RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
SH3YL1-225ENST00000488979 ABCC9O60706 1549 aa23.09■■□□□ 1.29
SH3YL1-225ENST00000488979 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
SH3YL1-225ENST00000488979 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
SH3YL1-225ENST00000488979 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
SH3YL1-225ENST00000488979 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
SH3YL1-225ENST00000488979 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
SH3YL1-225ENST00000488979 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
SH3YL1-225ENST00000488979 NACADO15069 1562 aa21.4■■□□□ 1.02
SH3YL1-225ENST00000488979 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
SH3YL1-225ENST00000488979 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
SH3YL1-225ENST00000488979 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
SH3YL1-225ENST00000488979 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
SH3YL1-225ENST00000488979 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
SH3YL1-225ENST00000488979 DNAJC5Q9H3Z4 198 aa20.73■□□□□ 0.91
SH3YL1-225ENST00000488979 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
SH3YL1-225ENST00000488979 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
SH3YL1-225ENST00000488979 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
SH3YL1-225ENST00000488979 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
SH3YL1-225ENST00000488979 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
SH3YL1-225ENST00000488979 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
SH3YL1-225ENST00000488979 CUX2O14529 1486 aa20.02■□□□□ 0.8
SH3YL1-225ENST00000488979 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
SH3YL1-225ENST00000488979 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
SH3YL1-225ENST00000488979 NESP48681 1621 aa19.72■□□□□ 0.75
SH3YL1-225ENST00000488979 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
SH3YL1-225ENST00000488979 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
SH3YL1-225ENST00000488979 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
SH3YL1-225ENST00000488979 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
SH3YL1-225ENST00000488979 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
SH3YL1-225ENST00000488979 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
SH3YL1-225ENST00000488979 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
SH3YL1-225ENST00000488979 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
SH3YL1-225ENST00000488979 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
SH3YL1-225ENST00000488979 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.69
SH3YL1-225ENST00000488979 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
SH3YL1-225ENST00000488979 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
SH3YL1-225ENST00000488979 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
SH3YL1-225ENST00000488979 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
SH3YL1-225ENST00000488979 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
SH3YL1-225ENST00000488979 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
SH3YL1-225ENST00000488979 WDR62O43379 1518 aa19.13■□□□□ 0.65
SH3YL1-225ENST00000488979 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
SH3YL1-225ENST00000488979 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
SH3YL1-225ENST00000488979 WIZO95785 1651 aa18.95■□□□□ 0.62
SH3YL1-225ENST00000488979 CFTRP13569 1480 aa18.88■□□□□ 0.61
SH3YL1-225ENST00000488979 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
SH3YL1-225ENST00000488979 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
SH3YL1-225ENST00000488979 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
SH3YL1-225ENST00000488979 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
SH3YL1-225ENST00000488979 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
SH3YL1-225ENST00000488979 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
SH3YL1-225ENST00000488979 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
SH3YL1-225ENST00000488979 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
SH3YL1-225ENST00000488979 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
SH3YL1-225ENST00000488979 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
SH3YL1-225ENST00000488979 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
SH3YL1-225ENST00000488979 FBLN2P98095 1184 aa18.56■□□□□ 0.56
SH3YL1-225ENST00000488979 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
SH3YL1-225ENST00000488979 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
SH3YL1-225ENST00000488979 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.56
SH3YL1-225ENST00000488979 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
SH3YL1-225ENST00000488979 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
SH3YL1-225ENST00000488979 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
SH3YL1-225ENST00000488979 CHD1O14646 1710 aa18.46■□□□□ 0.55
SH3YL1-225ENST00000488979 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
SH3YL1-225ENST00000488979 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SH3YL1-225ENST00000488979 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
SH3YL1-225ENST00000488979 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
SH3YL1-225ENST00000488979 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
SH3YL1-225ENST00000488979 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
SH3YL1-225ENST00000488979 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
SH3YL1-225ENST00000488979 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
SH3YL1-225ENST00000488979 SOGA1O94964 1423 aa18.31■□□□□ 0.52
SH3YL1-225ENST00000488979 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
SH3YL1-225ENST00000488979 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
SH3YL1-225ENST00000488979 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
SH3YL1-225ENST00000488979 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
SH3YL1-225ENST00000488979 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
SH3YL1-225ENST00000488979 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
SH3YL1-225ENST00000488979 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
SH3YL1-225ENST00000488979 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
SH3YL1-225ENST00000488979 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
SH3YL1-225ENST00000488979 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
SH3YL1-225ENST00000488979 CUX1P39880 1505 aa18.07■□□□□ 0.48
SH3YL1-225ENST00000488979 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
SH3YL1-225ENST00000488979 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
SH3YL1-225ENST00000488979 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
SH3YL1-225ENST00000488979 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
SH3YL1-225ENST00000488979 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
SH3YL1-225ENST00000488979 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
SH3YL1-225ENST00000488979 NUP160Q12769 1436 aa17.86■□□□□ 0.45
SH3YL1-225ENST00000488979 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
SH3YL1-225ENST00000488979 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
SH3YL1-225ENST00000488979 KDM4FA0A1W2PPD8 638 aa17.83■□□□□ 0.44
SH3YL1-225ENST00000488979 JPH4Q96JJ6 628 aa17.8■□□□□ 0.44
SH3YL1-225ENST00000488979 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
SH3YL1-225ENST00000488979 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
SH3YL1-225ENST00000488979 PRG4Q92954 1404 aaPredicted RBP17.78■□□□□ 0.44
SH3YL1-225ENST00000488979 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms