RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
SDHA-205ENST00000504824 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
SDHA-205ENST00000504824 ABCC9O60706 1549 aa38.11■■■■□ 3.69
SDHA-205ENST00000504824 RB1CC1Q8TDY2 1594 aa36.35■■■■□ 3.41
SDHA-205ENST00000504824 NACADO15069 1562 aa36.09■■■■□ 3.37
SDHA-205ENST00000504824 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
SDHA-205ENST00000504824 MYO15BQ96JP2 1530 aa35.59■■■■□ 3.29
SDHA-205ENST00000504824 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
SDHA-205ENST00000504824 PABPN1Q86U42 306 aaKnown RBP eCLIP35.46■■■■□ 3.27
SDHA-205ENST00000504824 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
SDHA-205ENST00000504824 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
SDHA-205ENST00000504824 BICRAQ9NZM4 1560 aa35.16■■■■□ 3.22
SDHA-205ENST00000504824 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
SDHA-205ENST00000504824 SHROOM4Q9ULL8 1493 aa34.82■■■■□ 3.16
SDHA-205ENST00000504824 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
SDHA-205ENST00000504824 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
SDHA-205ENST00000504824 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
SDHA-205ENST00000504824 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
SDHA-205ENST00000504824 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
SDHA-205ENST00000504824 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
SDHA-205ENST00000504824 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
SDHA-205ENST00000504824 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
SDHA-205ENST00000504824 HMGXB3Q12766 1538 aa33.07■■■□□ 2.88
SDHA-205ENST00000504824 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
SDHA-205ENST00000504824 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
SDHA-205ENST00000504824 BAZ1BQ9UIG0 1483 aaKnown RBP32.92■■■□□ 2.86
SDHA-205ENST00000504824 CUX2O14529 1486 aa32.85■■■□□ 2.85
SDHA-205ENST00000504824 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
SDHA-205ENST00000504824 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
SDHA-205ENST00000504824 NESP48681 1621 aa32.7■■■□□ 2.83
SDHA-205ENST00000504824 DNAJC5Q9H3Z4 198 aa32.68■■■□□ 2.82
SDHA-205ENST00000504824 LAMC3Q9Y6N6 1575 aa32.57■■■□□ 2.8
SDHA-205ENST00000504824 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
SDHA-205ENST00000504824 THOC2Q8NI27 1593 aaKnown RBP32.39■■■□□ 2.78
SDHA-205ENST00000504824 WIZO95785 1651 aa32.38■■■□□ 2.77
SDHA-205ENST00000504824 KIF21AQ7Z4S6 1674 aa32.33■■■□□ 2.77
SDHA-205ENST00000504824 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
SDHA-205ENST00000504824 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
SDHA-205ENST00000504824 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
SDHA-205ENST00000504824 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
SDHA-205ENST00000504824 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
SDHA-205ENST00000504824 WDR62O43379 1518 aa31.98■■■□□ 2.71
SDHA-205ENST00000504824 FANCD2Q9BXW9 1451 aa31.93■■■□□ 2.7
SDHA-205ENST00000504824 CFTRP13569 1480 aa31.91■■■□□ 2.7
SDHA-205ENST00000504824 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
SDHA-205ENST00000504824 URB2Q14146 1524 aaKnown RBP31.62■■■□□ 2.65
SDHA-205ENST00000504824 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
SDHA-205ENST00000504824 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
SDHA-205ENST00000504824 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
SDHA-205ENST00000504824 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
SDHA-205ENST00000504824 ABCC8Q09428 1581 aa31.33■■■□□ 2.61
SDHA-205ENST00000504824 TOPBP1Q92547 1522 aa31.32■■■□□ 2.6
SDHA-205ENST00000504824 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
SDHA-205ENST00000504824 ZNF608Q9ULD9 1512 aaPredicted RBP31.21■■■□□ 2.59
SDHA-205ENST00000504824 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
SDHA-205ENST00000504824 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
SDHA-205ENST00000504824 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
SDHA-205ENST00000504824 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
SDHA-205ENST00000504824 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.551e-7■■■■■ 30.9
SDHA-205ENST00000504824 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
SDHA-205ENST00000504824 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
SDHA-205ENST00000504824 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
SDHA-205ENST00000504824 SOGA1O94964 1423 aa30.89■■■□□ 2.53
SDHA-205ENST00000504824 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
SDHA-205ENST00000504824 CHD1O14646 1710 aa30.86■■■□□ 2.53
SDHA-205ENST00000504824 FBLN2P98095 1184 aa30.84■■■□□ 2.53
SDHA-205ENST00000504824 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
SDHA-205ENST00000504824 ARHGEF11O15085 1522 aa30.83■■■□□ 2.53
SDHA-205ENST00000504824 TDRD9Q8NDG6 1382 aaKnown RBP30.8■■■□□ 2.52
SDHA-205ENST00000504824 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
SDHA-205ENST00000504824 CUX1P39880 1505 aa30.78■■■□□ 2.52
SDHA-205ENST00000504824 SNAPC4Q5SXM2 1469 aa30.68■■■□□ 2.5
SDHA-205ENST00000504824 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
SDHA-205ENST00000504824 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
SDHA-205ENST00000504824 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
SDHA-205ENST00000504824 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
SDHA-205ENST00000504824 SYNJ1O43426 1573 aa30.55■■■□□ 2.48
SDHA-205ENST00000504824 GAPVD1Q14C86 1478 aa30.52■■■□□ 2.48
SDHA-205ENST00000504824 PBRM1Q86U86 1689 aa30.51■■■□□ 2.47
SDHA-205ENST00000504824 SYNJ2O15056 1496 aa30.51■■■□□ 2.47
SDHA-205ENST00000504824 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
SDHA-205ENST00000504824 ABCA10Q8WWZ4 1543 aa30.48■■■□□ 2.47
SDHA-205ENST00000504824 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
SDHA-205ENST00000504824 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
SDHA-205ENST00000504824 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
SDHA-205ENST00000504824 BIVM-ERCC5R4GMW8 1640 aa30.34■■■□□ 2.45
SDHA-205ENST00000504824 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
SDHA-205ENST00000504824 TRHP20396 242 aaPredicted RBP30.32■■■□□ 2.44
SDHA-205ENST00000504824 GRIN2AQ12879 1464 aa30.22■■■□□ 2.43
SDHA-205ENST00000504824 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
SDHA-205ENST00000504824 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
SDHA-205ENST00000504824 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
SDHA-205ENST00000504824 NUP160Q12769 1436 aa30.08■■■□□ 2.41
SDHA-205ENST00000504824 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
SDHA-205ENST00000504824 ERCC6L2Q5T890 1561 aa29.96■■■□□ 2.39
SDHA-205ENST00000504824 SHROOM2Q13796 1616 aa29.94■■■□□ 2.38
SDHA-205ENST00000504824 PRG4Q92954 1404 aaPredicted RBP29.82■■■□□ 2.36
SDHA-205ENST00000504824 KIF27Q86VH2 1401 aa29.8■■■□□ 2.36
SDHA-205ENST00000504824 JPH4Q96JJ6 628 aa29.79■■■□□ 2.36
SDHA-205ENST00000504824 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms