RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
MECP2-211ENST00000496908 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
MECP2-211ENST00000496908 ABCC9O60706 1549 aa30.71■■■□□ 2.51
MECP2-211ENST00000496908 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
MECP2-211ENST00000496908 NACADO15069 1562 aa29.14■■■□□ 2.26
MECP2-211ENST00000496908 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
MECP2-211ENST00000496908 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
MECP2-211ENST00000496908 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
MECP2-211ENST00000496908 UNC13AQ9UPW8 1703 aa28.7■■■□□ 2.19
MECP2-211ENST00000496908 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
MECP2-211ENST00000496908 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
MECP2-211ENST00000496908 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
MECP2-211ENST00000496908 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
MECP2-211ENST00000496908 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
MECP2-211ENST00000496908 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
MECP2-211ENST00000496908 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
MECP2-211ENST00000496908 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
MECP2-211ENST00000496908 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
MECP2-211ENST00000496908 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
MECP2-211ENST00000496908 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
MECP2-211ENST00000496908 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
MECP2-211ENST00000496908 SMARCA2P51531 1590 aa26.79■■□□□ 1.88
MECP2-211ENST00000496908 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
MECP2-211ENST00000496908 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
MECP2-211ENST00000496908 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
MECP2-211ENST00000496908 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
MECP2-211ENST00000496908 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
MECP2-211ENST00000496908 NESP48681 1621 aa26.47■■□□□ 1.83
MECP2-211ENST00000496908 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
MECP2-211ENST00000496908 CUX2O14529 1486 aa26.35■■□□□ 1.81
MECP2-211ENST00000496908 WIZO95785 1651 aa26.34■■□□□ 1.81
MECP2-211ENST00000496908 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
MECP2-211ENST00000496908 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
MECP2-211ENST00000496908 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
MECP2-211ENST00000496908 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
MECP2-211ENST00000496908 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
MECP2-211ENST00000496908 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
MECP2-211ENST00000496908 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
MECP2-211ENST00000496908 TOP2AP11388 1531 aaKnown RBP26.01■■□□□ 1.75
MECP2-211ENST00000496908 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
MECP2-211ENST00000496908 CFTRP13569 1480 aa25.87■■□□□ 1.73
MECP2-211ENST00000496908 WDR62O43379 1518 aa25.83■■□□□ 1.73
MECP2-211ENST00000496908 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
MECP2-211ENST00000496908 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
MECP2-211ENST00000496908 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
MECP2-211ENST00000496908 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
MECP2-211ENST00000496908 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
MECP2-211ENST00000496908 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
MECP2-211ENST00000496908 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
MECP2-211ENST00000496908 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
MECP2-211ENST00000496908 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
MECP2-211ENST00000496908 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
MECP2-211ENST00000496908 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
MECP2-211ENST00000496908 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
MECP2-211ENST00000496908 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
MECP2-211ENST00000496908 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
MECP2-211ENST00000496908 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
MECP2-211ENST00000496908 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.6
MECP2-211ENST00000496908 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
MECP2-211ENST00000496908 CUX1P39880 1505 aa25.03■■□□□ 1.6
MECP2-211ENST00000496908 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
MECP2-211ENST00000496908 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
MECP2-211ENST00000496908 SOGA1O94964 1423 aa24.98■■□□□ 1.59
MECP2-211ENST00000496908 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
MECP2-211ENST00000496908 CHD1O14646 1710 aa24.92■■□□□ 1.58
MECP2-211ENST00000496908 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
MECP2-211ENST00000496908 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
MECP2-211ENST00000496908 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
MECP2-211ENST00000496908 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
MECP2-211ENST00000496908 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
MECP2-211ENST00000496908 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
MECP2-211ENST00000496908 FBLN2P98095 1184 aa24.79■■□□□ 1.56
MECP2-211ENST00000496908 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
MECP2-211ENST00000496908 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
MECP2-211ENST00000496908 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
MECP2-211ENST00000496908 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
MECP2-211ENST00000496908 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
MECP2-211ENST00000496908 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
MECP2-211ENST00000496908 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
MECP2-211ENST00000496908 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
MECP2-211ENST00000496908 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
MECP2-211ENST00000496908 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
MECP2-211ENST00000496908 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
MECP2-211ENST00000496908 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
MECP2-211ENST00000496908 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
MECP2-211ENST00000496908 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
MECP2-211ENST00000496908 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
MECP2-211ENST00000496908 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
MECP2-211ENST00000496908 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
MECP2-211ENST00000496908 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
MECP2-211ENST00000496908 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
MECP2-211ENST00000496908 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
MECP2-211ENST00000496908 NUP160Q12769 1436 aa24.36■■□□□ 1.49
MECP2-211ENST00000496908 ERCC6L2Q5T890 1561 aa24.3■■□□□ 1.48
MECP2-211ENST00000496908 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
MECP2-211ENST00000496908 TRHP20396 242 aaPredicted RBP24.19■■□□□ 1.46
MECP2-211ENST00000496908 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
MECP2-211ENST00000496908 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
MECP2-211ENST00000496908 IGF1RP08069 1367 aa24.14■■□□□ 1.45
MECP2-211ENST00000496908 PRG4Q92954 1404 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms