RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 NISCHQ9Y2I1 1504 aa50.36■■■■■ 5.65
CSNK1G3-206ENST00000511130 CCDC180Q9P1Z9 1646 aa44.4■■■■■ 4.7
CSNK1G3-206ENST00000511130 ABCC9O60706 1549 aa43■■■■■ 4.47
CSNK1G3-206ENST00000511130 ZCCHC6Q5VYS8 1495 aaKnown RBP42.07■■■■■ 4.33
CSNK1G3-206ENST00000511130 DCAF8L2P0C7V8 631 aa41.94■■■■■ 4.3
CSNK1G3-206ENST00000511130 NACADO15069 1562 aa41.62■■■■■ 4.25
CSNK1G3-206ENST00000511130 DCAF1Q9Y4B6 1507 aa41.62■■■■■ 4.25
CSNK1G3-206ENST00000511130 MYO15BQ96JP2 1530 aa41.53■■■■■ 4.24
CSNK1G3-206ENST00000511130 RB1CC1Q8TDY2 1594 aa41.52■■■■■ 4.24
CSNK1G3-206ENST00000511130 SCRIBQ14160 1630 aa40.7■■■■■ 4.11
CSNK1G3-206ENST00000511130 UNC13AQ9UPW8 1703 aa40.64■■■■■ 4.1
CSNK1G3-206ENST00000511130 PABPN1Q86U42 306 aaKnown RBP eCLIP40.36■■■■■ 4.05
CSNK1G3-206ENST00000511130 BICRAQ9NZM4 1560 aa40.33■■■■■ 4.05
CSNK1G3-206ENST00000511130 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.04
CSNK1G3-206ENST00000511130 CECR2Q9BXF3 1484 aa39.25■■■■□ 3.87
CSNK1G3-206ENST00000511130 EIF4G1Q04637 1599 aaKnown RBP39.18■■■■□ 3.86
CSNK1G3-206ENST00000511130 DNAJC5BQ9UF47 199 aa39■■■■□ 3.83
CSNK1G3-206ENST00000511130 BAZ1AQ9NRL2 1556 aaPredicted RBP38.94■■■■□ 3.82
CSNK1G3-206ENST00000511130 SMARCA4P51532 1647 aa38.93■■■■□ 3.82
CSNK1G3-206ENST00000511130 MROH2BQ7Z745 1585 aa38.88■■■■□ 3.82
CSNK1G3-206ENST00000511130 CC2D2AQ9P2K1 1620 aa38.88■■■■□ 3.81
CSNK1G3-206ENST00000511130 RSF1Q96T23 1441 aaPredicted RBP38.65■■■■□ 3.78
CSNK1G3-206ENST00000511130 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
CSNK1G3-206ENST00000511130 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
CSNK1G3-206ENST00000511130 WIZO95785 1651 aa38.49■■■■□ 3.75
CSNK1G3-206ENST00000511130 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
CSNK1G3-206ENST00000511130 NCAPD3P42695 1498 aa38.43■■■■□ 3.74
CSNK1G3-206ENST00000511130 BAZ1BQ9UIG0 1483 aaKnown RBP38.28■■■■□ 3.72
CSNK1G3-206ENST00000511130 HMGXB3Q12766 1538 aa38.27■■■■□ 3.72
CSNK1G3-206ENST00000511130 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
CSNK1G3-206ENST00000511130 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
CSNK1G3-206ENST00000511130 CCDC88BA6NC98 1476 aa37.66■■■■□ 3.62
CSNK1G3-206ENST00000511130 NESP48681 1621 aa37.43■■■■□ 3.58
CSNK1G3-206ENST00000511130 CADPSQ9ULU8 1353 aa37.38■■■■□ 3.57
CSNK1G3-206ENST00000511130 LAMC3Q9Y6N6 1575 aa37.28■■■■□ 3.56
CSNK1G3-206ENST00000511130 CFTRP13569 1480 aa37.27■■■■□ 3.56
CSNK1G3-206ENST00000511130 PDS5BQ9NTI5 1447 aa37.03■■■■□ 3.52
CSNK1G3-206ENST00000511130 PRDM2Q13029 1718 aa36.96■■■■□ 3.51
CSNK1G3-206ENST00000511130 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
CSNK1G3-206ENST00000511130 FANCD2Q9BXW9 1451 aa36.95■■■■□ 3.51
CSNK1G3-206ENST00000511130 KIF21AQ7Z4S6 1674 aa36.93■■■■□ 3.5
CSNK1G3-206ENST00000511130 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
CSNK1G3-206ENST00000511130 MRC2Q9UBG0 1479 aa36.64■■■■□ 3.46
CSNK1G3-206ENST00000511130 THOC2Q8NI27 1593 aaKnown RBP36.63■■■■□ 3.45
CSNK1G3-206ENST00000511130 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
CSNK1G3-206ENST00000511130 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
CSNK1G3-206ENST00000511130 WDR62O43379 1518 aa36.48■■■■□ 3.43
CSNK1G3-206ENST00000511130 TOPBP1Q92547 1522 aa36.44■■■■□ 3.42
CSNK1G3-206ENST00000511130 CUX1P39880 1505 aa36.43■■■■□ 3.42
CSNK1G3-206ENST00000511130 DNMBPQ6XZF7 1577 aa36.41■■■■□ 3.42
CSNK1G3-206ENST00000511130 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
CSNK1G3-206ENST00000511130 SYNJ1O43426 1573 aa36.31■■■■□ 3.4
CSNK1G3-206ENST00000511130 CUX2O14529 1486 aa36.28■■■■□ 3.4
CSNK1G3-206ENST00000511130 TOP2BQ02880 1626 aa36.22■■■■□ 3.39
CSNK1G3-206ENST00000511130 BIVM-ERCC5R4GMW8 1640 aa36.2■■■■□ 3.39
CSNK1G3-206ENST00000511130 FGD5Q6ZNL6 1462 aa36.19■■■■□ 3.38
CSNK1G3-206ENST00000511130 POLA1P09884 1462 aaPredicted RBP36.17■■■■□ 3.38
CSNK1G3-206ENST00000511130 RAD54L2Q9Y4B4 1467 aa36.08■■■■□ 3.37
CSNK1G3-206ENST00000511130 SOGA1O94964 1423 aa36.05■■■■□ 3.36
CSNK1G3-206ENST00000511130 CHIC1Q5VXU3 224 aa36.03■■■■□ 3.36
CSNK1G3-206ENST00000511130 IFT140Q96RY7 1462 aa36.01■■■■□ 3.36
CSNK1G3-206ENST00000511130 TRIM41Q8WV44 630 aa36.01■■■■□ 3.35
CSNK1G3-206ENST00000511130 TARBP1Q13395 1621 aaKnown RBP35.98■■■■□ 3.35
CSNK1G3-206ENST00000511130 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
CSNK1G3-206ENST00000511130 ABCA10Q8WWZ4 1543 aa35.82■■■■□ 3.33
CSNK1G3-206ENST00000511130 TDRD9Q8NDG6 1382 aaKnown RBP35.81■■■■□ 3.32
CSNK1G3-206ENST00000511130 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
CSNK1G3-206ENST00000511130 AQRO60306 1485 aaKnown RBP eCLIP35.77■■■■□ 3.32
CSNK1G3-206ENST00000511130 EIF4G3O43432 1585 aaKnown RBP35.7■■■■□ 3.31
CSNK1G3-206ENST00000511130 ABCA5Q8WWZ7 1642 aa35.63■■■■□ 3.29
CSNK1G3-206ENST00000511130 GAPVD1Q14C86 1478 aa35.62■■■■□ 3.29
CSNK1G3-206ENST00000511130 RUSC2Q8N2Y8 1516 aa35.58■■■■□ 3.29
CSNK1G3-206ENST00000511130 KIF27Q86VH2 1401 aa35.56■■■■□ 3.28
CSNK1G3-206ENST00000511130 GRIN2BQ13224 1484 aa35.51■■■■□ 3.27
CSNK1G3-206ENST00000511130 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
CSNK1G3-206ENST00000511130 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
CSNK1G3-206ENST00000511130 IGF1RP08069 1367 aa35.4■■■■□ 3.26
CSNK1G3-206ENST00000511130 ERICH3Q5RHP9 1530 aa35.38■■■■□ 3.25
CSNK1G3-206ENST00000511130 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
CSNK1G3-206ENST00000511130 MAGI1Q96QZ7 1491 aaPredicted RBP35.32■■■■□ 3.24
CSNK1G3-206ENST00000511130 EEA1Q15075 1411 aa35.25■■■■□ 3.23
CSNK1G3-206ENST00000511130 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
CSNK1G3-206ENST00000511130 FBLN2P98095 1184 aa35.23■■■■□ 3.23
CSNK1G3-206ENST00000511130 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
CSNK1G3-206ENST00000511130 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
CSNK1G3-206ENST00000511130 SYNJ2O15056 1496 aa35.2■■■■□ 3.22
CSNK1G3-206ENST00000511130 CARMIL1Q5VZK9 1371 aa35.18■■■■□ 3.22
CSNK1G3-206ENST00000511130 CHMP7Q8WUX9 453 aaPredicted RBP35.18■■■■□ 3.22
CSNK1G3-206ENST00000511130 CUL7Q14999 1698 aa35.16■■■■□ 3.22
CSNK1G3-206ENST00000511130 CHD1O14646 1710 aa35.15■■■■□ 3.22
CSNK1G3-206ENST00000511130 PRXQ9BXM0 1461 aa35.07■■■■□ 3.2
CSNK1G3-206ENST00000511130 GRIN2AQ12879 1464 aa35.06■■■■□ 3.2
CSNK1G3-206ENST00000511130 RAPGEF2Q9Y4G8 1499 aa35.02■■■■□ 3.2
CSNK1G3-206ENST00000511130 OSCARQ8IYS5 282 aa34.96■■■■□ 3.19
CSNK1G3-206ENST00000511130 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
CSNK1G3-206ENST00000511130 CEP170Q5SW79 1584 aa34.9■■■■□ 3.18
CSNK1G3-206ENST00000511130 NUP160Q12769 1436 aa34.88■■■■□ 3.17
CSNK1G3-206ENST00000511130 KIF21BO75037 1637 aa34.87■■■■□ 3.17
CSNK1G3-206ENST00000511130 CLASP1Q7Z460 1538 aa34.77■■■■□ 3.16
CSNK1G3-206ENST00000511130 GOLGA3Q08378 1498 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms