Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 MVD-213ENST00000566636 863 ntTSL 322.67■■□□□ 1.222e-14■□□□□ 8.9
FTOQ9C0B1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.75■■□□□ 1.072e-14■□□□□ 8.9
FTOQ9C0B1 LSS-204ENST00000450351 853 ntTSL 520.35■□□□□ 0.856e-10■□□□□ 8.9
FTOQ9C0B1 MTSS1L-203ENST00000576338 518 ntTSL 319.88■□□□□ 0.776e-10■□□□□ 8.9
FTOQ9C0B1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.96■□□□□ 0.472e-14■□□□□ 8.9
FTOQ9C0B1 FADS2-204ENST00000517312 588 ntTSL 517.14■□□□□ 0.332e-14■□□□□ 8.9
FTOQ9C0B1 KHSRP-210ENST00000599395 837 ntTSL 514.93□□□□□ -0.022e-14■□□□□ 8.9
FTOQ9C0B1 FADS2-206ENST00000518606 510 ntTSL 48.13□□□□□ -1.112e-14■□□□□ 8.9
FTOQ9C0B1 NAP1L1-220ENST00000551524 460 ntTSL 24.23□□□□□ -1.736e-10■□□□□ 8.9
FTOQ9C0B1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.74■□□□□ 0.755e-17■□□□□ 8.9
FTOQ9C0B1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.585e-17■□□□□ 8.9
FTOQ9C0B1 HSP90B1-203ENST00000548462 3032 ntTSL 213.81□□□□□ -0.25e-17■□□□□ 8.9
FTOQ9C0B1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.742e-8■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.235e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-217ENST00000540382 1677 ntTSL 528.97■■■□□ 2.235e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-218ENST00000540708 1782 ntTSL 228.71■■■□□ 2.195e-6■□□□□ 8.8
FTOQ9C0B1 ZNF428-202ENST00000595304 569 ntTSL 227.9■■■□□ 2.062e-8■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.83■■■□□ 2.055e-6■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.32■■□□□ 1.962e-8■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-219ENST00000542099 1119 ntTSL 327.23■■□□□ 1.955e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.825e-6■□□□□ 8.8
FTOQ9C0B1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.85e-6■□□□□ 8.8
FTOQ9C0B1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.782e-8■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-209ENST00000442210 716 ntTSL 325.8■■□□□ 1.725e-6■□□□□ 8.8
FTOQ9C0B1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.685e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-202ENST00000502379 679 ntTSL 225.53■■□□□ 1.685e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.655e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)25.24■■□□□ 1.635e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-212ENST00000509632 583 ntTSL 425.05■■□□□ 1.65e-6■□□□□ 8.8
FTOQ9C0B1 PRDM4-205ENST00000550376 2591 ntTSL 1 (best)24.62■■□□□ 1.535e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.455e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-214ENST00000536502 1273 ntTSL 223.96■■□□□ 1.435e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.415e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.71■■□□□ 1.395e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.66■■□□□ 1.385e-6■□□□□ 8.8
FTOQ9C0B1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.332e-8■□□□□ 8.8
FTOQ9C0B1 PRDM4-203ENST00000547268 585 ntTSL 523.23■■□□□ 1.315e-6■□□□□ 8.8
FTOQ9C0B1 FLOT1-202ENST00000413165 856 ntTSL 523.09■■□□□ 1.295e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.295e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-206ENST00000505555 2230 ntTSL 222.95■■□□□ 1.265e-6■□□□□ 8.8
FTOQ9C0B1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.55■■□□□ 1.25e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-215ENST00000539576 1684 ntTSL 522.51■■□□□ 1.195e-6■□□□□ 8.8
FTOQ9C0B1 TMEM41A-202ENST00000382227 541 ntTSL 421.81■■□□□ 1.085e-6■□□□□ 8.8
FTOQ9C0B1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.75■■□□□ 1.075e-6■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.062e-8■□□□□ 8.8
FTOQ9C0B1 ZNF428-203ENST00000598676 827 ntTSL 521.62■■□□□ 1.052e-8■□□□□ 8.8
FTOQ9C0B1 COPS6-203ENST00000419210 218 ntTSL 321.59■■□□□ 1.052e-8■□□□□ 8.8
FTOQ9C0B1 COPS6-207ENST00000472107 835 ntTSL 221.58■■□□□ 1.052e-8■□□□□ 8.8
FTOQ9C0B1 FLOT1-212ENST00000487376 1583 ntTSL 521.55■■□□□ 1.045e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.08■□□□□ 0.975e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-203ENST00000392433 1370 ntTSL 220.96■□□□□ 0.955e-6■□□□□ 8.8
FTOQ9C0B1 COPS6-206ENST00000468499 745 ntTSL 320.93■□□□□ 0.942e-8■□□□□ 8.8
FTOQ9C0B1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.84■□□□□ 0.935e-6■□□□□ 8.8
FTOQ9C0B1 COPS6-210ENST00000496358 610 ntTSL 220.76■□□□□ 0.912e-8■□□□□ 8.8
FTOQ9C0B1 TMEM41A-205ENST00000467520 563 ntTSL 420.74■□□□□ 0.915e-6■□□□□ 8.8
FTOQ9C0B1 JAGN1-202ENST00000489724 342 ntTSL 320.71■□□□□ 0.915e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-211ENST00000601533 573 ntTSL 220.4■□□□□ 0.865e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-207ENST00000596853 593 ntTSL 420.3■□□□□ 0.845e-6■□□□□ 8.8
FTOQ9C0B1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.795e-6■□□□□ 8.8
FTOQ9C0B1 SDHA-205ENST00000504824 1430 ntTSL 519.89■□□□□ 0.775e-6■□□□□ 8.8
FTOQ9C0B1 PUS7-204ENST00000481939 2436 ntTSL 519.8■□□□□ 0.765e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-212ENST00000456762 796 ntAPPRIS ALT2 TSL 219.59■□□□□ 0.735e-6■□□□□ 8.8
FTOQ9C0B1 COPS6-205ENST00000465027 1171 ntTSL 1 (best)19.56■□□□□ 0.722e-8■□□□□ 8.8
FTOQ9C0B1 DNAJB1-203ENST00000594099 995 ntTSL 419.18■□□□□ 0.665e-6■□□□□ 8.8
FTOQ9C0B1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.69■□□□□ 0.585e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.485e-6■□□□□ 8.8
FTOQ9C0B1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.475e-6■□□□□ 8.8
FTOQ9C0B1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.462e-8■□□□□ 8.8
FTOQ9C0B1 FLOT1-209ENST00000476729 562 ntTSL 217.85■□□□□ 0.455e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.45e-6■□□□□ 8.8
FTOQ9C0B1 TMEM41A-204ENST00000467061 4921 ntTSL 217.28■□□□□ 0.365e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-206ENST00000596075 573 ntTSL 417.01■□□□□ 0.315e-6■□□□□ 8.8
FTOQ9C0B1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.315e-6■□□□□ 8.8
FTOQ9C0B1 TMEM41A-206ENST00000475480 1035 ntTSL 316.6■□□□□ 0.255e-6■□□□□ 8.8
FTOQ9C0B1 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.195e-6■□□□□ 8.8
FTOQ9C0B1 FLOT1-205ENST00000438162 888 ntTSL 515.44■□□□□ 0.065e-6■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-207ENST00000506959 547 ntTSL 514.97□□□□□ -0.012e-8■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-209ENST00000510226 560 ntTSL 414.97□□□□□ -0.012e-8■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-206ENST00000413381 799 ntAPPRIS ALT2 TSL 514.9□□□□□ -0.025e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-209ENST00000598692 567 ntTSL 214.76□□□□□ -0.055e-6■□□□□ 8.8
FTOQ9C0B1 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.115e-6■□□□□ 8.8
FTOQ9C0B1 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.92□□□□□ -0.185e-6■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-205ENST00000504949 1511 ntTSL 213.53□□□□□ -0.242e-8■□□□□ 8.8
FTOQ9C0B1 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.375e-6■□□□□ 8.8
FTOQ9C0B1 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC12.57□□□□□ -0.45e-6■□□□□ 8.8
FTOQ9C0B1 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.525e-6■□□□□ 8.8
FTOQ9C0B1 RHOBTB3-216ENST00000515852 575 ntTSL 410.81□□□□□ -0.682e-8■□□□□ 8.8
FTOQ9C0B1 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC10.04□□□□□ -0.85e-6■□□□□ 8.8
FTOQ9C0B1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.365e-6■□□□□ 8.8
FTOQ9C0B1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.44□□□□□ -1.385e-6■□□□□ 8.8
FTOQ9C0B1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.425e-6■□□□□ 8.8
FTOQ9C0B1 DNAJB1-205ENST00000595992 601 ntTSL 26.11□□□□□ -1.435e-6■□□□□ 8.8
FTOQ9C0B1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.87■■□□□ 1.411e-8■□□□□ 8.8
FTOQ9C0B1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.411e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-209ENST00000476545 815 ntTSL 314.98□□□□□ -0.011e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC14.21□□□□□ -0.141e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-212ENST00000482069 539 ntTSL 312.81□□□□□ -0.361e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-206ENST00000465692 778 ntTSL 212.31□□□□□ -0.441e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-211ENST00000480662 711 ntTSL 210.71□□□□□ -0.691e-7■□□□□ 8.8
FTOQ9C0B1 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.831e-7■□□□□ 8.8
Retrieved 100 of 7,068 protein–RNA pairs in 224 ms