RNA–Protein interactions for RNA: ENST00000534951.5

RAB35-202, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB35, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-202ENST00000534951 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
RAB35-202ENST00000534951 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
RAB35-202ENST00000534951 ABCC9O60706 1549 aa33.77■■■■□ 3
RAB35-202ENST00000534951 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
RAB35-202ENST00000534951 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
RAB35-202ENST00000534951 NACADO15069 1562 aa32.32■■■□□ 2.76
RAB35-202ENST00000534951 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
RAB35-202ENST00000534951 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
RAB35-202ENST00000534951 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
RAB35-202ENST00000534951 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
RAB35-202ENST00000534951 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
RAB35-202ENST00000534951 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.63
RAB35-202ENST00000534951 SCRIBQ14160 1630 aa31.45■■■□□ 2.62
RAB35-202ENST00000534951 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
RAB35-202ENST00000534951 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
RAB35-202ENST00000534951 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
RAB35-202ENST00000534951 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
RAB35-202ENST00000534951 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
RAB35-202ENST00000534951 SMARCA4P51532 1647 aa30.02■■■□□ 2.4
RAB35-202ENST00000534951 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.39
RAB35-202ENST00000534951 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
RAB35-202ENST00000534951 MROH2BQ7Z745 1585 aa29.84■■■□□ 2.37
RAB35-202ENST00000534951 NCAPD3P42695 1498 aa29.83■■■□□ 2.37
RAB35-202ENST00000534951 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
RAB35-202ENST00000534951 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
RAB35-202ENST00000534951 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
RAB35-202ENST00000534951 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
RAB35-202ENST00000534951 WIZO95785 1651 aa29.53■■■□□ 2.32
RAB35-202ENST00000534951 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
RAB35-202ENST00000534951 NESP48681 1621 aa29.22■■■□□ 2.27
RAB35-202ENST00000534951 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
RAB35-202ENST00000534951 ERCC6Q03468 1493 aa29.08■■■□□ 2.25
RAB35-202ENST00000534951 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
RAB35-202ENST00000534951 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
RAB35-202ENST00000534951 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
RAB35-202ENST00000534951 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
RAB35-202ENST00000534951 KIF21AQ7Z4S6 1674 aa28.85■■■□□ 2.21
RAB35-202ENST00000534951 CFTRP13569 1480 aa28.79■■■□□ 2.2
RAB35-202ENST00000534951 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
RAB35-202ENST00000534951 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
RAB35-202ENST00000534951 CUX2O14529 1486 aa28.73■■■□□ 2.19
RAB35-202ENST00000534951 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
RAB35-202ENST00000534951 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
RAB35-202ENST00000534951 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
RAB35-202ENST00000534951 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
RAB35-202ENST00000534951 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
RAB35-202ENST00000534951 WDR62O43379 1518 aa28.49■■■□□ 2.15
RAB35-202ENST00000534951 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
RAB35-202ENST00000534951 TOPBP1Q92547 1522 aa28.21■■■□□ 2.11
RAB35-202ENST00000534951 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
RAB35-202ENST00000534951 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
RAB35-202ENST00000534951 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
RAB35-202ENST00000534951 CUX1P39880 1505 aa28■■■□□ 2.07
RAB35-202ENST00000534951 POLA1P09884 1462 aaPredicted RBP27.96■■■□□ 2.07
RAB35-202ENST00000534951 ZNF608Q9ULD9 1512 aaPredicted RBP27.96■■■□□ 2.07
RAB35-202ENST00000534951 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
RAB35-202ENST00000534951 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
RAB35-202ENST00000534951 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
RAB35-202ENST00000534951 SOGA1O94964 1423 aa27.84■■■□□ 2.05
RAB35-202ENST00000534951 EIF4G3O43432 1585 aaKnown RBP27.81■■■□□ 2.04
RAB35-202ENST00000534951 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.041e-7■■□□□ 12.1
RAB35-202ENST00000534951 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
RAB35-202ENST00000534951 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
RAB35-202ENST00000534951 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
RAB35-202ENST00000534951 TOP2BQ02880 1626 aa27.7■■■□□ 2.03
RAB35-202ENST00000534951 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.02
RAB35-202ENST00000534951 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
RAB35-202ENST00000534951 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
RAB35-202ENST00000534951 OSCARQ8IYS5 282 aa27.57■■■□□ 2
RAB35-202ENST00000534951 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
RAB35-202ENST00000534951 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
RAB35-202ENST00000534951 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
RAB35-202ENST00000534951 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
RAB35-202ENST00000534951 CHD1O14646 1710 aa27.49■■□□□ 1.99
RAB35-202ENST00000534951 FBLN2P98095 1184 aa27.48■■□□□ 1.99
RAB35-202ENST00000534951 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
RAB35-202ENST00000534951 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
RAB35-202ENST00000534951 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
RAB35-202ENST00000534951 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
RAB35-202ENST00000534951 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
RAB35-202ENST00000534951 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
RAB35-202ENST00000534951 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
RAB35-202ENST00000534951 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
RAB35-202ENST00000534951 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
RAB35-202ENST00000534951 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
RAB35-202ENST00000534951 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
RAB35-202ENST00000534951 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
RAB35-202ENST00000534951 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
RAB35-202ENST00000534951 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
RAB35-202ENST00000534951 ARHGEF11O15085 1522 aa27.14■■□□□ 1.94
RAB35-202ENST00000534951 IGF1RP08069 1367 aa27.1■■□□□ 1.93
RAB35-202ENST00000534951 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
RAB35-202ENST00000534951 NUP160Q12769 1436 aa27.04■■□□□ 1.92
RAB35-202ENST00000534951 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
RAB35-202ENST00000534951 CUL7Q14999 1698 aa26.99■■□□□ 1.91
RAB35-202ENST00000534951 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
RAB35-202ENST00000534951 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
RAB35-202ENST00000534951 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
RAB35-202ENST00000534951 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
RAB35-202ENST00000534951 SHROOM2Q13796 1616 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms