RNA–Protein interactions for RNA: ENST00000488044.5

SH3YL1-224, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 4

Gene SH3YL1, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-224ENST00000488044 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
SH3YL1-224ENST00000488044 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
SH3YL1-224ENST00000488044 ABCC9O60706 1549 aa33.94■■■■□ 3.02
SH3YL1-224ENST00000488044 NACADO15069 1562 aa32.72■■■□□ 2.83
SH3YL1-224ENST00000488044 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
SH3YL1-224ENST00000488044 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
SH3YL1-224ENST00000488044 MYO15BQ96JP2 1530 aa32.63■■■□□ 2.81
SH3YL1-224ENST00000488044 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
SH3YL1-224ENST00000488044 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.79
SH3YL1-224ENST00000488044 UNC13AQ9UPW8 1703 aa32.04■■■□□ 2.72
SH3YL1-224ENST00000488044 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
SH3YL1-224ENST00000488044 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
SH3YL1-224ENST00000488044 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
SH3YL1-224ENST00000488044 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
SH3YL1-224ENST00000488044 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
SH3YL1-224ENST00000488044 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
SH3YL1-224ENST00000488044 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
SH3YL1-224ENST00000488044 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.51
SH3YL1-224ENST00000488044 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
SH3YL1-224ENST00000488044 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
SH3YL1-224ENST00000488044 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
SH3YL1-224ENST00000488044 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
SH3YL1-224ENST00000488044 ATAD2BQ9ULI0 1458 aa30.23■■■□□ 2.43
SH3YL1-224ENST00000488044 MROH2BQ7Z745 1585 aa30.23■■■□□ 2.43
SH3YL1-224ENST00000488044 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
SH3YL1-224ENST00000488044 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
SH3YL1-224ENST00000488044 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
SH3YL1-224ENST00000488044 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
SH3YL1-224ENST00000488044 RSF1Q96T23 1441 aaPredicted RBP29.9■■■□□ 2.38
SH3YL1-224ENST00000488044 WIZO95785 1651 aa29.88■■■□□ 2.37
SH3YL1-224ENST00000488044 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
SH3YL1-224ENST00000488044 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
SH3YL1-224ENST00000488044 NESP48681 1621 aa29.44■■■□□ 2.3
SH3YL1-224ENST00000488044 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
SH3YL1-224ENST00000488044 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
SH3YL1-224ENST00000488044 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
SH3YL1-224ENST00000488044 CFTRP13569 1480 aa29.18■■■□□ 2.26
SH3YL1-224ENST00000488044 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
SH3YL1-224ENST00000488044 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
SH3YL1-224ENST00000488044 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
SH3YL1-224ENST00000488044 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
SH3YL1-224ENST00000488044 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
SH3YL1-224ENST00000488044 CUX2O14529 1486 aa28.95■■■□□ 2.22
SH3YL1-224ENST00000488044 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
SH3YL1-224ENST00000488044 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
SH3YL1-224ENST00000488044 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
SH3YL1-224ENST00000488044 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
SH3YL1-224ENST00000488044 WDR62O43379 1518 aa28.81■■■□□ 2.2
SH3YL1-224ENST00000488044 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
SH3YL1-224ENST00000488044 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
SH3YL1-224ENST00000488044 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
SH3YL1-224ENST00000488044 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
SH3YL1-224ENST00000488044 CUX1P39880 1505 aa28.35■■■□□ 2.13
SH3YL1-224ENST00000488044 IFT140Q96RY7 1462 aa28.29■■■□□ 2.12
SH3YL1-224ENST00000488044 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
SH3YL1-224ENST00000488044 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
SH3YL1-224ENST00000488044 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
SH3YL1-224ENST00000488044 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
SH3YL1-224ENST00000488044 RAD54L2Q9Y4B4 1467 aa28.14■■■□□ 2.09
SH3YL1-224ENST00000488044 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
SH3YL1-224ENST00000488044 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
SH3YL1-224ENST00000488044 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
SH3YL1-224ENST00000488044 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
SH3YL1-224ENST00000488044 SOGA1O94964 1423 aa28.1■■■□□ 2.09
SH3YL1-224ENST00000488044 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
SH3YL1-224ENST00000488044 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
SH3YL1-224ENST00000488044 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.07
SH3YL1-224ENST00000488044 DNAJC5Q9H3Z4 198 aa27.97■■■□□ 2.07
SH3YL1-224ENST00000488044 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
SH3YL1-224ENST00000488044 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
SH3YL1-224ENST00000488044 ABCA5Q8WWZ7 1642 aa27.88■■■□□ 2.05
SH3YL1-224ENST00000488044 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
SH3YL1-224ENST00000488044 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
SH3YL1-224ENST00000488044 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
SH3YL1-224ENST00000488044 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
SH3YL1-224ENST00000488044 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
SH3YL1-224ENST00000488044 CHD1O14646 1710 aa27.69■■■□□ 2.02
SH3YL1-224ENST00000488044 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
SH3YL1-224ENST00000488044 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
SH3YL1-224ENST00000488044 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
SH3YL1-224ENST00000488044 ADAMTS12P58397 1594 aa27.57■■■□□ 2
SH3YL1-224ENST00000488044 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
SH3YL1-224ENST00000488044 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
SH3YL1-224ENST00000488044 FBLN2P98095 1184 aa27.48■■□□□ 1.99
SH3YL1-224ENST00000488044 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
SH3YL1-224ENST00000488044 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
SH3YL1-224ENST00000488044 IGF1RP08069 1367 aa27.46■■□□□ 1.99
SH3YL1-224ENST00000488044 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
SH3YL1-224ENST00000488044 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
SH3YL1-224ENST00000488044 NUP160Q12769 1436 aa27.38■■□□□ 1.97
SH3YL1-224ENST00000488044 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
SH3YL1-224ENST00000488044 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
SH3YL1-224ENST00000488044 CUL7Q14999 1698 aa27.35■■□□□ 1.97
SH3YL1-224ENST00000488044 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
SH3YL1-224ENST00000488044 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
SH3YL1-224ENST00000488044 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
SH3YL1-224ENST00000488044 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
SH3YL1-224ENST00000488044 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
SH3YL1-224ENST00000488044 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
SH3YL1-224ENST00000488044 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms