RNA–Protein interactions for RNA: ENST00000538903.1

RAB35-203, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-203ENST00000538903 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
RAB35-203ENST00000538903 ABCC9O60706 1549 aa32.71■■■□□ 2.83
RAB35-203ENST00000538903 CCDC180Q9P1Z9 1646 aa32.54■■■□□ 2.8
RAB35-203ENST00000538903 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
RAB35-203ENST00000538903 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
RAB35-203ENST00000538903 NACADO15069 1562 aa30.79■■■□□ 2.52
RAB35-203ENST00000538903 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
RAB35-203ENST00000538903 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
RAB35-203ENST00000538903 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.46
RAB35-203ENST00000538903 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
RAB35-203ENST00000538903 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
RAB35-203ENST00000538903 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
RAB35-203ENST00000538903 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
RAB35-203ENST00000538903 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
RAB35-203ENST00000538903 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
RAB35-203ENST00000538903 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
RAB35-203ENST00000538903 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.31
RAB35-203ENST00000538903 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
RAB35-203ENST00000538903 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
RAB35-203ENST00000538903 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
RAB35-203ENST00000538903 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
RAB35-203ENST00000538903 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
RAB35-203ENST00000538903 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
RAB35-203ENST00000538903 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
RAB35-203ENST00000538903 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
RAB35-203ENST00000538903 CUX2O14529 1486 aa28.16■■■□□ 2.1
RAB35-203ENST00000538903 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
RAB35-203ENST00000538903 NESP48681 1621 aa28.09■■■□□ 2.09
RAB35-203ENST00000538903 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
RAB35-203ENST00000538903 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
RAB35-203ENST00000538903 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
RAB35-203ENST00000538903 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
RAB35-203ENST00000538903 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
RAB35-203ENST00000538903 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
RAB35-203ENST00000538903 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
RAB35-203ENST00000538903 WIZO95785 1651 aa27.63■■■□□ 2.01
RAB35-203ENST00000538903 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
RAB35-203ENST00000538903 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
RAB35-203ENST00000538903 WDR62O43379 1518 aa27.37■■□□□ 1.97
RAB35-203ENST00000538903 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
RAB35-203ENST00000538903 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
RAB35-203ENST00000538903 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
RAB35-203ENST00000538903 CFTRP13569 1480 aa27.25■■□□□ 1.95
RAB35-203ENST00000538903 TOP2AP11388 1531 aaKnown RBP27.23■■□□□ 1.95
RAB35-203ENST00000538903 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
RAB35-203ENST00000538903 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
RAB35-203ENST00000538903 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
RAB35-203ENST00000538903 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.91
RAB35-203ENST00000538903 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
RAB35-203ENST00000538903 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
RAB35-203ENST00000538903 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
RAB35-203ENST00000538903 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
RAB35-203ENST00000538903 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
RAB35-203ENST00000538903 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
RAB35-203ENST00000538903 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
RAB35-203ENST00000538903 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
RAB35-203ENST00000538903 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
RAB35-203ENST00000538903 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
RAB35-203ENST00000538903 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
RAB35-203ENST00000538903 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.831e-7■■□□□ 12.1
RAB35-203ENST00000538903 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
RAB35-203ENST00000538903 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
RAB35-203ENST00000538903 CHD1O14646 1710 aa26.43■■□□□ 1.82
RAB35-203ENST00000538903 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
RAB35-203ENST00000538903 SOGA1O94964 1423 aa26.35■■□□□ 1.81
RAB35-203ENST00000538903 FBLN2P98095 1184 aa26.35■■□□□ 1.81
RAB35-203ENST00000538903 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
RAB35-203ENST00000538903 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
RAB35-203ENST00000538903 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
RAB35-203ENST00000538903 CUX1P39880 1505 aa26.28■■□□□ 1.8
RAB35-203ENST00000538903 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
RAB35-203ENST00000538903 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
RAB35-203ENST00000538903 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
RAB35-203ENST00000538903 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
RAB35-203ENST00000538903 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
RAB35-203ENST00000538903 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
RAB35-203ENST00000538903 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
RAB35-203ENST00000538903 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
RAB35-203ENST00000538903 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
RAB35-203ENST00000538903 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
RAB35-203ENST00000538903 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
RAB35-203ENST00000538903 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
RAB35-203ENST00000538903 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
RAB35-203ENST00000538903 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
RAB35-203ENST00000538903 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
RAB35-203ENST00000538903 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
RAB35-203ENST00000538903 TOP2BQ02880 1626 aa25.8■■□□□ 1.72
RAB35-203ENST00000538903 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
RAB35-203ENST00000538903 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
RAB35-203ENST00000538903 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
RAB35-203ENST00000538903 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
RAB35-203ENST00000538903 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
RAB35-203ENST00000538903 NUP160Q12769 1436 aa25.71■■□□□ 1.71
RAB35-203ENST00000538903 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
RAB35-203ENST00000538903 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
RAB35-203ENST00000538903 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
RAB35-203ENST00000538903 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
RAB35-203ENST00000538903 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
RAB35-203ENST00000538903 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
RAB35-203ENST00000538903 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms