RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 NISCHQ9Y2I1 1504 aa42.54■■■■■ 4.4
ATP2A3-212ENST00000572694 CCDC180Q9P1Z9 1646 aa38.09■■■■□ 3.69
ATP2A3-212ENST00000572694 ABCC9O60706 1549 aa37.91■■■■□ 3.66
ATP2A3-212ENST00000572694 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
ATP2A3-212ENST00000572694 NACADO15069 1562 aa36.02■■■■□ 3.36
ATP2A3-212ENST00000572694 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.32
ATP2A3-212ENST00000572694 MYO15BQ96JP2 1530 aa35.64■■■■□ 3.3
ATP2A3-212ENST00000572694 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
ATP2A3-212ENST00000572694 PABPN1Q86U42 306 aaKnown RBP eCLIP35.34■■■■□ 3.25
ATP2A3-212ENST00000572694 UNC13AQ9UPW8 1703 aa35.34■■■■□ 3.25
ATP2A3-212ENST00000572694 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
ATP2A3-212ENST00000572694 DCAF1Q9Y4B6 1507 aa35.21■■■■□ 3.23
ATP2A3-212ENST00000572694 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
ATP2A3-212ENST00000572694 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
ATP2A3-212ENST00000572694 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
ATP2A3-212ENST00000572694 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
ATP2A3-212ENST00000572694 EIF4G1Q04637 1599 aaKnown RBP34.24■■■■□ 3.07
ATP2A3-212ENST00000572694 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
ATP2A3-212ENST00000572694 NCAPD3P42695 1498 aa33.29■■■□□ 2.92
ATP2A3-212ENST00000572694 ATAD2BQ9ULI0 1458 aa33.15■■■□□ 2.9
ATP2A3-212ENST00000572694 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
ATP2A3-212ENST00000572694 SMARCA2P51531 1590 aa33.07■■■□□ 2.88
ATP2A3-212ENST00000572694 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
ATP2A3-212ENST00000572694 HMGXB3Q12766 1538 aa32.99■■■□□ 2.87
ATP2A3-212ENST00000572694 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
ATP2A3-212ENST00000572694 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
ATP2A3-212ENST00000572694 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
ATP2A3-212ENST00000572694 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
ATP2A3-212ENST00000572694 CUX2O14529 1486 aa32.69■■■□□ 2.82
ATP2A3-212ENST00000572694 NESP48681 1621 aa32.6■■■□□ 2.81
ATP2A3-212ENST00000572694 DNAJC5Q9H3Z4 198 aa32.59■■■□□ 2.81
ATP2A3-212ENST00000572694 LAMC3Q9Y6N6 1575 aa32.46■■■□□ 2.79
ATP2A3-212ENST00000572694 WIZO95785 1651 aa32.33■■■□□ 2.77
ATP2A3-212ENST00000572694 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
ATP2A3-212ENST00000572694 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
ATP2A3-212ENST00000572694 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
ATP2A3-212ENST00000572694 KIF21AQ7Z4S6 1674 aa32.17■■■□□ 2.74
ATP2A3-212ENST00000572694 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
ATP2A3-212ENST00000572694 TOP2AP11388 1531 aaKnown RBP31.95■■■□□ 2.71
ATP2A3-212ENST00000572694 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.7
ATP2A3-212ENST00000572694 CFTRP13569 1480 aa31.91■■■□□ 2.7
ATP2A3-212ENST00000572694 WDR62O43379 1518 aa31.87■■■□□ 2.69
ATP2A3-212ENST00000572694 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
ATP2A3-212ENST00000572694 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
ATP2A3-212ENST00000572694 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
ATP2A3-212ENST00000572694 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
ATP2A3-212ENST00000572694 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
ATP2A3-212ENST00000572694 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
ATP2A3-212ENST00000572694 OSCARQ8IYS5 282 aa31.28■■■□□ 2.6
ATP2A3-212ENST00000572694 TOPBP1Q92547 1522 aa31.25■■■□□ 2.59
ATP2A3-212ENST00000572694 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
ATP2A3-212ENST00000572694 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
ATP2A3-212ENST00000572694 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
ATP2A3-212ENST00000572694 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
ATP2A3-212ENST00000572694 TARBP1Q13395 1621 aaKnown RBP30.96■■■□□ 2.55
ATP2A3-212ENST00000572694 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
ATP2A3-212ENST00000572694 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
ATP2A3-212ENST00000572694 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.546e-7■■■■■ 29.7
ATP2A3-212ENST00000572694 SOGA1O94964 1423 aa30.84■■■□□ 2.53
ATP2A3-212ENST00000572694 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
ATP2A3-212ENST00000572694 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
ATP2A3-212ENST00000572694 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
ATP2A3-212ENST00000572694 CUX1P39880 1505 aa30.73■■■□□ 2.51
ATP2A3-212ENST00000572694 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
ATP2A3-212ENST00000572694 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
ATP2A3-212ENST00000572694 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
ATP2A3-212ENST00000572694 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
ATP2A3-212ENST00000572694 WDR97A6NE52 1622 aa30.71■■■□□ 2.51
ATP2A3-212ENST00000572694 CHD1O14646 1710 aa30.68■■■□□ 2.5
ATP2A3-212ENST00000572694 ARHGEF11O15085 1522 aa30.67■■■□□ 2.5
ATP2A3-212ENST00000572694 FBLN2P98095 1184 aa30.66■■■□□ 2.5
ATP2A3-212ENST00000572694 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
ATP2A3-212ENST00000572694 SNAPC4Q5SXM2 1469 aa30.54■■■□□ 2.48
ATP2A3-212ENST00000572694 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
ATP2A3-212ENST00000572694 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
ATP2A3-212ENST00000572694 CYB5RLQ6IPT4 315 aa30.49■■■□□ 2.47
ATP2A3-212ENST00000572694 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
ATP2A3-212ENST00000572694 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
ATP2A3-212ENST00000572694 SYNJ2O15056 1496 aa30.43■■■□□ 2.46
ATP2A3-212ENST00000572694 SYNJ1O43426 1573 aa30.38■■■□□ 2.45
ATP2A3-212ENST00000572694 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
ATP2A3-212ENST00000572694 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
ATP2A3-212ENST00000572694 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
ATP2A3-212ENST00000572694 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
ATP2A3-212ENST00000572694 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
ATP2A3-212ENST00000572694 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
ATP2A3-212ENST00000572694 BIVM-ERCC5R4GMW8 1640 aa30.3■■■□□ 2.44
ATP2A3-212ENST00000572694 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
ATP2A3-212ENST00000572694 FHAD1B1AJZ9 1412 aa30.09■■■□□ 2.41
ATP2A3-212ENST00000572694 ADAMTS12P58397 1594 aa30.08■■■□□ 2.41
ATP2A3-212ENST00000572694 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
ATP2A3-212ENST00000572694 TRHP20396 242 aaPredicted RBP30.07■■■□□ 2.4
ATP2A3-212ENST00000572694 NUP160Q12769 1436 aa30.05■■■□□ 2.4
ATP2A3-212ENST00000572694 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
ATP2A3-212ENST00000572694 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
ATP2A3-212ENST00000572694 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
ATP2A3-212ENST00000572694 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
ATP2A3-212ENST00000572694 IGF1RP08069 1367 aa29.77■■■□□ 2.36
ATP2A3-212ENST00000572694 KIF27Q86VH2 1401 aa29.75■■■□□ 2.35
ATP2A3-212ENST00000572694 PRG4Q92954 1404 aaPredicted RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms