15.33■□□□□ 0.05
SIK2-201ENST00000304987 ARID4BQ4LE39 1312 aaPredicted RBP15.33■□□□□ 0.04
SIK2-201ENST00000304987 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
SIK2-201ENST00000304987 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
SIK2-201ENST00000304987 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
SIK2-201ENST00000304987 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
SIK2-201ENST00000304987 HAP1P54257 671 aaPredicted RBP15.26■□□□□ 0.03
SIK2-201ENST00000304987 ANP32CO43423 234 aa15.26■□□□□ 0.03
SIK2-201ENST00000304987 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
SIK2-201ENST00000304987 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
SIK2-201ENST00000304987 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
SIK2-201ENST00000304987 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
SIK2-201ENST00000304987 SALL2Q9Y467 1007 aaPredicted RBP15.16■□□□□ 0.02
SIK2-201ENST00000304987 ARXQ96QS3 562 aa15.16■□□□□ 0.02
SIK2-201ENST00000304987 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
SIK2-201ENST00000304987 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
SIK2-201ENST00000304987 PPP1R15AO75807 674 aaPredicted RBP15.14■□□□□ 0.01
SIK2-201ENST00000304987 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
SIK2-201ENST00000304987 LMOD2Q6P5Q4 547 aa15.06■□□□□ 0
SIK2-201ENST00000304987 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
SIK2-201ENST00000304987 TSPY4P0CV99 314 aa15.02■□□□□ -0
SIK2-201ENST00000304987 TSPY10P0CW01 314 aa15.02■□□□□ -0
SIK2-201ENST00000304987 ERCC6Q03468 1493 aa15□□□□□ -0.01
SIK2-201ENST00000304987 NPHP1O15259 732 aa14.99□□□□□ -0.01
SIK2-201ENST00000304987 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
SIK2-201ENST00000304987 MLECQ14165 292 aa14.97□□□□□ -0.01
SIK2-201ENST00000304987 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
SIK2-201ENST00000304987 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
SIK2-201ENST00000304987 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
SIK2-201ENST00000304987 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
SIK2-201ENST00000304987 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
SIK2-201ENST00000304987 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
SIK2-201ENST00000304987 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
SIK2-201ENST00000304987 PLEKHD1A6NEE1 506 aa14.83□□□□□ -0.03
SIK2-201ENST00000304987 RRP7BPQ9NSQ0 103 aa14.83□□□□□ -0.04
SIK2-201ENST00000304987 MTUS2Q5JR59 1369 aa14.82□□□□□ -0.04
SIK2-201ENST00000304987 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
SIK2-201ENST00000304987 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms