RNA–Protein interactions for RNA: ENST00000403432.5

PUM2-204, Transcript of pumilio RNA binding family member 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PUM2, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM2-204ENST00000403432 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
PUM2-204ENST00000403432 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
PUM2-204ENST00000403432 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
PUM2-204ENST00000403432 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
PUM2-204ENST00000403432 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
PUM2-204ENST00000403432 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
PUM2-204ENST00000403432 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
PUM2-204ENST00000403432 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
PUM2-204ENST00000403432 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
PUM2-204ENST00000403432 ABCC9O60706 1549 aa19.34■□□□□ 0.69
PUM2-204ENST00000403432 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
PUM2-204ENST00000403432 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
PUM2-204ENST00000403432 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
PUM2-204ENST00000403432 RB1CC1Q8TDY2 1594 aa19.04■□□□□ 0.64
PUM2-204ENST00000403432 HRCP23327 699 aa19■□□□□ 0.63
PUM2-204ENST00000403432 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
PUM2-204ENST00000403432 NACADO15069 1562 aa18.92■□□□□ 0.62
PUM2-204ENST00000403432 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
PUM2-204ENST00000403432 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
PUM2-204ENST00000403432 WIZO95785 1651 aa18.8■□□□□ 0.6
PUM2-204ENST00000403432 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
PUM2-204ENST00000403432 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
PUM2-204ENST00000403432 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
PUM2-204ENST00000403432 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
PUM2-204ENST00000403432 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
PUM2-204ENST00000403432 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
PUM2-204ENST00000403432 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
PUM2-204ENST00000403432 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
PUM2-204ENST00000403432 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
PUM2-204ENST00000403432 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PUM2-204ENST00000403432 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
PUM2-204ENST00000403432 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
PUM2-204ENST00000403432 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
PUM2-204ENST00000403432 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
PUM2-204ENST00000403432 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
PUM2-204ENST00000403432 SOGA1O94964 1423 aa18.13■□□□□ 0.49
PUM2-204ENST00000403432 RUSC2Q8N2Y8 1516 aa18.11■□□□□ 0.49
PUM2-204ENST00000403432 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
PUM2-204ENST00000403432 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
PUM2-204ENST00000403432 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
PUM2-204ENST00000403432 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
PUM2-204ENST00000403432 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.465e-6■■■■■ 29.2
PUM2-204ENST00000403432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
PUM2-204ENST00000403432 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
PUM2-204ENST00000403432 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
PUM2-204ENST00000403432 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.46
PUM2-204ENST00000403432 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
PUM2-204ENST00000403432 EEA1Q15075 1411 aa17.85■□□□□ 0.45
PUM2-204ENST00000403432 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
PUM2-204ENST00000403432 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
PUM2-204ENST00000403432 KIF21BO75037 1637 aa17.78■□□□□ 0.44
PUM2-204ENST00000403432 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
PUM2-204ENST00000403432 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
PUM2-204ENST00000403432 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
PUM2-204ENST00000403432 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
PUM2-204ENST00000403432 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
PUM2-204ENST00000403432 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
PUM2-204ENST00000403432 CLIP1P30622 1438 aa17.61■□□□□ 0.41
PUM2-204ENST00000403432 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
PUM2-204ENST00000403432 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
PUM2-204ENST00000403432 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
PUM2-204ENST00000403432 CUX1P39880 1505 aa17.54■□□□□ 0.4
PUM2-204ENST00000403432 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
PUM2-204ENST00000403432 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
PUM2-204ENST00000403432 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
PUM2-204ENST00000403432 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
PUM2-204ENST00000403432 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
PUM2-204ENST00000403432 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
PUM2-204ENST00000403432 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
PUM2-204ENST00000403432 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
PUM2-204ENST00000403432 CFTRP13569 1480 aa17.4■□□□□ 0.38
PUM2-204ENST00000403432 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
PUM2-204ENST00000403432 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
PUM2-204ENST00000403432 KANK4Q5T7N3 995 aaPredicted RBP17.32■□□□□ 0.36
PUM2-204ENST00000403432 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
PUM2-204ENST00000403432 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
PUM2-204ENST00000403432 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.35
PUM2-204ENST00000403432 APLP2Q06481 763 aa17.24■□□□□ 0.35
PUM2-204ENST00000403432 CUX2O14529 1486 aa17.18■□□□□ 0.34
PUM2-204ENST00000403432 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
PUM2-204ENST00000403432 IGF1RP08069 1367 aa17.17■□□□□ 0.34
PUM2-204ENST00000403432 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
PUM2-204ENST00000403432 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
PUM2-204ENST00000403432 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
PUM2-204ENST00000403432 MIER1Q8N108 512 aa17.14■□□□□ 0.33
PUM2-204ENST00000403432 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
PUM2-204ENST00000403432 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
PUM2-204ENST00000403432 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
PUM2-204ENST00000403432 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
PUM2-204ENST00000403432 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
PUM2-204ENST00000403432 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
PUM2-204ENST00000403432 CCNB3Q8WWL7 1395 aa17.04■□□□□ 0.32
PUM2-204ENST00000403432 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
PUM2-204ENST00000403432 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
PUM2-204ENST00000403432 NESP48681 1621 aa17.02■□□□□ 0.32
PUM2-204ENST00000403432 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.31
PUM2-204ENST00000403432 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
PUM2-204ENST00000403432 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
PUM2-204ENST00000403432 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
PUM2-204ENST00000403432 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms