RNA–Protein interactions for RNA: ENST00000467061.1

TMEM41A-204, Transcript of transmembrane protein 41A, humanhuman

TSL 2

Gene TMEM41A, Length 4,921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-204ENST00000467061 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
TMEM41A-204ENST00000467061 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
TMEM41A-204ENST00000467061 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
TMEM41A-204ENST00000467061 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
TMEM41A-204ENST00000467061 APLP2Q06481 763 aa24.54■■□□□ 1.52
TMEM41A-204ENST00000467061 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
TMEM41A-204ENST00000467061 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
TMEM41A-204ENST00000467061 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
TMEM41A-204ENST00000467061 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
TMEM41A-204ENST00000467061 FAM9AQ8IZU1 332 aaPredicted RBP24.3■■□□□ 1.48
TMEM41A-204ENST00000467061 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
TMEM41A-204ENST00000467061 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
TMEM41A-204ENST00000467061 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
TMEM41A-204ENST00000467061 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
TMEM41A-204ENST00000467061 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
TMEM41A-204ENST00000467061 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
TMEM41A-204ENST00000467061 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
TMEM41A-204ENST00000467061 HRCP23327 699 aa23.53■■□□□ 1.36
TMEM41A-204ENST00000467061 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
TMEM41A-204ENST00000467061 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
TMEM41A-204ENST00000467061 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
TMEM41A-204ENST00000467061 NEFLP07196 543 aa23.2■■□□□ 1.3
TMEM41A-204ENST00000467061 MYT1Q01538 1121 aa23.19■■□□□ 1.3
TMEM41A-204ENST00000467061 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
TMEM41A-204ENST00000467061 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
TMEM41A-204ENST00000467061 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
TMEM41A-204ENST00000467061 HNRNPUL2Q1KMD3 747 aaKnown RBP22.83■■□□□ 1.24
TMEM41A-204ENST00000467061 ITGAEP38570 1179 aa22.76■■□□□ 1.23
TMEM41A-204ENST00000467061 ABCC9O60706 1549 aa22.73■■□□□ 1.23
TMEM41A-204ENST00000467061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
TMEM41A-204ENST00000467061 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
TMEM41A-204ENST00000467061 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.22
TMEM41A-204ENST00000467061 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
TMEM41A-204ENST00000467061 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
TMEM41A-204ENST00000467061 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
TMEM41A-204ENST00000467061 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
TMEM41A-204ENST00000467061 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
TMEM41A-204ENST00000467061 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
TMEM41A-204ENST00000467061 DAXXQ9UER7 740 aaPredicted RBP22.29■■□□□ 1.16
TMEM41A-204ENST00000467061 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
TMEM41A-204ENST00000467061 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
TMEM41A-204ENST00000467061 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
TMEM41A-204ENST00000467061 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
TMEM41A-204ENST00000467061 ANP32CO43423 234 aa22.12■■□□□ 1.13
TMEM41A-204ENST00000467061 GTF3C3Q9Y5Q9 886 aa22.12■■□□□ 1.13
TMEM41A-204ENST00000467061 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
TMEM41A-204ENST00000467061 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
TMEM41A-204ENST00000467061 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
TMEM41A-204ENST00000467061 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
TMEM41A-204ENST00000467061 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
TMEM41A-204ENST00000467061 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
TMEM41A-204ENST00000467061 EEA1Q15075 1411 aa21.84■■□□□ 1.09
TMEM41A-204ENST00000467061 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
TMEM41A-204ENST00000467061 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
TMEM41A-204ENST00000467061 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
TMEM41A-204ENST00000467061 ZNF326Q5BKZ1 582 aaKnown RBP21.75■■□□□ 1.07
TMEM41A-204ENST00000467061 BCANQ96GW7 911 aa21.75■■□□□ 1.07
TMEM41A-204ENST00000467061 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
TMEM41A-204ENST00000467061 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
TMEM41A-204ENST00000467061 NACADO15069 1562 aa21.69■■□□□ 1.06
TMEM41A-204ENST00000467061 FBLN2P98095 1184 aa21.68■■□□□ 1.06
TMEM41A-204ENST00000467061 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
TMEM41A-204ENST00000467061 CLIP1P30622 1438 aa21.66■■□□□ 1.06
TMEM41A-204ENST00000467061 GOLGA3Q08378 1498 aa21.62■■□□□ 1.05
TMEM41A-204ENST00000467061 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
TMEM41A-204ENST00000467061 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
TMEM41A-204ENST00000467061 ZNF777Q9ULD5 760 aaPredicted RBP21.5■■□□□ 1.03
TMEM41A-204ENST00000467061 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
TMEM41A-204ENST00000467061 ARID3CA6NKF2 412 aa21.47■■□□□ 1.03
TMEM41A-204ENST00000467061 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
TMEM41A-204ENST00000467061 ANP32AP39687 249 aaKnown RBP21.45■■□□□ 1.02
TMEM41A-204ENST00000467061 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
TMEM41A-204ENST00000467061 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
TMEM41A-204ENST00000467061 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
TMEM41A-204ENST00000467061 FKBP8Q14318 412 aa21.42■■□□□ 1.02
TMEM41A-204ENST00000467061 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
TMEM41A-204ENST00000467061 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
TMEM41A-204ENST00000467061 NEFMP07197 916 aa21.41■■□□□ 1.02
TMEM41A-204ENST00000467061 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
TMEM41A-204ENST00000467061 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
TMEM41A-204ENST00000467061 KIF27Q86VH2 1401 aa21.33■■□□□ 1
TMEM41A-204ENST00000467061 MIER1Q8N108 512 aa21.31■■□□□ 1
TMEM41A-204ENST00000467061 TSPY4P0CV99 314 aa21.27■■□□□ 1
TMEM41A-204ENST00000467061 TSPY10P0CW01 314 aa21.27■■□□□ 1
TMEM41A-204ENST00000467061 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
TMEM41A-204ENST00000467061 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
TMEM41A-204ENST00000467061 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
TMEM41A-204ENST00000467061 EIF4G2P78344 907 aaKnown RBP eCLIP21.22■□□□□ 0.99
TMEM41A-204ENST00000467061 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
TMEM41A-204ENST00000467061 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
TMEM41A-204ENST00000467061 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
TMEM41A-204ENST00000467061 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.14■□□□□ 0.98
TMEM41A-204ENST00000467061 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
TMEM41A-204ENST00000467061 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
TMEM41A-204ENST00000467061 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
TMEM41A-204ENST00000467061 UPF2Q9HAU5 1272 aaKnown RBP21.08■□□□□ 0.97
TMEM41A-204ENST00000467061 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.97
TMEM41A-204ENST00000467061 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
TMEM41A-204ENST00000467061 TIMELESSQ9UNS1 1208 aa21.06■□□□□ 0.96
TMEM41A-204ENST00000467061 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms